RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 Gm5622Q810Q0 167 aa19.44■□□□□ 0.7
Trim47-202ENSMUST00000106441 Aoc2Q812C9 757 aa19.44■□□□□ 0.7
Trim47-202ENSMUST00000106441 Bclaf1Q8K019 919 aaKnown RBP19.44■□□□□ 0.7
Trim47-202ENSMUST00000106441 Armc9Q9D2I5 817 aa19.44■□□□□ 0.7
Trim47-202ENSMUST00000106441 4930449I24RikQ9D5E3 319 aa19.44■□□□□ 0.7
Trim47-202ENSMUST00000106441 Ftsj3Q9DBE9 838 aaKnown RBP19.44■□□□□ 0.7
Trim47-202ENSMUST00000106441 Pds5aQ6A026 1332 aa19.44■□□□□ 0.7
Trim47-202ENSMUST00000106441 Dennd4aE9Q8V6 1869 aa19.44■□□□□ 0.7
Trim47-202ENSMUST00000106441 DohhA0A1Y7VJ29 135 aa19.44■□□□□ 0.7
Trim47-202ENSMUST00000106441 Vmn2r63E9Q0K5 859 aa19.44■□□□□ 0.7
Trim47-202ENSMUST00000106441 Gm9268E9Q0M3 861 aa19.44■□□□□ 0.7
Trim47-202ENSMUST00000106441 4933406M09RikG3XA12 479 aa19.44■□□□□ 0.7
Trim47-202ENSMUST00000106441 Vmn2r62K7N712 859 aa19.44■□□□□ 0.7
Trim47-202ENSMUST00000106441 Timm44O35857 452 aa19.44■□□□□ 0.7
Trim47-202ENSMUST00000106441 Slc16a2O70324 545 aa19.44■□□□□ 0.7
Trim47-202ENSMUST00000106441 Fscn2Q32M02 492 aa19.44■□□□□ 0.7
Trim47-202ENSMUST00000106441 OgdhQ60597 1023 aaKnown RBP19.44■□□□□ 0.7
Trim47-202ENSMUST00000106441 Nim1kQ8BHI9 436 aa19.44■□□□□ 0.7
Trim47-202ENSMUST00000106441 Tmem120aQ8C1E7 343 aa19.44■□□□□ 0.7
Trim47-202ENSMUST00000106441 Ddx39aQ8VDW0 427 aaKnown RBP19.44■□□□□ 0.7
Trim47-202ENSMUST00000106441 MlxiplQ99MZ3 864 aa19.44■□□□□ 0.7
Trim47-202ENSMUST00000106441 Mphosph6Q9D1Q1 161 aa19.44■□□□□ 0.7
Trim47-202ENSMUST00000106441 Sdr42e1Q9D665 394 aa19.44■□□□□ 0.7
Trim47-202ENSMUST00000106441 Rpap3Q9D706 660 aa19.44■□□□□ 0.7
Trim47-202ENSMUST00000106441 Mnat1P51949 309 aa19.43■□□□□ 0.7
Trim47-202ENSMUST00000106441 GckP52792 465 aa19.43■□□□□ 0.7
Trim47-202ENSMUST00000106441 Bpifb5Q3UQ05 490 aa19.43■□□□□ 0.7
Trim47-202ENSMUST00000106441 GmncQ3URY2 333 aa19.43■□□□□ 0.7
Trim47-202ENSMUST00000106441 Zfp957Q3UT76 567 aa19.43■□□□□ 0.7
Trim47-202ENSMUST00000106441 Phc1Q64028 1012 aa19.43■□□□□ 0.7
Trim47-202ENSMUST00000106441 Kcnt1Q6ZPR4 1224 aa19.43■□□□□ 0.7
Trim47-202ENSMUST00000106441 Cyfip1Q7TMB8 1253 aa19.43■□□□□ 0.7
Trim47-202ENSMUST00000106441 Rassf6Q80UQ2 353 aa19.43■□□□□ 0.7
Trim47-202ENSMUST00000106441 Znf784Q8BI69 297 aa19.43■□□□□ 0.7
Trim47-202ENSMUST00000106441 Kctd6Q8BNL5 237 aa19.43■□□□□ 0.7
Trim47-202ENSMUST00000106441 Kat5Q8CHK4 513 aa19.43■□□□□ 0.7
Trim47-202ENSMUST00000106441 Pcdhb3Q91XZ7 784 aa19.43■□□□□ 0.7
Trim47-202ENSMUST00000106441 Hars2Q99KK9 505 aa19.43■□□□□ 0.7
Trim47-202ENSMUST00000106441 Krt17Q9QWL7 433 aa19.43■□□□□ 0.7
Trim47-202ENSMUST00000106441 Hic1Q9R1Y5 733 aa19.43■□□□□ 0.7
Trim47-202ENSMUST00000106441 Orc1Q9Z1N2 840 aaKnown RBP19.43■□□□□ 0.7
Trim47-202ENSMUST00000106441 Rrp36Q3UFY0 244 aaKnown RBP19.43■□□□□ 0.7
Trim47-202ENSMUST00000106441 MaeaQ4VC33 396 aa19.43■□□□□ 0.7
Trim47-202ENSMUST00000106441 Jade3Q6IE82 823 aa19.43■□□□□ 0.7
Trim47-202ENSMUST00000106441 Ntrk3Q6VNS1 825 aa19.43■□□□□ 0.7
Trim47-202ENSMUST00000106441 Enoph1Q8BGB7 257 aa19.43■□□□□ 0.7
Trim47-202ENSMUST00000106441 Kcnc4Q8R1C0 628 aa19.43■□□□□ 0.7
Trim47-202ENSMUST00000106441 Fam187aQ9D3R5 417 aa19.43■□□□□ 0.7
Trim47-202ENSMUST00000106441 Diaph2O70566 1098 aa19.42■□□□□ 0.7
Trim47-202ENSMUST00000106441 M6prP24668 278 aa19.42■□□□□ 0.7
Trim47-202ENSMUST00000106441 LxnP70202 222 aa19.42■□□□□ 0.7
Trim47-202ENSMUST00000106441 Ly9Q01965 654 aa19.42■□□□□ 0.7
Trim47-202ENSMUST00000106441 Zcchc2Q69ZB8 1166 aa19.42■□□□□ 0.7
Trim47-202ENSMUST00000106441 Stambpl1Q76N33 436 aa19.42■□□□□ 0.7
Trim47-202ENSMUST00000106441 Rhbdf2Q80WQ6 827 aa19.42■□□□□ 0.7
Trim47-202ENSMUST00000106441 Fbxo38Q8BMI0 1194 aa19.42■□□□□ 0.7
Trim47-202ENSMUST00000106441 Pcdhgb4Q91XX6 912 aa19.42■□□□□ 0.7
Trim47-202ENSMUST00000106441 Foxp3Q99JB6 429 aa19.42■□□□□ 0.7
Trim47-202ENSMUST00000106441 Lman1Q9D0F3 517 aa19.42■□□□□ 0.7
Trim47-202ENSMUST00000106441 Spint1Q9R097 507 aa19.42■□□□□ 0.7
Trim47-202ENSMUST00000106441 Nup62clA2AG10 272 aa19.42■□□□□ 0.7
Trim47-202ENSMUST00000106441 Nfx1B1AY10 1114 aaKnown RBP19.42■□□□□ 0.7
Trim47-202ENSMUST00000106441 1700018F24RikB2RW27 314 aa19.42■□□□□ 0.7
Trim47-202ENSMUST00000106441 Itga9B8JK39 1036 aa19.42■□□□□ 0.7
Trim47-202ENSMUST00000106441 NfkbieO54910 364 aa19.42■□□□□ 0.7
Trim47-202ENSMUST00000106441 Etv6P97360 485 aa19.42■□□□□ 0.7
Trim47-202ENSMUST00000106441 Wdr41Q3UDP0 460 aa19.42■□□□□ 0.7
Trim47-202ENSMUST00000106441 Abl2Q4JIM5 1182 aa19.42■□□□□ 0.7
Trim47-202ENSMUST00000106441 Gbp4Q61107 620 aa19.42■□□□□ 0.7
Trim47-202ENSMUST00000106441 Pih1h3bQ8C6P5 218 aa19.42■□□□□ 0.7
Trim47-202ENSMUST00000106441 Ero1aQ8R180 464 aa19.42■□□□□ 0.7
Trim47-202ENSMUST00000106441 Slc26a7Q8R2Z3 656 aa19.42■□□□□ 0.7
Trim47-202ENSMUST00000106441 NptxrQ99J85 493 aa19.42■□□□□ 0.7
Trim47-202ENSMUST00000106441 Trmt10bQ9D075 318 aa19.42■□□□□ 0.7
Trim47-202ENSMUST00000106441 Gpatch1Q9DBM1 930 aa19.42■□□□□ 0.7
Trim47-202ENSMUST00000106441 Ecel1Q9JMI0 775 aa19.42■□□□□ 0.7
Trim47-202ENSMUST00000106441 Rasgrp1Q9Z1S3 795 aa19.42■□□□□ 0.7
Trim47-202ENSMUST00000106441 Srsf11E9Q6E5 511 aaKnown RBP19.41■□□□□ 0.7
Trim47-202ENSMUST00000106441 Olfr67F8VPJ8 320 aa19.41■□□□□ 0.7
Trim47-202ENSMUST00000106441 Taf4bG5E8Z2 855 aa19.41■□□□□ 0.7
Trim47-202ENSMUST00000106441 Mt-CybP00158 381 aa19.41■□□□□ 0.7
Trim47-202ENSMUST00000106441 Cyp2b9P12790 491 aa19.41■□□□□ 0.7
Trim47-202ENSMUST00000106441 Bmp2P21274 394 aa19.41■□□□□ 0.7
Trim47-202ENSMUST00000106441 Mgat1P27808 447 aa19.41■□□□□ 0.7
Trim47-202ENSMUST00000106441 Hoxd10P28359 340 aa19.41■□□□□ 0.7
Trim47-202ENSMUST00000106441 Ccnd2P30280 289 aa19.41■□□□□ 0.7
Trim47-202ENSMUST00000106441 Foxp2P58463 714 aa19.41■□□□□ 0.7
Trim47-202ENSMUST00000106441 Soat1Q61263 540 aa19.41■□□□□ 0.7
Trim47-202ENSMUST00000106441 Sun2Q8BJS4 731 aa19.41■□□□□ 0.7
Trim47-202ENSMUST00000106441 AgpsQ8C0I1 645 aa19.41■□□□□ 0.7
Trim47-202ENSMUST00000106441 Dis3Q9CSH3 958 aaKnown RBP19.41■□□□□ 0.7
Trim47-202ENSMUST00000106441 Olr1Q9EQ09 363 aa19.41■□□□□ 0.7
Trim47-202ENSMUST00000106441 Heatr4E9Q357 955 aa19.4■□□□□ 0.7
Trim47-202ENSMUST00000106441 Gm3138K7N754 218 aa19.4■□□□□ 0.7
Trim47-202ENSMUST00000106441 Prl6a1O35257 230 aa19.4■□□□□ 0.7
Trim47-202ENSMUST00000106441 Lpar1P61793 364 aa19.4■□□□□ 0.7
Trim47-202ENSMUST00000106441 Igsf9Q05BQ1 1179 aa19.4■□□□□ 0.7
Trim47-202ENSMUST00000106441 E2f8Q58FA4 860 aa19.4■□□□□ 0.7
Trim47-202ENSMUST00000106441 Tcf12Q61286 706 aa19.4■□□□□ 0.7
Trim47-202ENSMUST00000106441 Ugt1a9Q62452 528 aa19.4■□□□□ 0.7
Retrieved 100 of 22,080 RNA–protein pairs in 27.5 ms