RNA–Protein interactions for RNA: ENST00000220888.9

TRPS1-201, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 5,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-201ENST00000220888 LGALS16A8MUM7 142 aa11.09□□□□□ -0.63
TRPS1-201ENST00000220888 KCNN4O15554 427 aa11.09□□□□□ -0.63
TRPS1-201ENST00000220888 FAM200BP0CF97 657 aa11.09□□□□□ -0.63
TRPS1-201ENST00000220888 ETFBP38117 255 aa11.09□□□□□ -0.63
TRPS1-201ENST00000220888 EPHB3P54753 998 aa11.09□□□□□ -0.63
TRPS1-201ENST00000220888 SLC7A5Q01650 507 aa11.09□□□□□ -0.63
TRPS1-201ENST00000220888 PTPAQ15257 358 aa11.09□□□□□ -0.63
TRPS1-201ENST00000220888 ZRANB3Q5FWF4 1079 aa11.09□□□□□ -0.63
TRPS1-201ENST00000220888 ERO1BQ86YB8 467 aa11.09□□□□□ -0.63
TRPS1-201ENST00000220888 SHCBP1Q8NEM2 672 aa11.09□□□□□ -0.63
TRPS1-201ENST00000220888 RFWD2Q8NHY2 731 aa11.09□□□□□ -0.63
TRPS1-201ENST00000220888 PTPRN2Q92932 1015 aa11.09□□□□□ -0.63
TRPS1-201ENST00000220888 ISCA1Q9BUE6 129 aa11.09□□□□□ -0.63
TRPS1-201ENST00000220888 NFKBIZQ9BYH8 718 aa11.09□□□□□ -0.63
TRPS1-201ENST00000220888 TMEM39BQ9GZU3 492 aa11.09□□□□□ -0.63
TRPS1-201ENST00000220888 CHST12Q9NRB3 414 aa11.09□□□□□ -0.63
TRPS1-201ENST00000220888 FAM49BQ9NUQ9 324 aa11.09□□□□□ -0.63
TRPS1-201ENST00000220888 HSPBP1Q9NZL4 362 aa11.09□□□□□ -0.63
TRPS1-201ENST00000220888 SLC39A10Q9ULF5 831 aa11.09□□□□□ -0.63
TRPS1-201ENST00000220888 TRIM49BA6NDI0 452 aa11.08□□□□□ -0.63
TRPS1-201ENST00000220888 ZC3H11AO75152 810 aaKnown RBP eCLIP11.08□□□□□ -0.63
TRPS1-201ENST00000220888 ASS1P00966 412 aaKnown RBP11.08□□□□□ -0.63
TRPS1-201ENST00000220888 ERVK-10P10266 1014 aa11.08□□□□□ -0.63
TRPS1-201ENST00000220888 ALOX15P16050 662 aaPredicted RBP11.08□□□□□ -0.63
TRPS1-201ENST00000220888 SKOR1P84550 965 aa11.08□□□□□ -0.63
TRPS1-201ENST00000220888 DAB2P98082 770 aa11.08□□□□□ -0.63
TRPS1-201ENST00000220888 ALX1Q15699 326 aa11.08□□□□□ -0.63
TRPS1-201ENST00000220888 ZNF507Q8TCN5 953 aa11.08□□□□□ -0.63
TRPS1-201ENST00000220888 TMEM39AQ9NV64 488 aa11.08□□□□□ -0.63
TRPS1-201ENST00000220888 NDE1Q9NXR1 346 aa11.08□□□□□ -0.63
TRPS1-201ENST00000220888 H2AFY2Q9P0M6 372 aaPredicted RBP11.08□□□□□ -0.63
TRPS1-201ENST00000220888 ADGRL2O95490 1459 aa11.08□□□□□ -0.64
TRPS1-201ENST00000220888 ZNF543Q08ER8 600 aa11.08□□□□□ -0.64
TRPS1-201ENST00000220888 C6orf10Q5SRN2 563 aa11.08□□□□□ -0.64
TRPS1-201ENST00000220888 XRRA1Q6P2D8 792 aa11.08□□□□□ -0.64
TRPS1-201ENST00000220888 CALML6Q8TD86 181 aa11.08□□□□□ -0.64
TRPS1-201ENST00000220888 VMP1Q96GC9 406 aa11.08□□□□□ -0.64
TRPS1-201ENST00000220888 L3MBTL3Q96JM7 780 aaPredicted RBP11.08□□□□□ -0.64
TRPS1-201ENST00000220888 TRIM4Q9C037 500 aa11.08□□□□□ -0.64
TRPS1-201ENST00000220888 MTFR1LQ9H019 292 aa11.08□□□□□ -0.64
TRPS1-201ENST00000220888 TMEM60Q9H2L4 133 aa11.08□□□□□ -0.64
TRPS1-201ENST00000220888 COPS7BQ9H9Q2 264 aaPredicted RBP11.08□□□□□ -0.64
TRPS1-201ENST00000220888 PEG3Q9GZU2 1588 aa11.08□□□□□ -0.64
TRPS1-201ENST00000220888 RPL10AP62906 217 aaKnown RBP11.08□□□□□ -0.64
TRPS1-201ENST00000220888 PHACTR4Q8IZ21 702 aa11.08□□□□□ -0.64
TRPS1-201ENST00000220888 APOL5Q9BWW9 433 aa11.08□□□□□ -0.64
TRPS1-201ENST00000220888 MOV10L1Q9BXT6 1211 aaKnown RBP11.08□□□□□ -0.64
TRPS1-201ENST00000220888 EVA1BQ9NVM1 165 aa11.08□□□□□ -0.64
TRPS1-201ENST00000220888 TRPM5Q9NZQ8 1165 aa11.08□□□□□ -0.64
