RNA–Protein interactions for RNA: ENST00000216605.12

MTHFD1-201, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD1, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-201ENST00000216605 MMEP08473 750 aa9.51□□□□□ -0.89
MTHFD1-201ENST00000216605 TMEM191BP0C7N4 346 aa9.51□□□□□ -0.89
MTHFD1-201ENST00000216605 TNFSF9P41273 254 aa9.51□□□□□ -0.89
MTHFD1-201ENST00000216605 SLC26A2P50443 739 aa9.51□□□□□ -0.89
MTHFD1-201ENST00000216605 PRAMEF19Q5SWL8 479 aa9.51□□□□□ -0.89
MTHFD1-201ENST00000216605 SPATS2Q86XZ4 545 aaKnown RBP9.51□□□□□ -0.89
MTHFD1-201ENST00000216605 PALB2Q86YC2 1186 aa9.51□□□□□ -0.89
MTHFD1-201ENST00000216605 KLHL7Q8IXQ5 586 aa9.51□□□□□ -0.89
MTHFD1-201ENST00000216605 KREMEN1Q96MU8 473 aa9.51□□□□□ -0.89
MTHFD1-201ENST00000216605 GPR88Q9GZN0 384 aa9.51□□□□□ -0.89
MTHFD1-201ENST00000216605 FAM49AQ9H0Q0 323 aaPredicted RBP9.51□□□□□ -0.89
MTHFD1-201ENST00000216605 VTA1Q9NP79 307 aa9.51□□□□□ -0.89
MTHFD1-201ENST00000216605 MCM8Q9UJA3 840 aa9.51□□□□□ -0.89
MTHFD1-201ENST00000216605 TTLL13PA6NNM8 815 aa9.5□□□□□ -0.89
MTHFD1-201ENST00000216605 KIAA0391O15091 583 aaKnown RBP9.5□□□□□ -0.89
MTHFD1-201ENST00000216605 ATMINO43313 823 aaPredicted RBP9.5□□□□□ -0.89
MTHFD1-201ENST00000216605 GAS2O43903 313 aaKnown RBP9.5□□□□□ -0.89
MTHFD1-201ENST00000216605 KIAA0754O94854 1291 aa9.5□□□□□ -0.89
MTHFD1-201ENST00000216605 CD58P19256 250 aa9.5□□□□□ -0.89
MTHFD1-201ENST00000216605 HNRNPH1P31943 449 aaKnown RBP9.5□□□□□ -0.89
MTHFD1-201ENST00000216605 GTF2H1P32780 548 aa9.5□□□□□ -0.89
MTHFD1-201ENST00000216605 GNGT1P63211 74 aa9.5□□□□□ -0.89
MTHFD1-201ENST00000216605 SLC7A5Q01650 507 aa9.5□□□□□ -0.89
MTHFD1-201ENST00000216605 MESDQ14696 234 aa9.5□□□□□ -0.89
MTHFD1-201ENST00000216605 PSMD6Q15008 389 aa9.5□□□□□ -0.89
MTHFD1-201ENST00000216605 C8orf74Q6P047 294 aa9.5□□□□□ -0.89
MTHFD1-201ENST00000216605 SND1Q7KZF4 910 aaKnown RBP eCLIP9.5□□□□□ -0.896e-6■□□□□ 9.2
MTHFD1-201ENST00000216605 SPATA4Q8NEY3 305 aa9.5□□□□□ -0.89
MTHFD1-201ENST00000216605 SLC30A5Q8TAD4 765 aa9.5□□□□□ -0.89
MTHFD1-201ENST00000216605 FBXL18Q96ME1 805 aa9.5□□□□□ -0.89
MTHFD1-201ENST00000216605 TMEM134Q9H6X4 195 aa9.5□□□□□ -0.89
