RNA–Protein interactions for RNA: ENSMUST00000041639.6

Syne1-201, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 6,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-201ENSMUST00000041639 Gm10639E9Q6L7 222 aa10.31□□□□□ -0.76
Syne1-201ENSMUST00000041639 Gsta2P10648 222 aa10.31□□□□□ -0.76
Syne1-201ENSMUST00000041639 Casp4P70343 373 aa10.31□□□□□ -0.76
Syne1-201ENSMUST00000041639 Rbm20Q3UQS8 1199 aaKnown RBP10.31□□□□□ -0.76
Syne1-201ENSMUST00000041639 Fbxo39Q5NBU5 443 aa10.31□□□□□ -0.76
Syne1-201ENSMUST00000041639 Tmem59lQ7TNI2 337 aa10.31□□□□□ -0.76
Syne1-201ENSMUST00000041639 Znf598Q80YR4 908 aaKnown RBP10.31□□□□□ -0.76
Syne1-201ENSMUST00000041639 Gcfc2Q8BKT3 769 aa10.31□□□□□ -0.76
Syne1-201ENSMUST00000041639 Slc38a7Q8BWH0 463 aa10.31□□□□□ -0.76
Syne1-201ENSMUST00000041639 Zhx2Q8C0C0 836 aaKnown RBP10.31□□□□□ -0.76
Syne1-201ENSMUST00000041639 Ifi205aQ8CGE8 404 aa10.31□□□□□ -0.76
Syne1-201ENSMUST00000041639 HpdlQ8K248 371 aa10.31□□□□□ -0.76
Syne1-201ENSMUST00000041639 Slc8a2Q8K596 921 aa10.31□□□□□ -0.76
Syne1-201ENSMUST00000041639 PrameQ9D4Z5 464 aa10.31□□□□□ -0.76
Syne1-201ENSMUST00000041639 Abhd2Q9QXM0 425 aa10.31□□□□□ -0.76
Syne1-201ENSMUST00000041639 Nek3Q9R0A5 511 aa10.31□□□□□ -0.76
Syne1-201ENSMUST00000041639 Gm3173A6NAS3 172 aa10.31□□□□□ -0.76
Syne1-201ENSMUST00000041639 Gm3020E9Q3J7 150 aa10.31□□□□□ -0.76
Syne1-201ENSMUST00000041639 Gm5134E9QAB5 671 aa10.31□□□□□ -0.76
Syne1-201ENSMUST00000041639 Gm2897K7N6T7 172 aa10.31□□□□□ -0.76
Syne1-201ENSMUST00000041639 Klc2O88448 599 aa10.31□□□□□ -0.76
Syne1-201ENSMUST00000041639 Tbc1d12Q6A039 696 aa10.31□□□□□ -0.76
Syne1-201ENSMUST00000041639 Gm3411Q8C7R2 150 aa10.31□□□□□ -0.76
Syne1-201ENSMUST00000041639 DpydQ8CHR6 1025 aa10.31□□□□□ -0.76
Syne1-201ENSMUST00000041639 Ddx18Q8K363 660 aaKnown RBP10.31□□□□□ -0.76
Syne1-201ENSMUST00000041639 Ccdc137Q8R0K4 290 aaKnown RBP10.31□□□□□ -0.76
Syne1-201ENSMUST00000041639 Etnk1Q9D4V0 363 aa10.31□□□□□ -0.76
Syne1-201ENSMUST00000041639 Tk2Q9R088 270 aa10.31□□□□□ -0.76
Syne1-201ENSMUST00000041639 AF366264G3X9P9 502 aa10.31□□□□□ -0.76
Syne1-201ENSMUST00000041639 Hnrnph1O35737 449 aaKnown RBP10.31□□□□□ -0.76
Syne1-201ENSMUST00000041639 Capn13Q3UW68 665 aa10.31□□□□□ -0.76
Syne1-201ENSMUST00000041639 Spdye4aQ5IBH6 268 aa10.31□□□□□ -0.76
Syne1-201ENSMUST00000041639 Slc9c1Q6UJY2 1175 aa10.31□□□□□ -0.76
Syne1-201ENSMUST00000041639 Q8BGN9 141 aa10.31□□□□□ -0.76
Syne1-201ENSMUST00000041639 Aldh1b1Q9CZS1 519 aa10.31□□□□□ -0.76
Syne1-201ENSMUST00000041639 Ddx56Q9D0R4 546 aaKnown RBP10.31□□□□□ -0.76
Syne1-201ENSMUST00000041639 MrgbpQ9DAT2 204 aa10.31□□□□□ -0.76
Syne1-201ENSMUST00000041639 Usp29Q9ES63 869 aa10.31□□□□□ -0.76
Syne1-201ENSMUST00000041639 Capn10Q9ESK3 666 aa10.31□□□□□ -0.76
Syne1-201ENSMUST00000041639 Scgb2b20Q9JI02 112 aa10.31□□□□□ -0.76
Syne1-201ENSMUST00000041639 Trpv2Q9WTR1 756 aa10.31□□□□□ -0.76
Syne1-201ENSMUST00000041639 Wdr49A0A0N4SUK7 710 aa10.31□□□□□ -0.76
Syne1-201ENSMUST00000041639 Zfp984A2A7A2 547 aa10.31□□□□□ -0.76
Syne1-201ENSMUST00000041639 Klc1O88447 541 aa10.31□□□□□ -0.76
Syne1-201ENSMUST00000041639 ChrngP04760 519 aa10.31□□□□□ -0.76
Syne1-201ENSMUST00000041639 Trim43bP86448 445 aa10.31□□□□□ -0.76
Syne1-201ENSMUST00000041639 Arhgef9Q3UTH8 516 aa10.31□□□□□ -0.76
Syne1-201ENSMUST00000041639 Myo19Q5SV80 963 aa10.31□□□□□ -0.76
Syne1-201ENSMUST00000041639 Stip1Q60864 543 aaKnown RBP10.31□□□□□ -0.76
Syne1-201ENSMUST00000041639 Tfdp2Q64163 446 aa10.31□□□□□ -0.76
Syne1-201ENSMUST00000041639 Lrrn2Q6PHP6 730 aa10.31□□□□□ -0.76
Syne1-201ENSMUST00000041639 Ssxb5Q6XAS2 159 aa10.31□□□□□ -0.76
Syne1-201ENSMUST00000041639 Q8BGD0 127 aa10.31□□□□□ -0.76
Syne1-201ENSMUST00000041639 Scfd2Q8BTY8 684 aa10.31□□□□□ -0.76
Syne1-201ENSMUST00000041639 C8aQ8K182 587 aa10.31□□□□□ -0.76
Syne1-201ENSMUST00000041639 Tnip2Q99JG7 430 aa10.31□□□□□ -0.76
Syne1-201ENSMUST00000041639 Coro7Q9D2V7 922 aa10.31□□□□□ -0.76
Syne1-201ENSMUST00000041639 Aff4Q9ESC8 1160 aa10.31□□□□□ -0.76
Syne1-201ENSMUST00000041639 Iqca1lA6H690 825 aa10.3□□□□□ -0.76
Syne1-201ENSMUST00000041639 Etnk2A7MCT6 385 aa10.3□□□□□ -0.76
Syne1-201ENSMUST00000041639 Lonrf1D3YY23 762 aa10.3□□□□□ -0.76
Syne1-201ENSMUST00000041639 Gnrh1P13562 90 aa10.3□□□□□ -0.76
Syne1-201ENSMUST00000041639 RalaP63321 206 aa10.3□□□□□ -0.76
Syne1-201ENSMUST00000041639 Atp4aQ64436 1033 aa10.3□□□□□ -0.76
Syne1-201ENSMUST00000041639 Pdzph1Q8BGR1 1238 aa10.3□□□□□ -0.76
Syne1-201ENSMUST00000041639 Frmd4aQ8BIE6 1020 aa10.3□□□□□ -0.76
Syne1-201ENSMUST00000041639 Wdr35Q8BND3 1181 aa10.3□□□□□ -0.76
Syne1-201ENSMUST00000041639 Stap2Q8R0L1 411 aa10.3□□□□□ -0.76
Syne1-201ENSMUST00000041639 Mrpl2Q9D773 306 aaKnown RBP10.3□□□□□ -0.76
Syne1-201ENSMUST00000041639 Usp31E9Q6Y8 1344 aa10.3□□□□□ -0.76
Syne1-201ENSMUST00000041639 PtproE9Q612 1226 aa10.3□□□□□ -0.76
Syne1-201ENSMUST00000041639 Xirp1O70373 1129 aa10.3□□□□□ -0.76
Syne1-201ENSMUST00000041639 Fcer2P20693 331 aa10.3□□□□□ -0.76
Syne1-201ENSMUST00000041639 C2P21180 760 aa10.3□□□□□ -0.76
Syne1-201ENSMUST00000041639 Mxi1P50540 228 aa10.3□□□□□ -0.76
Syne1-201ENSMUST00000041639 Elmo2Q8BHL5 732 aa10.3□□□□□ -0.76
Syne1-201ENSMUST00000041639 Ccdc151Q8BSN3 593 aa10.3□□□□□ -0.76
Syne1-201ENSMUST00000041639 Amz1Q8BVF9 502 aa10.3□□□□□ -0.76
Syne1-201ENSMUST00000041639 Setd1aE9PYH6 1716 aa10.3□□□□□ -0.76
Syne1-201ENSMUST00000041639 Flt1P35969 1333 aa10.3□□□□□ -0.76
Syne1-201ENSMUST00000041639 Sat1P48026 171 aa10.3□□□□□ -0.76
Syne1-201ENSMUST00000041639 Msx3P70354 204 aa10.3□□□□□ -0.76
Syne1-201ENSMUST00000041639 Ppp1r1bQ60829 194 aa10.3□□□□□ -0.76
Syne1-201ENSMUST00000041639 SnrpaQ62189 287 aaKnown RBP10.3□□□□□ -0.76
Syne1-201ENSMUST00000041639 Fastkd1Q6DI86 829 aa10.3□□□□□ -0.76
Syne1-201ENSMUST00000041639 HlfQ8BW74 295 aa10.3□□□□□ -0.76
Syne1-201ENSMUST00000041639 Washc5Q8C2E7 1159 aaKnown RBP10.3□□□□□ -0.76
Syne1-201ENSMUST00000041639 Cwf19l1Q8CI33 537 aa10.3□□□□□ -0.76
Syne1-201ENSMUST00000041639 Sec22bO08547 215 aaKnown RBP10.3□□□□□ -0.76
Syne1-201ENSMUST00000041639 PkmP52480 531 aaKnown RBP10.3□□□□□ -0.76
Syne1-201ENSMUST00000041639 Tmem35bQ3U0Y2 150 aa10.3□□□□□ -0.76
Syne1-201ENSMUST00000041639 Myo1dQ5SYD0 1006 aa10.3□□□□□ -0.76
Syne1-201ENSMUST00000041639 Edrf1Q6GQV7 1239 aa10.3□□□□□ -0.76
Syne1-201ENSMUST00000041639 Nemp2Q8CB65 421 aa10.3□□□□□ -0.76
Syne1-201ENSMUST00000041639 Art3Q8R2G4 371 aa10.3□□□□□ -0.76
Syne1-201ENSMUST00000041639 Slc5a5Q99PN0 618 aa10.3□□□□□ -0.76
Syne1-201ENSMUST00000041639 CpdO89001 1377 aa10.3□□□□□ -0.76
Syne1-201ENSMUST00000041639 Prss40A6H6T1 365 aa10.3□□□□□ -0.76
Syne1-201ENSMUST00000041639 Tmem132bF7BAB2 1078 aa10.3□□□□□ -0.76
Syne1-201ENSMUST00000041639 PorP37040 678 aa10.3□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 42.4 ms