TRPS1-201ENST00000220888 PRR12Q9ULL5 1215 aa11.08□□□□□ -0.64
TRPS1-201ENST00000220888 UBQLN1Q9UMX0 589 aaKnown RBP11.08□□□□□ -0.64
TRPS1-201ENST00000220888 FLT1P17948 1338 aa11.08□□□□□ -0.64
TRPS1-201ENST00000220888 MFAP3LO75121 409 aa11.08□□□□□ -0.64
TRPS1-201ENST00000220888 IGKV5-2P06315 115 aa11.08□□□□□ -0.64
TRPS1-201ENST00000220888 NMT1P30419 496 aaKnown RBP11.08□□□□□ -0.64
TRPS1-201ENST00000220888 GCKP35557 465 aa11.08□□□□□ -0.64
TRPS1-201ENST00000220888 OCA2Q04671 838 aa11.08□□□□□ -0.64
TRPS1-201ENST00000220888 ZBTB17Q13105 803 aa11.08□□□□□ -0.64
TRPS1-201ENST00000220888 RESTQ13127 1097 aa11.08□□□□□ -0.64
TRPS1-201ENST00000220888 EFHC1Q5JVL4 640 aa11.08□□□□□ -0.64
TRPS1-201ENST00000220888 EPHA10Q5JZY3 1008 aa11.08□□□□□ -0.64
TRPS1-201ENST00000220888 KIRREL3Q8IZU9 778 aa11.08□□□□□ -0.64
TRPS1-201ENST00000220888 SLC25A41Q8N5S1 370 aa11.08□□□□□ -0.64
TRPS1-201ENST00000220888 ATG4CQ96DT6 458 aa11.08□□□□□ -0.64
TRPS1-201ENST00000220888 ELMO2Q96JJ3 720 aa11.08□□□□□ -0.64
TRPS1-201ENST00000220888 SMYD3Q9H7B4 428 aa11.08□□□□□ -0.64
TRPS1-201ENST00000220888 WDR19Q8NEZ3 1342 aa11.08□□□□□ -0.64
TRPS1-201ENST00000220888 ARHGAP31Q2M1Z3 1444 aa11.08□□□□□ -0.64
TRPS1-201ENST00000220888 GYG2O15488 501 aa11.08□□□□□ -0.64
TRPS1-201ENST00000220888 GSNP06396 782 aa11.08□□□□□ -0.64
TRPS1-201ENST00000220888 PLCL1Q15111 1095 aa11.08□□□□□ -0.64
TRPS1-201ENST00000220888 CCDC85BQ15834 202 aaPredicted RBP11.08□□□□□ -0.64
TRPS1-201ENST00000220888 GUF1Q8N442 669 aaKnown RBP11.08□□□□□ -0.64
TRPS1-201ENST00000220888 C10orf53Q8N6V4 93 aa11.08□□□□□ -0.64
TRPS1-201ENST00000220888 BRD8Q9H0E9 1235 aa11.08□□□□□ -0.64
TRPS1-201ENST00000220888 PLA2G4CQ9UP65 541 aa11.08□□□□□ -0.64
TRPS1-201ENST00000220888 AXIN2Q9Y2T1 843 aa11.08□□□□□ -0.64
TRPS1-201ENST00000220888 ANGPT2O15123 496 aa11.07□□□□□ -0.64
TRPS1-201ENST00000220888 CYP26A1O43174 497 aa11.07□□□□□ -0.64
TRPS1-201ENST00000220888 FAM107AO95990 144 aa11.07□□□□□ -0.64
TRPS1-201ENST00000220888 NR1D1P20393 614 aa11.07□□□□□ -0.64
TRPS1-201ENST00000220888 SOAT1P35610 550 aa11.07□□□□□ -0.64
TRPS1-201ENST00000220888 ZNF211Q13398 564 aaPredicted RBP11.07□□□□□ -0.64
TRPS1-201ENST00000220888 TADA1Q96BN2 335 aa11.07□□□□□ -0.64
TRPS1-201ENST00000220888 PAWRQ96IZ0 340 aaKnown RBP11.07□□□□□ -0.64
TRPS1-201ENST00000220888 ITIH6Q6UXX5 1313 aa11.07□□□□□ -0.64
TRPS1-201ENST00000220888 B3GAT3O94766 335 aa11.07□□□□□ -0.64
TRPS1-201ENST00000220888 NCAM1P13591 858 aa11.07□□□□□ -0.64
TRPS1-201ENST00000220888 YY1P25490 414 aa11.07□□□□□ -0.64
TRPS1-201ENST00000220888 TTLL9Q3SXZ7 439 aa11.07□□□□□ -0.64
TRPS1-201ENST00000220888 SLFNL1Q499Z3 407 aa11.07□□□□□ -0.64
TRPS1-201ENST00000220888 DCAF6Q58WW2 860 aa11.07□□□□□ -0.64
TRPS1-201ENST00000220888 RABGAP1LQ5R372 815 aa11.07□□□□□ -0.64
TRPS1-201ENST00000220888 VPS37AQ8NEZ2 397 aa11.07□□□□□ -0.64
TRPS1-201ENST00000220888 THOC1Q96FV9 657 aaKnown RBP11.07□□□□□ -0.64
TRPS1-201ENST00000220888 PRPF18Q99633 342 aaKnown RBP11.07□□□□□ -0.64
TRPS1-201ENST00000220888 SH2D3AQ9BRG2 576 aa11.07□□□□□ -0.64
TRPS1-201ENST00000220888 EMILIN2Q9BXX0 1053 aa11.07□□□□□ -0.64
TRPS1-201ENST00000220888 RRAGCQ9HB90 399 aa11.07□□□□□ -0.64
TRPS1-201ENST00000220888 LY9Q9HBG7 655 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms