RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Sgms1Q8VCQ6 419 aa10.45□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Dach2Q925Q8 634 aa10.45□□□□□ -0.74
Ldlr-201ENSMUST00000034713 NptxrQ99J85 493 aa10.45□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Nudt12Q9DCN1 462 aa10.45□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Smok2bQ9QYZ3 484 aa10.45□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Smok2aQ9QYZ6 504 aa10.45□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Pnpla6Q3TRM4 1355 aa10.45□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Ccdc194A0A140LIT1 234 aa10.45□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Erich2E9Q1A6 463 aa10.45□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Zfp266E9Q2S7 604 aa10.45□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Uhmk1P97343 419 aa10.45□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Fra10ac1Q8BP78 315 aa10.45□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Klhl2Q8JZP3 593 aa10.45□□□□□ -0.74
Ldlr-201ENSMUST00000034713 UvragQ8K245 698 aa10.45□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Trim66Q924W6 1242 aa10.45□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Trim16Q99PP9 556 aa10.45□□□□□ -0.74
Ldlr-201ENSMUST00000034713 YwhabQ9CQV8 246 aaKnown RBP10.45□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Git2Q9JLQ2 708 aa10.45□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Siah1aP61092 282 aa10.45□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Ephb1Q8CBF3 984 aa10.45□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Rpap3Q9D706 660 aa10.45□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Ascc1Q9D8Z1 356 aaKnown RBP10.45□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Rasgrp1Q9Z1S3 795 aa10.45□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Rabgap1lA6H6A9 815 aa10.45□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Bnip3O55003 187 aa10.45□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Men1O88559 611 aaKnown RBP10.45□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Senp5Q6NXL6 749 aa10.45□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Klhdc10Q6PAR0 439 aa10.45□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Letm2Q7TNU7 480 aa10.45□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Tmtc4Q8BG19 741 aa10.45□□□□□ -0.74
Ldlr-201ENSMUST00000034713 MtbpQ8BJS8 894 aaKnown RBP10.45□□□□□ -0.74
Ldlr-201ENSMUST00000034713 CntrobQ8CB62 887 aa10.45□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Olfr1494Q8VGP8 315 aa10.45□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Cdc26Q99JP4 85 aa10.45□□□□□ -0.74
Ldlr-201ENSMUST00000034713 JcadQ5DTX6 1320 aa10.44□□□□□ -0.74
Ldlr-201ENSMUST00000034713 PfasQ5SUR0 1337 aa10.44□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Tiam2Q6ZPF3 1715 aa10.44□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Ankfn1A0A140LIW7 1083 aa10.44□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Gm36210A0A1B0GS00 229 aa10.44□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Krt28A6BLY7 462 aa10.44□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Gm15448F6PZL4 682 aa10.44□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Kcna3P16390 528 aa10.44□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Tdpoz2Q717B2 364 aa10.44□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Cyfip1Q7TMB8 1253 aa10.44□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Pgm5Q8BZF8 567 aa10.44□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Dcun1d2Q8BZJ7 259 aa10.44□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Vmn1r218Q8R261 298 aa10.44□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Hip1Q8VD75 1029 aaKnown RBP10.44□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Taf7lQ9D3R9 471 aa10.44□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Kcnh7Q9ER47 1195 aa10.44□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Slc22a3Q9WTW5 551 aa10.44□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Osbpl7A2A716 963 aa10.44□□□□□ -0.74
Ldlr-201ENSMUST00000034713 1700011I03RikE9PYL8 271 aa10.44□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Kcna1P16388 495 aa10.44□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Vcam1P29533 739 aa10.44□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Klrg2Q3UM83 387 aa10.44□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Znf148Q61624 794 aa10.44□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Zfp90Q61967 636 aa10.44□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Tfe3Q64092 572 aaKnown RBP10.44□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Celf4Q7TSY6 486 aa10.44□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Ttc22Q8C159 568 aa10.44□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Nmrk1Q91W63 195 aa10.44□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Polr3fQ921X6 316 aa10.44□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Shcbp1Q9Z179 668 aa10.44□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Abcb11Q9QY30 1321 aa10.44□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Anxa8O35640 327 aa10.44□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Nmt1O70310 496 aaKnown RBP10.44□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Prl2c3P04768 224 aa10.44□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Myl1P05977 188 aa10.44□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Abcb1bP06795 1276 aa10.44□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Zfy1P10925 782 aa10.44□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Nfe2Q07279 373 aa10.44□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Acap2Q6ZQK5 770 aa10.44□□□□□ -0.74
Ldlr-201ENSMUST00000034713 TbataQ7TSD4 393 aa10.44□□□□□ -0.74
Ldlr-201ENSMUST00000034713 A430089I19RikQ8C9W1 407 aa10.44□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Abi1Q8CBW3 481 aa10.44□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Fam160b1Q8CDM8 764 aa10.44□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Mrgprx1Q8CIP3 322 aa10.44□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Mill1Q8HWE7 395 aa10.44□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Trub2Q91WG3 331 aaKnown RBP10.44□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Spag6Q9JLI7 507 aa10.44□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Gm36028A0A0U1RPM1 299 aa10.43□□□□□ -0.74
Ldlr-201ENSMUST00000034713 CidebO70303 219 aa10.43□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Mgat1P27808 447 aa10.43□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Scg3P47867 471 aa10.43□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Npas2P97460 816 aa10.43□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Garnl3Q3V0G7 1038 aa10.43□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Afap1l2Q5DTU0 825 aa10.43□□□□□ -0.74
Ldlr-201ENSMUST00000034713 SnphQ80U23 495 aa10.43□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Ip6k2Q80V72 448 aa10.43□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Nlrp4aQ8BU40 982 aa10.43□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Slc38a7Q8BWH0 463 aa10.43□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Serpina3bQ8BYY9 420 aa10.43□□□□□ -0.74
Ldlr-201ENSMUST00000034713 OplahQ8K010 1288 aa10.43□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Uap1Q91YN5 522 aa10.43□□□□□ -0.74
Ldlr-201ENSMUST00000034713 MymkQ9D1N4 221 aa10.43□□□□□ -0.74
Ldlr-201ENSMUST00000034713 BcamQ9R069 622 aa10.43□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Abcb5B5X0E4 1255 aa10.43□□□□□ -0.74
Ldlr-201ENSMUST00000034713 DtnbO70585 659 aa10.43□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Irf8P23611 424 aa10.43□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 20 ms