RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 BLOC1S4Q9NUP1 217 aa16.35■□□□□ 0.21
UPK3A-201ENST00000216211 ODF2LQ9ULJ1 636 aa16.35■□□□□ 0.21
UPK3A-201ENST00000216211 SIT1Q9Y3P8 196 aa16.35■□□□□ 0.21
UPK3A-201ENST00000216211 TSC2P49815 1807 aa16.35■□□□□ 0.21
UPK3A-201ENST00000216211 H0YCG3 227 aa16.34■□□□□ 0.21
UPK3A-201ENST00000216211 K7ENM7 598 aa16.34■□□□□ 0.21
UPK3A-201ENST00000216211 CLTAP09496 248 aa16.34■□□□□ 0.21
UPK3A-201ENST00000216211 CEBPBP17676 345 aa16.34■□□□□ 0.21
UPK3A-201ENST00000216211 PTPN2P17706 415 aa16.34■□□□□ 0.21
UPK3A-201ENST00000216211 PLCG1P19174 1290 aa16.34■□□□□ 0.21
UPK3A-201ENST00000216211 UBA7P41226 1012 aa16.34■□□□□ 0.21
UPK3A-201ENST00000216211 LIG4P49917 911 aa16.34■□□□□ 0.21
UPK3A-201ENST00000216211 STARD6P59095 220 aa16.34■□□□□ 0.21
UPK3A-201ENST00000216211 MCM6Q14566 821 aa16.34■□□□□ 0.21
UPK3A-201ENST00000216211 KARSQ15046 597 aaKnown RBP16.34■□□□□ 0.21
UPK3A-201ENST00000216211 ZNF280DQ6N043 979 aa16.34■□□□□ 0.21
UPK3A-201ENST00000216211 TCEAL8Q8IYN2 117 aa16.34■□□□□ 0.21
UPK3A-201ENST00000216211 MYCT1Q8N699 235 aa16.34■□□□□ 0.21
UPK3A-201ENST00000216211 NKD2Q969F2 451 aaPredicted RBP16.34■□□□□ 0.21
UPK3A-201ENST00000216211 KIF12Q96FN5 646 aa16.34■□□□□ 0.21
UPK3A-201ENST00000216211 CORO1BQ9BR76 489 aa16.34■□□□□ 0.21
UPK3A-201ENST00000216211 DLGAP2Q9P1A6 1054 aa16.34■□□□□ 0.21
UPK3A-201ENST00000216211 TBX20Q9UMR3 447 aa16.34■□□□□ 0.21
UPK3A-201ENST00000216211 PCDHB8Q9UN66 801 aa16.34■□□□□ 0.21
UPK3A-201ENST00000216211 INSL5Q9Y5Q6 135 aa16.34■□□□□ 0.21
UPK3A-201ENST00000216211 TTC26A0AVF1 554 aa16.33■□□□□ 0.2
UPK3A-201ENST00000216211 LACTBL1A8MY62 500 aa16.33■□□□□ 0.2
UPK3A-201ENST00000216211 SLC26A4O43511 780 aa16.33■□□□□ 0.2
UPK3A-201ENST00000216211 LRRN2O75325 713 aa16.33■□□□□ 0.2
UPK3A-201ENST00000216211 FAM13AO94988 1023 aa16.33■□□□□ 0.2
UPK3A-201ENST00000216211 GLULP15104 373 aa16.33■□□□□ 0.2
UPK3A-201ENST00000216211 GUCY2FP51841 1108 aa16.33■□□□□ 0.2
UPK3A-201ENST00000216211 PPP2R3AQ06190 1150 aa16.33■□□□□ 0.2
UPK3A-201ENST00000216211 ADCY1Q08828 1119 aa16.33■□□□□ 0.2
UPK3A-201ENST00000216211 SF3A1Q15459 793 aaKnown RBP16.33■□□□□ 0.2
UPK3A-201ENST00000216211 PRSS36Q5K4E3 855 aa16.33■□□□□ 0.2
UPK3A-201ENST00000216211 ZBTB41Q5SVQ8 909 aa16.33■□□□□ 0.2
UPK3A-201ENST00000216211 APPL2Q8NEU8 664 aa16.33■□□□□ 0.2
UPK3A-201ENST00000216211 PJA1Q8NG27 643 aa16.33■□□□□ 0.2
UPK3A-201ENST00000216211 RASSF8Q8NHQ8 419 aa16.33■□□□□ 0.2
UPK3A-201ENST00000216211 RAD54LQ92698 747 aa16.33■□□□□ 0.2
UPK3A-201ENST00000216211 PLA2G2FQ9BZM2 168 aa16.33■□□□□ 0.2
UPK3A-201ENST00000216211 PLEKHA5Q9HAU0 1116 aa16.33■□□□□ 0.2
UPK3A-201ENST00000216211 AVENQ9NQS1 362 aaPredicted RBP16.33■□□□□ 0.2
UPK3A-201ENST00000216211 TICRRQ7Z2Z1 1910 aa16.33■□□□□ 0.2
UPK3A-201ENST00000216211 K7ELQ4 463 aaPredicted RBP16.32■□□□□ 0.2
UPK3A-201ENST00000216211 HNRNPDLO14979 420 aaKnown RBP16.32■□□□□ 0.2
UPK3A-201ENST00000216211 KRT18P05783 430 aaKnown RBP16.32■□□□□ 0.2
UPK3A-201ENST00000216211 CPB1P15086 417 aa16.32■□□□□ 0.2
UPK3A-201ENST00000216211 MARCKSP29966 332 aaPredicted RBP16.32■□□□□ 0.2
UPK3A-201ENST00000216211 LRPAP1P30533 357 aa16.32■□□□□ 0.2
UPK3A-201ENST00000216211 SCN1AP35498 2009 aa16.32■□□□□ 0.2
UPK3A-201ENST00000216211 LONP1P36776 959 aaKnown RBP16.32■□□□□ 0.2
UPK3A-201ENST00000216211 MLF2Q15773 248 aaPredicted RBP16.32■□□□□ 0.2
UPK3A-201ENST00000216211 SLC44A4Q53GD3 710 aa16.32■□□□□ 0.2
UPK3A-201ENST00000216211 TPGS2Q68CL5 300 aa16.32■□□□□ 0.2
UPK3A-201ENST00000216211 RNF19BQ6ZMZ0 732 aa16.32■□□□□ 0.2
UPK3A-201ENST00000216211 WDR87Q6ZQQ6 2873 aa16.32■□□□□ 0.2
UPK3A-201ENST00000216211 BRAPQ7Z569 592 aa16.32■□□□□ 0.2
UPK3A-201ENST00000216211 KCNN1Q92952 543 aa16.32■□□□□ 0.2
UPK3A-201ENST00000216211 TCEAL4Q96EI5 215 aa16.32■□□□□ 0.2
UPK3A-201ENST00000216211 SHDQ96IW2 340 aa16.32■□□□□ 0.2
UPK3A-201ENST00000216211 ZHX3Q9H4I2 956 aa16.32■□□□□ 0.2
UPK3A-201ENST00000216211 PARVGQ9HBI0 331 aa16.32■□□□□ 0.2
UPK3A-201ENST00000216211 GDE1Q9NZC3 331 aa16.32■□□□□ 0.2
UPK3A-201ENST00000216211 CACNA1IQ9P0X4 2223 aa16.32■□□□□ 0.2
UPK3A-201ENST00000216211 UBQLN1Q9UMX0 589 aaKnown RBP16.32■□□□□ 0.2
UPK3A-201ENST00000216211 TIMM13Q9Y5L4 95 aaPredicted RBP16.32■□□□□ 0.2
UPK3A-201ENST00000216211 COL4A2P08572 1712 aa16.31■□□□□ 0.2
UPK3A-201ENST00000216211 VPS37CA5D8V6 355 aaPredicted RBP16.31■□□□□ 0.2
UPK3A-201ENST00000216211 M0QZQ0 153 aa16.31■□□□□ 0.2
UPK3A-201ENST00000216211 NRG2O14511 850 aaPredicted RBP16.31■□□□□ 0.2
UPK3A-201ENST00000216211 OGTO15294 1046 aa16.31■□□□□ 0.2
UPK3A-201ENST00000216211 TRAK2O60296 914 aa16.31■□□□□ 0.2
UPK3A-201ENST00000216211 FAM189A1O60320 539 aa16.31■□□□□ 0.2
UPK3A-201ENST00000216211 ECI2O75521 394 aa16.31■□□□□ 0.2
UPK3A-201ENST00000216211 BMP15O95972 392 aa16.31■□□□□ 0.2
UPK3A-201ENST00000216211 PIGRP01833 764 aa16.31■□□□□ 0.2
UPK3A-201ENST00000216211 NMT1P30419 496 aaKnown RBP16.31■□□□□ 0.2
UPK3A-201ENST00000216211 CCR2P41597 374 aa16.31■□□□□ 0.2
UPK3A-201ENST00000216211 ZNF131P52739 623 aa16.31■□□□□ 0.2
UPK3A-201ENST00000216211 TWF1Q12792 350 aa16.31■□□□□ 0.2
UPK3A-201ENST00000216211 ZBTB6Q15916 424 aa16.31■□□□□ 0.2
UPK3A-201ENST00000216211 ENOX2Q16206 610 aaKnown RBP16.31■□□□□ 0.2
UPK3A-201ENST00000216211 TANGO2Q6ICL3 276 aa16.31■□□□□ 0.2
UPK3A-201ENST00000216211 PDZD4Q76G19 769 aaPredicted RBP16.31■□□□□ 0.2
UPK3A-201ENST00000216211 HS6ST3Q8IZP7 471 aa16.31■□□□□ 0.2
UPK3A-201ENST00000216211 ELMOD1Q8N336 334 aa16.31■□□□□ 0.2
UPK3A-201ENST00000216211 FAM212AQ96EL1 285 aa16.31■□□□□ 0.2
UPK3A-201ENST00000216211 FIZ1Q96SL8 496 aa16.31■□□□□ 0.2
UPK3A-201ENST00000216211 RPF1Q9H9Y2 349 aaKnown RBP16.31■□□□□ 0.2
UPK3A-201ENST00000216211 AFF4Q9UHB7 1163 aaKnown RBP16.31■□□□□ 0.2
UPK3A-201ENST00000216211 MTF2Q9Y483 593 aaPredicted RBP16.31■□□□□ 0.2
UPK3A-201ENST00000216211 FAM186AA6NE01 2351 aa16.3■□□□□ 0.2
UPK3A-201ENST00000216211 KANSL1LA0AUZ9 987 aa16.3■□□□□ 0.2
UPK3A-201ENST00000216211 PPEF2O14830 753 aa16.3■□□□□ 0.2
UPK3A-201ENST00000216211 XPOTO43592 962 aaKnown RBP16.3■□□□□ 0.2
UPK3A-201ENST00000216211 TBCAO75347 108 aaKnown RBP16.3■□□□□ 0.2
UPK3A-201ENST00000216211 OR4Q2P0C623 313 aa16.3■□□□□ 0.2
UPK3A-201ENST00000216211 CYP3A5P20815 502 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms