RNA–Protein interactions for RNA: ENST00000641458.1

RGPD1-206, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 BASIC

Gene RGPD1, Length 5,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-206ENST00000641458 POMGNT1Q8WZA1 660 aa6.69□□□□□ -1.34
RGPD1-206ENST00000641458 PGBD4Q96DM1 585 aa6.69□□□□□ -1.34
RGPD1-206ENST00000641458 CCDC43Q96MW1 224 aaKnown RBP6.69□□□□□ -1.34
RGPD1-206ENST00000641458 C11orf49Q9H6J7 331 aa6.69□□□□□ -1.34
RGPD1-206ENST00000641458 STARD7Q9NQZ5 370 aa6.69□□□□□ -1.34
RGPD1-206ENST00000641458 TOPORSQ9NS56 1045 aaPredicted RBP6.69□□□□□ -1.34
RGPD1-206ENST00000641458 COMMD8Q9NX08 183 aa6.69□□□□□ -1.34
RGPD1-206ENST00000641458 LRRIQ4A6NIV6 560 aa6.69□□□□□ -1.34
RGPD1-206ENST00000641458 EPHB6O15197 1021 aa6.69□□□□□ -1.34
RGPD1-206ENST00000641458 PRLRP16471 622 aa6.69□□□□□ -1.34
RGPD1-206ENST00000641458 DLG4P78352 724 aa6.69□□□□□ -1.34
RGPD1-206ENST00000641458 IRX5P78411 483 aaPredicted RBP6.69□□□□□ -1.34
RGPD1-206ENST00000641458 CEP135Q66GS9 1140 aa6.69□□□□□ -1.34
RGPD1-206ENST00000641458 KSR1Q8IVT5 923 aa6.69□□□□□ -1.34
RGPD1-206ENST00000641458 ST3GAL5Q9UNP4 418 aa6.69□□□□□ -1.34
RGPD1-206ENST00000641458 C5orf67F2Z3F1 127 aa6.68□□□□□ -1.34
RGPD1-206ENST00000641458 B4GALT5O43286 388 aa6.68□□□□□ -1.34
RGPD1-206ENST00000641458 SETSIPP0DME0 302 aa6.68□□□□□ -1.34
RGPD1-206ENST00000641458 UNGP13051 313 aaPredicted RBP6.68□□□□□ -1.34
RGPD1-206ENST00000641458 BPIFB4P59827 614 aa6.68□□□□□ -1.34
RGPD1-206ENST00000641458 CETN1Q12798 172 aa6.68□□□□□ -1.34
RGPD1-206ENST00000641458 ZNF618Q5T7W0 954 aa6.68□□□□□ -1.34
RGPD1-206ENST00000641458 MFSD5Q6N075 450 aa6.68□□□□□ -1.34
RGPD1-206ENST00000641458 NPAS4Q8IUM7 802 aa6.68□□□□□ -1.34
RGPD1-206ENST00000641458 TMEM86AQ8N2M4 240 aa6.68□□□□□ -1.34
RGPD1-206ENST00000641458 ADPGKQ9BRR6 497 aa6.68□□□□□ -1.34
RGPD1-206ENST00000641458 PRO3102Q9H379 93 aa6.68□□□□□ -1.34
RGPD1-206ENST00000641458 PADI3Q9ULW8 664 aa6.68□□□□□ -1.34
RGPD1-206ENST00000641458 IPPQ9Y573 584 aa6.68□□□□□ -1.34
RGPD1-206ENST00000641458 CCP110O43303 1012 aa6.68□□□□□ -1.34
RGPD1-206ENST00000641458 MGEA5O60502 916 aa6.68□□□□□ -1.34
RGPD1-206ENST00000641458 OFD1O75665 1012 aa6.68□□□□□ -1.34
RGPD1-206ENST00000641458 CCDC172P0C7W6 258 aa6.68□□□□□ -1.34