MTHFD1-201ENST00000216605 A0A087WZ62 844 aa9.5□□□□□ -0.89
MTHFD1-201ENST00000216605 A0A0B4J269 797 aa9.5□□□□□ -0.89
MTHFD1-201ENST00000216605 H3BRB1 525 aa9.5□□□□□ -0.89
MTHFD1-201ENST00000216605 B4GALT5O43286 388 aa9.5□□□□□ -0.89
MTHFD1-201ENST00000216605 CYP2B6P20813 491 aa9.5□□□□□ -0.89
MTHFD1-201ENST00000216605 GPC3P51654 580 aa9.5□□□□□ -0.89
MTHFD1-201ENST00000216605 KIF22Q14807 665 aa9.5□□□□□ -0.89
MTHFD1-201ENST00000216605 ZNF792Q3KQV3 632 aa9.5□□□□□ -0.89
MTHFD1-201ENST00000216605 ZNF394Q53GI3 561 aa9.5□□□□□ -0.89
MTHFD1-201ENST00000216605 ATF7IP2Q5U623 682 aa9.5□□□□□ -0.89
MTHFD1-201ENST00000216605 ALS2CLQ60I27 953 aa9.5□□□□□ -0.89
MTHFD1-201ENST00000216605 TMEM270Q6UE05 265 aa9.5□□□□□ -0.89
MTHFD1-201ENST00000216605 NOP9Q86U38 636 aaKnown RBP9.5□□□□□ -0.89
MTHFD1-201ENST00000216605 CREG2Q8IUH2 290 aa9.5□□□□□ -0.89
MTHFD1-201ENST00000216605 TPCN2Q8NHX9 752 aa9.5□□□□□ -0.89
MTHFD1-201ENST00000216605 RFFLQ8WZ73 363 aa9.5□□□□□ -0.89
MTHFD1-201ENST00000216605 ZNF516Q92618 1163 aa9.5□□□□□ -0.89
MTHFD1-201ENST00000216605 ZNF653Q96CK0 615 aa9.5□□□□□ -0.89
MTHFD1-201ENST00000216605 FDXACB1Q9BRP7 624 aaPredicted RBP9.5□□□□□ -0.89
MTHFD1-201ENST00000216605 TUT1Q9H6E5 874 aaKnown RBP9.5□□□□□ -0.89
MTHFD1-201ENST00000216605 LMCD1Q9NZU5 365 aa9.5□□□□□ -0.89
MTHFD1-201ENST00000216605 DIS3Q9Y2L1 958 aaKnown RBP9.5□□□□□ -0.89
MTHFD1-201ENST00000216605 DAAM1Q9Y4D1 1078 aa9.5□□□□□ -0.89
MTHFD1-201ENST00000216605 EME2A4GXA9 379 aaPredicted RBP9.49□□□□□ -0.89
MTHFD1-201ENST00000216605 LGR5O75473 907 aa9.49□□□□□ -0.89
MTHFD1-201ENST00000216605 PYGLP06737 847 aa9.49□□□□□ -0.89
MTHFD1-201ENST00000216605 CYP11B1P15538 503 aa9.49□□□□□ -0.89
MTHFD1-201ENST00000216605 MAPK4P31152 587 aa9.49□□□□□ -0.89
MTHFD1-201ENST00000216605 PHKA2P46019 1235 aa9.49□□□□□ -0.89
MTHFD1-201ENST00000216605 ARHGAP1Q07960 439 aa9.49□□□□□ -0.89
MTHFD1-201ENST00000216605 TMEM62Q0P6H9 643 aa9.49□□□□□ -0.89
MTHFD1-201ENST00000216605 ACVR2BQ13705 512 aa9.49□□□□□ -0.89
MTHFD1-201ENST00000216605 NCOA4Q13772 614 aa9.49□□□□□ -0.89
MTHFD1-201ENST00000216605 MEI1Q5TIA1 1274 aa9.49□□□□□ -0.89
MTHFD1-201ENST00000216605 TDRD10Q5VZ19 366 aaKnown RBP9.49□□□□□ -0.89
MTHFD1-201ENST00000216605 SCARA5Q6ZMJ2 495 aa9.49□□□□□ -0.89
MTHFD1-201ENST00000216605 ILDR2Q71H61 639 aa9.49□□□□□ -0.89
MTHFD1-201ENST00000216605 ADAT2Q7Z6V5 191 aaKnown RBP9.49□□□□□ -0.89
MTHFD1-201ENST00000216605 TAX1BP1Q86VP1 789 aa9.49□□□□□ -0.89
MTHFD1-201ENST00000216605 MMGT1Q8N4V1 131 aa9.49□□□□□ -0.89
MTHFD1-201ENST00000216605 OR5B17Q8NGF7 314 aa9.49□□□□□ -0.89
MTHFD1-201ENST00000216605 AENQ8WTP8 325 aaKnown RBP9.49□□□□□ -0.89
MTHFD1-201ENST00000216605 PTPN18Q99952 460 aa9.49□□□□□ -0.89
MTHFD1-201ENST00000216605 TINF2Q9BSI4 451 aa9.49□□□□□ -0.89
MTHFD1-201ENST00000216605 OGTO15294 1046 aa9.49□□□□□ -0.89
MTHFD1-201ENST00000216605 BUB1BO60566 1050 aaPredicted RBP9.49□□□□□ -0.89
MTHFD1-201ENST00000216605 HSF2BPO75031 334 aa9.49□□□□□ -0.89
MTHFD1-201ENST00000216605 TMEM253P0C7T8 217 aa9.49□□□□□ -0.89
MTHFD1-201ENST00000216605 ZBTB48P10074 688 aaPredicted RBP9.49□□□□□ -0.89
MTHFD1-201ENST00000216605 WNT7BP56706 349 aa9.49□□□□□ -0.89
MTHFD1-201ENST00000216605 GPC5P78333 572 aa9.49□□□□□ -0.89
MTHFD1-201ENST00000216605 TNFAIP2Q03169 654 aa9.49□□□□□ -0.89
MTHFD1-201ENST00000216605 NAA35Q5VZE5 725 aa9.49□□□□□ -0.89
MTHFD1-201ENST00000216605 MICALCLQ6ZW33 695 aa9.49□□□□□ -0.89
MTHFD1-201ENST00000216605 PASD1Q8IV76 773 aa9.49□□□□□ -0.89
MTHFD1-201ENST00000216605 TRIM42Q8IWZ5 723 aa9.49□□□□□ -0.89
MTHFD1-201ENST00000216605 PHC3Q8NDX5 983 aa9.49□□□□□ -0.89
MTHFD1-201ENST00000216605 HELQQ8TDG4 1101 aa9.49□□□□□ -0.89
MTHFD1-201ENST00000216605 EPS8L1Q8TE68 723 aa9.49□□□□□ -0.89
MTHFD1-201ENST00000216605 ARHGEF26Q96DR7 871 aa9.49□□□□□ -0.89
MTHFD1-201ENST00000216605 MAML3Q96JK9 1138 aa9.49□□□□□ -0.89
MTHFD1-201ENST00000216605 YIPF2Q9BWQ6 316 aa9.49□□□□□ -0.89
MTHFD1-201ENST00000216605 MTMR12Q9C0I1 747 aa9.49□□□□□ -0.89
MTHFD1-201ENST00000216605 HAPLN2Q9GZV7 340 aa9.49□□□□□ -0.89
MTHFD1-201ENST00000216605 NXF1Q9UBU9 619 aaKnown RBP9.49□□□□□ -0.89
MTHFD1-201ENST00000216605 KLF15Q9UIH9 416 aa9.49□□□□□ -0.89
MTHFD1-201ENST00000216605 PCDHGC5Q9Y5F6 944 aa9.49□□□□□ -0.89
MTHFD1-201ENST00000216605 NDUFAB1O14561 156 aa9.49□□□□□ -0.89
MTHFD1-201ENST00000216605 SPOPO43791 374 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms