RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 NIF3L1Q9GZT8 377 aa8.81□□□□□ -1
VAMP3-201ENST00000054666 ERAP1Q9NZ08 941 aa8.81□□□□□ -1
VAMP3-201ENST00000054666 ADAM22Q9P0K1 906 aa8.81□□□□□ -1
VAMP3-201ENST00000054666 MTRF1LQ9UGC7 380 aaKnown RBP8.81□□□□□ -1
VAMP3-201ENST00000054666 PCYOX1Q9UHG3 505 aa8.81□□□□□ -1
VAMP3-201ENST00000054666 NR2E1Q9Y466 385 aa8.81□□□□□ -1
VAMP3-201ENST00000054666 CEP83Q9Y592 693 aa8.81□□□□□ -1
VAMP3-201ENST00000054666 NUB1Q9Y5A7 615 aa8.81□□□□□ -1
VAMP3-201ENST00000054666 PASKQ96RG2 1323 aa8.81□□□□□ -1
VAMP3-201ENST00000054666 ACKR2O00590 384 aa8.81□□□□□ -1
VAMP3-201ENST00000054666 ASAP2O43150 1006 aa8.81□□□□□ -1
VAMP3-201ENST00000054666 ASS1P00966 412 aaKnown RBP8.81□□□□□ -1
VAMP3-201ENST00000054666 PYGMP11217 842 aa8.81□□□□□ -1
VAMP3-201ENST00000054666 MAN1A1P33908 653 aa8.81□□□□□ -1
VAMP3-201ENST00000054666 YWHAEP62258 255 aaKnown RBP8.81□□□□□ -1
VAMP3-201ENST00000054666 TFAMQ00059 246 aaKnown RBP8.81□□□□□ -1
VAMP3-201ENST00000054666 MOGSQ13724 837 aa8.81□□□□□ -1
VAMP3-201ENST00000054666 ZNF699Q32M78 642 aa8.81□□□□□ -1
VAMP3-201ENST00000054666 SPDYCQ5MJ68 293 aa8.81□□□□□ -1
VAMP3-201ENST00000054666 DUPD1Q68J44 220 aa8.81□□□□□ -1
VAMP3-201ENST00000054666 GPAT2Q6NUI2 795 aa8.81□□□□□ -1
VAMP3-201ENST00000054666 CCDC62Q6P9F0 684 aa8.81□□□□□ -1
VAMP3-201ENST00000054666 RUFY4Q6ZNE9 571 aa8.81□□□□□ -1
VAMP3-201ENST00000054666 ARMCX2Q7L311 632 aa8.81□□□□□ -1
VAMP3-201ENST00000054666 TMC3Q7Z5M5 1100 aa8.81□□□□□ -1
VAMP3-201ENST00000054666 PRELID2Q8N945 189 aa8.81□□□□□ -1
VAMP3-201ENST00000054666 ARL8AQ96BM9 186 aa8.81□□□□□ -1
VAMP3-201ENST00000054666 CYFIP2Q96F07 1278 aa8.81□□□□□ -1
VAMP3-201ENST00000054666 CAPS2Q9BXY5 557 aa8.81□□□□□ -1
VAMP3-201ENST00000054666 NEUROG2Q9H2A3 272 aa8.81□□□□□ -1
VAMP3-201ENST00000054666 R3HDMLQ9H3Y0 253 aa8.81□□□□□ -1
VAMP3-201ENST00000054666 CNTN6Q9UQ52 1028 aa8.81□□□□□ -1
VAMP3-201ENST00000054666 MROH7Q68CQ1 1323 aa8.81□□□□□ -1
VAMP3-201ENST00000054666 ZBTB42B2RXF5 422 aa8.8□□□□□ -1
VAMP3-201ENST00000054666 PSTPIP1O43586 416 aa8.8□□□□□ -1
VAMP3-201ENST00000054666 FAM189A1O60320 539 aa8.8□□□□□ -1
VAMP3-201ENST00000054666 SHOX2O60902 331 aaPredicted RBP8.8□□□□□ -1
VAMP3-201ENST00000054666 RPS6KA5O75582 802 aa8.8□□□□□ -1
VAMP3-201ENST00000054666 PROSCO94903 275 aa8.8□□□□□ -1
VAMP3-201ENST00000054666 ECEL1O95672 775 aa8.8□□□□□ -1
VAMP3-201ENST00000054666 PHKA2P46019 1235 aa8.8□□□□□ -1
VAMP3-201ENST00000054666 CLCN3P51790 818 aa8.8□□□□□ -1
VAMP3-201ENST00000054666 DRG2P55039 364 aaKnown RBP8.8□□□□□ -1
VAMP3-201ENST00000054666 C1QBPQ07021 282 aaKnown RBP8.8□□□□□ -1
VAMP3-201ENST00000054666 DHX9Q08211 1270 aaKnown RBP8.8□□□□□ -1
VAMP3-201ENST00000054666 MKRN4PQ13434 485 aaPredicted RBP8.8□□□□□ -1
VAMP3-201ENST00000054666 CYP1B1Q16678 543 aa8.8□□□□□ -1
VAMP3-201ENST00000054666 SGSM1Q2NKQ1 1148 aa8.8□□□□□ -1
VAMP3-201ENST00000054666 SGO2Q562F6 1265 aa8.8□□□□□ -1
VAMP3-201ENST00000054666 DNAJC21Q5F1R6 531 aaKnown RBP8.8□□□□□ -1
VAMP3-201ENST00000054666 KCTD16Q68DU8 428 aa8.8□□□□□ -1
VAMP3-201ENST00000054666 EFCAB12Q6NXP0 572 aa8.8□□□□□ -1
VAMP3-201ENST00000054666 TSHZ1Q6ZSZ6 1077 aa8.8□□□□□ -1
VAMP3-201ENST00000054666 PHF13Q86YI8 300 aaPredicted RBP8.8□□□□□ -1
VAMP3-201ENST00000054666 CCDC50Q8IVM0 306 aa8.8□□□□□ -1
VAMP3-201ENST00000054666 C12orf50Q8NA57 414 aaPredicted RBP8.8□□□□□ -1
VAMP3-201ENST00000054666 C1orf131Q8NDD1 294 aaKnown RBP8.8□□□□□ -1
VAMP3-201ENST00000054666 TRAPPC12Q8WVT3 735 aa8.8□□□□□ -1
VAMP3-201ENST00000054666 PIK3R5Q8WYR1 880 aa8.8□□□□□ -1
VAMP3-201ENST00000054666 COPS5Q92905 334 aa8.8□□□□□ -1
VAMP3-201ENST00000054666 SLC10A4Q96EP9 437 aa8.8□□□□□ -1
VAMP3-201ENST00000054666 ATP6V1G3Q96LB4 118 aa8.8□□□□□ -1
VAMP3-201ENST00000054666 FAM129AQ9BZQ8 928 aa8.8□□□□□ -1
VAMP3-201ENST00000054666 CENPHQ9H3R5 247 aa8.8□□□□□ -1
VAMP3-201ENST00000054666 EFCC1Q9HA90 598 aa8.8□□□□□ -1
VAMP3-201ENST00000054666 PRMT7Q9NVM4 692 aaPredicted RBP8.8□□□□□ -1
VAMP3-201ENST00000054666 LCMT1Q9UIC8 334 aa8.8□□□□□ -1
VAMP3-201ENST00000054666 CPSF3Q9UKF6 684 aaKnown RBP8.8□□□□□ -1
VAMP3-201ENST00000054666 IVNS1ABPQ9Y6Y0 642 aa8.8□□□□□ -1
VAMP3-201ENST00000054666 UMODL1Q5DID0 1318 aa8.8□□□□□ -1
VAMP3-201ENST00000054666 IQCA1LA6NCM1 817 aa8.8□□□□□ -1
VAMP3-201ENST00000054666 TTLL13PA6NNM8 815 aa8.8□□□□□ -1
VAMP3-201ENST00000054666 IL18RAPO95256 599 aa8.8□□□□□ -1
VAMP3-201ENST00000054666 LSM8O95777 96 aaKnown RBP8.8□□□□□ -1
VAMP3-201ENST00000054666 GH1P01241 217 aa8.8□□□□□ -1
VAMP3-201ENST00000054666 CALB1P05937 261 aa8.8□□□□□ -1
VAMP3-201ENST00000054666 YBX3P16989 372 aaKnown RBP eCLIP8.8□□□□□ -19e-8■■■■□ 20.3
VAMP3-201ENST00000054666 CD58P19256 250 aa8.8□□□□□ -1
VAMP3-201ENST00000054666 NR1D1P20393 614 aa8.8□□□□□ -1
VAMP3-201ENST00000054666 COILP38432 576 aaPredicted RBP8.8□□□□□ -1
VAMP3-201ENST00000054666 CETN2P41208 172 aa8.8□□□□□ -1
VAMP3-201ENST00000054666 PLTPP55058 493 aa8.8□□□□□ -1
VAMP3-201ENST00000054666 HNRNPH2P55795 449 aaKnown RBP8.8□□□□□ -1
VAMP3-201ENST00000054666 IGBP1P78318 339 aa8.8□□□□□ -1
VAMP3-201ENST00000054666 IFFO1Q0D2I5 559 aa8.8□□□□□ -1
VAMP3-201ENST00000054666 LAMC2Q13753 1193 aa8.8□□□□□ -1
VAMP3-201ENST00000054666 PPP1R7Q15435 360 aa8.8□□□□□ -1
VAMP3-201ENST00000054666 ZNF484Q5JVG2 852 aa8.8□□□□□ -1
VAMP3-201ENST00000054666 SMYD5Q6GMV2 418 aa8.8□□□□□ -1
VAMP3-201ENST00000054666 MMS22LQ6ZRQ5 1243 aa8.8□□□□□ -1
VAMP3-201ENST00000054666 THNSL1Q8IYQ7 743 aa8.8□□□□□ -1
VAMP3-201ENST00000054666 ARFGAP2Q8N6H7 521 aa8.8□□□□□ -1
VAMP3-201ENST00000054666 GPRC5AQ8NFJ5 357 aa8.8□□□□□ -1
VAMP3-201ENST00000054666 GRK7Q8WTQ7 553 aa8.8□□□□□ -1
VAMP3-201ENST00000054666 SYT17Q9BSW7 474 aa8.8□□□□□ -1
VAMP3-201ENST00000054666 RPF1Q9H9Y2 349 aaKnown RBP8.8□□□□□ -1
VAMP3-201ENST00000054666 VTA1Q9NP79 307 aa8.8□□□□□ -1
VAMP3-201ENST00000054666 PARVAQ9NVD7 372 aa8.8□□□□□ -1
VAMP3-201ENST00000054666 SNX24Q9Y343 169 aa8.8□□□□□ -1
VAMP3-201ENST00000054666 PLXNB2O15031 1838 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms