RNA–Protein interactions for RNA: ENST00000215829.7

SNRPD3-201, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD3, Length 1,763 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-201ENST00000215829 LPPQ93052 612 aa17.14■□□□□ 0.33
SNRPD3-201ENST00000215829 C18orf25Q96B23 403 aaPredicted RBP17.14■□□□□ 0.33
SNRPD3-201ENST00000215829 CCDC42Q96M95 316 aa17.14■□□□□ 0.33
SNRPD3-201ENST00000215829 TMEM39AQ9NV64 488 aa17.14■□□□□ 0.33
SNRPD3-201ENST00000215829 AGAP1Q9UPQ3 857 aa17.14■□□□□ 0.33
SNRPD3-201ENST00000215829 R3HCC1Q9Y3T6 440 aaKnown RBP17.14■□□□□ 0.33
SNRPD3-201ENST00000215829 SSU72P8A0A1W2PR75 194 aa17.13■□□□□ 0.33
SNRPD3-201ENST00000215829 C9IYK1 514 aa17.13■□□□□ 0.33
SNRPD3-201ENST00000215829 PTGESO14684 152 aa17.13■□□□□ 0.33
SNRPD3-201ENST00000215829 EVI5O60447 810 aa17.13■□□□□ 0.33
SNRPD3-201ENST00000215829 CLTBP09497 229 aa17.13■□□□□ 0.33
SNRPD3-201ENST00000215829 ATF7P17544 494 aaPredicted RBP17.13■□□□□ 0.33
SNRPD3-201ENST00000215829 CYP3A5P20815 502 aa17.13■□□□□ 0.33
SNRPD3-201ENST00000215829 POLR2BP30876 1174 aaKnown RBP17.13■□□□□ 0.33
SNRPD3-201ENST00000215829 FAM189BP81408 668 aa17.13■□□□□ 0.33
SNRPD3-201ENST00000215829 ZNF598Q86UK7 904 aaKnown RBP17.13■□□□□ 0.33
SNRPD3-201ENST00000215829 FAM71AQ8IYT1 594 aa17.13■□□□□ 0.33
SNRPD3-201ENST00000215829 TMEM130Q8N3G9 435 aa17.13■□□□□ 0.33
SNRPD3-201ENST00000215829 GSTCDQ8NEC7 633 aa17.13■□□□□ 0.33
SNRPD3-201ENST00000215829 DBF4BQ8NFT6 615 aa17.13■□□□□ 0.33
SNRPD3-201ENST00000215829 SEPT8Q92599 483 aa17.13■□□□□ 0.33
SNRPD3-201ENST00000215829 APBB2Q92870 758 aa17.13■□□□□ 0.33
SNRPD3-201ENST00000215829 FAXDC2Q96IV6 333 aa17.13■□□□□ 0.33
SNRPD3-201ENST00000215829 PPP1R12CQ9BZL4 782 aa17.13■□□□□ 0.33
SNRPD3-201ENST00000215829 WNT8AQ9H1J5 351 aa17.13■□□□□ 0.33
SNRPD3-201ENST00000215829 TSPYL2Q9H2G4 693 aaPredicted RBP17.13■□□□□ 0.33
SNRPD3-201ENST00000215829 VRTNQ9H8Y1 702 aa17.13■□□□□ 0.33
SNRPD3-201ENST00000215829 UBN1Q9NPG3 1134 aa17.13■□□□□ 0.33
SNRPD3-201ENST00000215829 RNF19AQ9NV58 838 aa17.13■□□□□ 0.33
SNRPD3-201ENST00000215829 TUBGCP4Q9UGJ1 667 aa17.13■□□□□ 0.33
SNRPD3-201ENST00000215829 EPN1Q9Y6I3 576 aaPredicted RBP17.13■□□□□ 0.33
SNRPD3-201ENST00000215829 CLSTN1O94985 981 aa17.12■□□□□ 0.33
SNRPD3-201ENST00000215829 STAU1O95793 577 aaKnown RBP17.12■□□□□ 0.33
SNRPD3-201ENST00000215829 CXCL10P02778 98 aa17.12■□□□□ 0.33
SNRPD3-201ENST00000215829 CYP2C18P33260 490 aa17.12■□□□□ 0.33
SNRPD3-201ENST00000215829 CYLC1P35663 651 aaPredicted RBP17.12■□□□□ 0.33
SNRPD3-201ENST00000215829 EIF4A3P38919 411 aaKnown RBP17.12■□□□□ 0.33
SNRPD3-201ENST00000215829 MLH1P40692 756 aa17.12■□□□□ 0.33
SNRPD3-201ENST00000215829 CCL23P55773 120 aa17.12■□□□□ 0.33
SNRPD3-201ENST00000215829 TDRD12Q587J7 1177 aaKnown RBP17.12■□□□□ 0.33
SNRPD3-201ENST00000215829 TOGARAM2Q6ZUX3 1019 aa17.12■□□□□ 0.33
SNRPD3-201ENST00000215829 LINC01599Q8WXQ3 324 aa17.12■□□□□ 0.33
SNRPD3-201ENST00000215829 SCLYQ96I15 445 aa17.12■□□□□ 0.33
SNRPD3-201ENST00000215829 ZFP42Q96MM3 310 aa17.12■□□□□ 0.33
SNRPD3-201ENST00000215829 PPP1R10Q96QC0 940 aaKnown RBP17.12■□□□□ 0.33
SNRPD3-201ENST00000215829 GAD1Q99259 594 aa17.12■□□□□ 0.33
SNRPD3-201ENST00000215829 ARID3AQ99856 593 aa17.12■□□□□ 0.33
SNRPD3-201ENST00000215829 NIF3L1Q9GZT8 377 aa17.12■□□□□ 0.33
SNRPD3-201ENST00000215829 HAUS4Q9H6D7 363 aa17.12■□□□□ 0.33
SNRPD3-201ENST00000215829 KCND1Q9NSA2 647 aa17.12■□□□□ 0.33
SNRPD3-201ENST00000215829 TANC1Q9C0D5 1861 aa17.12■□□□□ 0.33
SNRPD3-201ENST00000215829 ARL5CA6NH57 179 aa17.12■□□□□ 0.33
SNRPD3-201ENST00000215829 NDUFA10O95299 355 aa17.12■□□□□ 0.33
SNRPD3-201ENST00000215829 EOMESO95936 686 aa17.12■□□□□ 0.33
SNRPD3-201ENST00000215829 ASTE1Q2TB18 679 aaPredicted RBP17.12■□□□□ 0.33
SNRPD3-201ENST00000215829 C17orf53Q8N3J3 647 aaPredicted RBP17.12■□□□□ 0.33
SNRPD3-201ENST00000215829 RNF169Q8NCN4 708 aa17.12■□□□□ 0.33
SNRPD3-201ENST00000215829 HPDLQ96IR7 371 aa17.12■□□□□ 0.33
SNRPD3-201ENST00000215829 RPS6KC1Q96S38 1066 aa17.12■□□□□ 0.33
SNRPD3-201ENST00000215829 RSAD1Q9HA92 442 aa17.12■□□□□ 0.33
SNRPD3-201ENST00000215829 USP8P40818 1118 aa17.11■□□□□ 0.33
SNRPD3-201ENST00000215829 PTK2Q05397 1052 aa17.11■□□□□ 0.33
SNRPD3-201ENST00000215829 WDR72Q3MJ13 1102 aa17.11■□□□□ 0.33
SNRPD3-201ENST00000215829 ZNF667Q5HYK9 610 aa17.11■□□□□ 0.33
SNRPD3-201ENST00000215829 C9orf57Q5W0N0 161 aa17.11■□□□□ 0.33
SNRPD3-201ENST00000215829 SMYD5Q6GMV2 418 aa17.11■□□□□ 0.33
SNRPD3-201ENST00000215829 DEF6Q9H4E7 631 aa17.11■□□□□ 0.33
SNRPD3-201ENST00000215829 SLC38A7Q9NVC3 462 aa17.11■□□□□ 0.33
SNRPD3-201ENST00000215829 MIOSQ9NXC5 875 aa17.11■□□□□ 0.33
SNRPD3-201ENST00000215829 ADGRG1Q9Y653 693 aa17.11■□□□□ 0.33
SNRPD3-201ENST00000215829 ANO9A1A5B4 782 aa17.1■□□□□ 0.33
SNRPD3-201ENST00000215829 EIF3CLB5ME19 914 aaKnown RBP17.1■□□□□ 0.33
SNRPD3-201ENST00000215829 PIRO00625 290 aa17.1■□□□□ 0.33
SNRPD3-201ENST00000215829 ENPP3O14638 875 aa17.1■□□□□ 0.33
SNRPD3-201ENST00000215829 THP07101 528 aa17.1■□□□□ 0.33
SNRPD3-201ENST00000215829 EN2P19622 333 aaPredicted RBP17.1■□□□□ 0.33
SNRPD3-201ENST00000215829 ACO1P21399 889 aaKnown RBP17.1■□□□□ 0.33
SNRPD3-201ENST00000215829 AFF1P51825 1210 aaKnown RBP17.1■□□□□ 0.33
SNRPD3-201ENST00000215829 SOX4Q06945 474 aaPredicted RBP17.1■□□□□ 0.33
SNRPD3-201ENST00000215829 MYO1EQ12965 1108 aa17.1■□□□□ 0.33
SNRPD3-201ENST00000215829 ZNF571Q7Z3V5 609 aaPredicted RBP17.1■□□□□ 0.33
SNRPD3-201ENST00000215829 CCAR2Q8N163 923 aaKnown RBP17.1■□□□□ 0.33
SNRPD3-201ENST00000215829 LRRC52Q8N7C0 313 aa17.1■□□□□ 0.33
SNRPD3-201ENST00000215829 EIF3CQ99613 913 aaKnown RBP17.1■□□□□ 0.33
SNRPD3-201ENST00000215829 DESI2Q9BSY9 194 aa17.1■□□□□ 0.33
SNRPD3-201ENST00000215829 NXF1Q9UBU9 619 aaKnown RBP17.1■□□□□ 0.33
SNRPD3-201ENST00000215829 CNTN6Q9UQ52 1028 aa17.1■□□□□ 0.33
SNRPD3-201ENST00000215829 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.1■□□□□ 0.33
SNRPD3-201ENST00000215829 SCN5AQ14524 2016 aa17.1■□□□□ 0.33
SNRPD3-201ENST00000215829 CYP26A1O43174 497 aa17.1■□□□□ 0.33
SNRPD3-201ENST00000215829 AKR1B10O60218 316 aa17.1■□□□□ 0.33
SNRPD3-201ENST00000215829 ANXA13P27216 316 aa17.1■□□□□ 0.33
SNRPD3-201ENST00000215829 LRPAP1P30533 357 aa17.1■□□□□ 0.33
SNRPD3-201ENST00000215829 CLCN1P35523 988 aa17.1■□□□□ 0.33
SNRPD3-201ENST00000215829 ASPAP45381 313 aa17.1■□□□□ 0.33
SNRPD3-201ENST00000215829 KIF11P52732 1056 aa17.1■□□□□ 0.33
SNRPD3-201ENST00000215829 UBE2Q1Q7Z7E8 422 aa17.1■□□□□ 0.33
SNRPD3-201ENST00000215829 PPP2R2CQ9Y2T4 447 aa17.1■□□□□ 0.33
SNRPD3-201ENST00000215829 TET1Q8NFU7 2136 aa17.09■□□□□ 0.33
SNRPD3-201ENST00000215829 PPEF2O14830 753 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms