RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Usp17leQ7M764 540 aa14.58□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Fbxo44Q8BK26 255 aa14.58□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Ttc39bQ8BYY4 617 aa14.58□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Clptm1Q8VBZ3 664 aa14.58□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Fhod1Q6P9Q4 1197 aa14.58□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Klhl24Q8BRG6 600 aa14.58□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Olfr390Q8VEZ7 311 aa14.58□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Trpc7Q9WVC5 862 aa14.58□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Sucla2Q9Z2I9 463 aa14.58□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Psma2P49722 234 aa14.58□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Pgs1Q8BHF7 553 aa14.58□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Scrn2Q8VCA8 425 aa14.58□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Lrrc71Q9D3W5 558 aa14.58□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Ptch1Q61115 1434 aa14.58□□□□□ -0.08
Col5a1-201ENSMUST00000028280 D1Pas1P16381 660 aa14.58□□□□□ -0.08
Col5a1-201ENSMUST00000028280 UstQ8BUB6 407 aa14.58□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Abcf3Q8K268 709 aa14.58□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Serpina3kP07759 418 aa14.57□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Pald1P70261 859 aa14.57□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Pcdhb14Q6PB90 796 aa14.57□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Elmo2Q8BHL5 732 aa14.57□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Cse1lQ9ERK4 971 aaKnown RBP14.57□□□□□ -0.08
Col5a1-201ENSMUST00000028280 NuggcD3YWJ0 796 aa14.57□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Gsta1P13745 223 aa14.57□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Ccnd1P25322 295 aa14.57□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Gsta1Q6P8Q0 223 aa14.57□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Zfp454Q80Y34 536 aa14.57□□□□□ -0.08
Col5a1-201ENSMUST00000028280 SgczQ8BX51 311 aa14.57□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Nkd1Q99MH6 471 aa14.57□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Antxr1Q9CZ52 562 aa14.57□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Coro7Q9D2V7 922 aa14.57□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Zfp804bA0A0G2JGH6 1343 aa14.57□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Ccdc149F6V035 524 aa14.57□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Krt6aP50446 553 aa14.57□□□□□ -0.08
Col5a1-201ENSMUST00000028280 PltpP55065 493 aa14.57□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Hnrnph2P70333 449 aaKnown RBP14.57□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Ces1eQ64176 562 aa14.57□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Phf20Q8BLG0 1010 aaKnown RBP14.57□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Znf451Q8C0P7 1056 aa14.57□□□□□ -0.08
Col5a1-201ENSMUST00000028280 CenpxQ8C4X1 78 aa14.57□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Slf1Q8R3P9 1054 aa14.57□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Uxs1Q91XL3 420 aa14.57□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Drap1Q9D6N5 205 aa14.57□□□□□ -0.08
Col5a1-201ENSMUST00000028280 ParvaQ9EPC1 372 aa14.57□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Pkp3Q9QY23 797 aa14.57□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Dhx35A2ACQ1 703 aaKnown RBP14.57□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Gm3424L7N298 263 aa14.57□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Gm8246M0QWX9 263 aa14.57□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Sec22bO08547 215 aaKnown RBP14.57□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Gnat1P20612 350 aa14.57□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Vsnl1P62761 191 aa14.57□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Akap4Q60662 849 aa14.57□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Ccdc17Q8CE13 565 aa14.57□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Appl1Q8K3H0 707 aa14.57□□□□□ -0.08
Col5a1-201ENSMUST00000028280 OtoaQ8K561 1137 aa14.57□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Arhgap23Q69ZH9 1483 aa14.57□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Dsg3O35902 993 aa14.57□□□□□ -0.08
Col5a1-201ENSMUST00000028280 SarsP26638 512 aaKnown RBP14.57□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Znf746Q3U133 652 aa14.57□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Hus1Q8BQY8 280 aa14.57□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Dapk2Q8VDF3 370 aa14.57□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Pfkfb3A7UAK5 555 aa14.57□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Pou4f1P17208 421 aa14.57□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Dynll1P63168 89 aa14.57□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Gm156Q58A37 223 aa14.57□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Map10Q8BJS7 891 aa14.57□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Ccdc28bQ8CEG5 200 aa14.57□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Alas1Q8VC19 642 aa14.57□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Ces1Q8VCC2 565 aa14.57□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Coa7Q921H9 231 aa14.57□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Oas1cQ924S2 362 aa14.57□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Dkc1Q9ESX5 509 aaKnown RBP14.57□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Rnf17Q99MV7 1640 aa14.56□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Angpt2O35608 496 aa14.56□□□□□ -0.08
Col5a1-201ENSMUST00000028280 H2-EaP01904 255 aa14.56□□□□□ -0.08
Col5a1-201ENSMUST00000028280 P04224 255 aa14.56□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Fam120bQ6RI63 786 aa14.56□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Tas2r131Q7M708 310 aa14.56□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Ppm1nQ8BGL1 404 aa14.56□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Gpc3Q8CFZ4 579 aa14.56□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Cdk8Q8R3L8 464 aa14.56□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Gsdmc2Q2KHK6 480 aa14.56□□□□□ -0.08
Col5a1-201ENSMUST00000028280 InscQ3HNM7 579 aa14.56□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Fam193bQ3U2K0 892 aa14.56□□□□□ -0.08
Col5a1-201ENSMUST00000028280 PighQ5M9N4 188 aa14.56□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Ncoa4Q5U4H9 625 aa14.56□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Gja6Q6S5G4 283 aa14.56□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Psmd12Q9D8W5 456 aa14.56□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Rnf19bA2A7Q9 732 aa14.56□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Slc39a2G3X943 309 aa14.56□□□□□ -0.08
Col5a1-201ENSMUST00000028280 PtpreP49446 699 aa14.56□□□□□ -0.08
Col5a1-201ENSMUST00000028280 PRAG1Q571I4 1179 aa14.56□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Tssk1bQ61241 365 aa14.56□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Kcna5Q61762 602 aa14.56□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Naif1Q6PFD7 327 aa14.56□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Abraxas1Q8BPZ8 407 aa14.56□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Ccdc134Q8C7V8 229 aa14.56□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Ulbp1Q8HWA3 334 aa14.56□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Uts2Q9QZQ3 123 aa14.56□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Mms22lB1AUR6 1238 aa14.56□□□□□ -0.08
Retrieved 100 of 22,080 RNA–protein pairs in 27.8 ms