RNA–Protein interactions for RNA: YDR335W

MSN5, Transcript of Karyopherin, yeastyeast

Gene MSN5, Length 3,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSN5YDR335W IPP1P00817 287 aaKnown RBP1.1□□□□□ -2.23
MSN5YDR335W YCR007CP25354 239 aa1.1□□□□□ -2.23
MSN5YDR335W YCR087C-AP37263 153 aa1.1□□□□□ -2.23
MSN5YDR335W AVT5P38176 459 aa1.1□□□□□ -2.23
MSN5YDR335W BIR1P47134 954 aa1.1□□□□□ -2.23
MSN5YDR335W TIS11P47977 285 aa1.1□□□□□ -2.23
MSN5YDR335W ABF2Q02486 183 aa1.1□□□□□ -2.23
MSN5YDR335W RPL21AQ02753 160 aaKnown RBP1.1□□□□□ -2.23
MSN5YDR335W YDC1Q02896 317 aa1.1□□□□□ -2.23
MSN5YDR335W YMD8Q03697 442 aa1.1□□□□□ -2.23
MSN5YDR335W RAV2Q03956 351 aa1.1□□□□□ -2.23
MSN5YDR335W PRM6Q04705 352 aa1.1□□□□□ -2.23
MSN5YDR335W RAD50P12753 1312 aa1.1□□□□□ -2.23
MSN5YDR335W TRP1P00912 224 aa1.1□□□□□ -2.23
MSN5YDR335W RPL25P04456 142 aaKnown RBP1.1□□□□□ -2.23
MSN5YDR335W RPL15AP05748 204 aaKnown RBP1.1□□□□□ -2.23
MSN5YDR335W RPS18AP0CX55 146 aaKnown RBP1.1□□□□□ -2.23
MSN5YDR335W RPS18BP0CX56 146 aaPredicted RBP1.1□□□□□ -2.23
MSN5YDR335W CBS2P14905 389 aa1.1□□□□□ -2.23
MSN5YDR335W YCR022CP25620 114 aa1.1□□□□□ -2.23
MSN5YDR335W ALK2P32789 676 aaPredicted RBP1.1□□□□□ -2.23
MSN5YDR335W FES1P38260 290 aa1.1□□□□□ -2.23
MSN5YDR335W MED8P38304 223 aa1.1□□□□□ -2.23
MSN5YDR335W MTC4P38335 694 aaKnown RBP1.1□□□□□ -2.23
MSN5YDR335W YGP1P38616 354 aaKnown RBP1.1□□□□□ -2.23
MSN5YDR335W PMT4P46971 762 aa1.1□□□□□ -2.23
MSN5YDR335W SOL1P50278 321 aa1.1□□□□□ -2.23
MSN5YDR335W TIM13P53299 105 aa1.1□□□□□ -2.23
MSN5YDR335W PDR17P53844 350 aa1.1□□□□□ -2.23
MSN5YDR335W RPL15BP54780 204 aaPredicted RBP1.1□□□□□ -2.23
MSN5YDR335W ELP3Q02908 557 aaKnown RBP1.1□□□□□ -2.23
MSN5YDR335W SDC1Q03323 175 aa1.1□□□□□ -2.23
MSN5YDR335W INP1Q03694 420 aa1.1□□□□□ -2.23
MSN5YDR335W SPC24Q04477 213 aa1.1□□□□□ -2.23
MSN5YDR335W DYN3Q04949 312 aa1.1□□□□□ -2.23
MSN5YDR335W FMP42Q04991 504 aa1.1□□□□□ -2.23
MSN5YDR335W FLO1P32768 1537 aa1.1□□□□□ -2.23
MSN5YDR335W HEM4P06174 275 aa1.1□□□□□ -2.23
MSN5YDR335W FCY2P17064 533 aa1.1□□□□□ -2.23
MSN5YDR335W PET9P18239 318 aaKnown RBP1.1□□□□□ -2.23
MSN5YDR335W IFM1P25038 676 aa1.1□□□□□ -2.23
MSN5YDR335W CPR4P25334 318 aa1.1□□□□□ -2.23
MSN5YDR335W FMP46P36141 133 aaKnown RBP1.1□□□□□ -2.23
MSN5YDR335W SOL2P37262 315 aa1.1□□□□□ -2.23
MSN5YDR335W YBR285WP38354 144 aa1.1□□□□□ -2.23
MSN5YDR335W YHL049CP38722 271 aa1.1□□□□□ -2.23
MSN5YDR335W EDC3P39998 551 aaKnown RBP1.1□□□□□ -2.23
MSN5YDR335W TIF34P40217 347 aaKnown RBP1.1□□□□□ -2.23
MSN5YDR335W YIL024CP40543 189 aa1.1□□□□□ -2.23
MSN5YDR335W YJR111CP47148 283 aaKnown RBP1.1□□□□□ -2.23
MSN5YDR335W RNY1Q02933 434 aaKnown RBP1.1□□□□□ -2.23
MSN5YDR335W YML018CQ03730 393 aa1.1□□□□□ -2.23
MSN5YDR335W YDR124WQ04608 324 aa1.1□□□□□ -2.23
MSN5YDR335W YMR253CQ04835 414 aa1.1□□□□□ -2.23
MSN5YDR335W IES4Q08561 116 aa1.1□□□□□ -2.23
MSN5YDR335W MMT2Q08970 484 aa1.1□□□□□ -2.23
MSN5YDR335W ERV2Q12284 196 aa1.1□□□□□ -2.23
MSN5YDR335W AGC1Q12482 902 aa1.1□□□□□ -2.23
MSN5YDR335W YIR021W-AQ3E739 70 aa1.1□□□□□ -2.23
MSN5YDR335W YLR422WQ06409 1932 aa1.09□□□□□ -2.23
MSN5YDR335W RPS1AP33442 255 aaKnown RBP1.09□□□□□ -2.23
MSN5YDR335W CLG1P35190 452 aa1.09□□□□□ -2.23
MSN5YDR335W SFK1P35735 353 aa1.09□□□□□ -2.23
MSN5YDR335W PMU1P36069 295 aa1.09□□□□□ -2.23
MSN5YDR335W HOT13P36078 116 aa1.09□□□□□ -2.23
MSN5YDR335W SLM6P38343 150 aa1.09□□□□□ -2.23
MSN5YDR335W AVT2P39981 480 aa1.09□□□□□ -2.23
MSN5YDR335W BOR1P53838 576 aa1.09□□□□□ -2.23
MSN5YDR335W RNH201P53942 307 aa1.09□□□□□ -2.23
MSN5YDR335W YPL113CQ02961 396 aa1.09□□□□□ -2.23
MSN5YDR335W HNT1Q04344 158 aaKnown RBP1.09□□□□□ -2.23
MSN5YDR335W PAL1Q05518 499 aaKnown RBP1.09□□□□□ -2.23
MSN5YDR335W YNG1Q08465 219 aa1.09□□□□□ -2.23
MSN5YDR335W CSM4Q08955 156 aa1.09□□□□□ -2.23
MSN5YDR335W TAF10Q12030 206 aa1.09□□□□□ -2.23
MSN5YDR335W SME1Q12330 94 aaPredicted RBP1.09□□□□□ -2.23
MSN5YDR335W PST1Q12355 444 aa1.09□□□□□ -2.23
MSN5YDR335W BBP1Q12365 385 aa1.09□□□□□ -2.23
MSN5YDR335W NAG1Q8TGN9 163 aa1.09□□□□□ -2.23
MSN5YDR335W ATS1P31386 333 aa1.09□□□□□ -2.24
MSN5YDR335W SHE3P38272 425 aaKnown RBP1.09□□□□□ -2.24
MSN5YDR335W SER33P40510 469 aa1.09□□□□□ -2.24
MSN5YDR335W CAT5P41735 233 aa1.09□□□□□ -2.24
MSN5YDR335W RPE1P46969 238 aa1.09□□□□□ -2.24
MSN5YDR335W CRH1P53301 507 aa1.09□□□□□ -2.24
MSN5YDR335W SWT21P53873 357 aaPredicted RBP1.09□□□□□ -2.24
MSN5YDR335W FMP41P53889 259 aaKnown RBP1.09□□□□□ -2.24
MSN5YDR335W HHT1P61830 136 aa1.09□□□□□ -2.24
MSN5YDR335W YMR244WQ04018 355 aa1.09□□□□□ -2.24
MSN5YDR335W YLR446WQ06204 433 aa1.09□□□□□ -2.24
MSN5YDR335W DTD1Q07648 150 aaKnown RBP1.09□□□□□ -2.24
MSN5YDR335W YOL029CQ08187 201 aa1.09□□□□□ -2.24
MSN5YDR335W YLR046CQ12253 270 aa1.09□□□□□ -2.24
MSN5YDR335W SFM1Q12314 213 aa1.09□□□□□ -2.24
MSN5YDR335W TDA8Q6B2U8 126 aa1.09□□□□□ -2.24
MSN5YDR335W RPO26P20435 155 aa1.09□□□□□ -2.24
MSN5YDR335W YCR025CP25352 136 aa1.09□□□□□ -2.24
MSN5YDR335W SIP2P34164 415 aaKnown RBP1.09□□□□□ -2.24
MSN5YDR335W YKL187CP34231 750 aa1.09□□□□□ -2.24
MSN5YDR335W SKG1P36169 355 aa1.09□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 23 ms