RGPD1-206ENST00000641458 SOX5P35711 763 aa6.68□□□□□ -1.34
RGPD1-206ENST00000641458 NCBP1Q09161 790 aaKnown RBP6.68□□□□□ -1.34
RGPD1-206ENST00000641458 PTP4A2Q12974 167 aa6.68□□□□□ -1.34
RGPD1-206ENST00000641458 REXO1L1PQ8IX06 675 aa6.68□□□□□ -1.34
RGPD1-206ENST00000641458 ZSWIM2Q8NEG5 633 aa6.68□□□□□ -1.34
RGPD1-206ENST00000641458 WHAMMQ8TF30 809 aa6.68□□□□□ -1.34
RGPD1-206ENST00000641458 ZBTB45Q96K62 511 aaPredicted RBP6.68□□□□□ -1.34
RGPD1-206ENST00000641458 ACAP3Q96P50 834 aa6.68□□□□□ -1.34
RGPD1-206ENST00000641458 KIFC3Q9BVG8 833 aa6.68□□□□□ -1.34
RGPD1-206ENST00000641458 CCDC94Q9BW85 323 aaPredicted RBP6.68□□□□□ -1.34
RGPD1-206ENST00000641458 TRIM5Q9C035 493 aa6.68□□□□□ -1.34
RGPD1-206ENST00000641458 ABCB6Q9NP58 842 aa6.68□□□□□ -1.34
RGPD1-206ENST00000641458 ARHGAP20Q9P2F6 1191 aa6.68□□□□□ -1.34
RGPD1-206ENST00000641458 FAM92AA1XBS5 289 aa6.68□□□□□ -1.34
RGPD1-206ENST00000641458 CCDC169A6NNP5 214 aa6.68□□□□□ -1.34
RGPD1-206ENST00000641458 SOBPA7XYQ1 873 aa6.68□□□□□ -1.34
RGPD1-206ENST00000641458 SSBP05455 408 aaKnown RBP eCLIP6.68□□□□□ -1.34
RGPD1-206ENST00000641458 MYL7Q01449 175 aa6.68□□□□□ -1.34
RGPD1-206ENST00000641458 SMARCB1Q12824 385 aa6.68□□□□□ -1.34
RGPD1-206ENST00000641458 MTFR1Q15390 333 aa6.68□□□□□ -1.34
RGPD1-206ENST00000641458 IQCEQ6IPM2 695 aa6.68□□□□□ -1.34
RGPD1-206ENST00000641458 CYP26C1Q6V0L0 522 aa6.68□□□□□ -1.34
RGPD1-206ENST00000641458 CLP1Q92989 425 aaKnown RBP6.68□□□□□ -1.34
RGPD1-206ENST00000641458 APOBEC3GQ9HC16 384 aaKnown RBP6.68□□□□□ -1.34
RGPD1-206ENST00000641458 CSNK1G1Q9HCP0 422 aa6.68□□□□□ -1.34
RGPD1-206ENST00000641458 TAB2Q9NYJ8 693 aa6.68□□□□□ -1.34
RGPD1-206ENST00000641458 REXO2Q9Y3B8 237 aaKnown RBP6.68□□□□□ -1.34
RGPD1-206ENST00000641458 ZNF487B1APH4 448 aa6.68□□□□□ -1.34
RGPD1-206ENST00000641458 BMP8BP34820 402 aa6.68□□□□□ -1.34
RGPD1-206ENST00000641458 MTIF2P46199 727 aaKnown RBP6.68□□□□□ -1.34
RGPD1-206ENST00000641458 STX17P56962 302 aa6.68□□□□□ -1.34
RGPD1-206ENST00000641458 YWHAEP62258 255 aaKnown RBP6.68□□□□□ -1.34
RGPD1-206ENST00000641458 CENPCQ03188 943 aa6.68□□□□□ -1.34
RGPD1-206ENST00000641458 SLC18A3Q16572 532 aa6.68□□□□□ -1.34
RGPD1-206ENST00000641458 PPP1R15BQ5SWA1 713 aa6.68□□□□□ -1.34
RGPD1-206ENST00000641458 ZSCAN30Q86W11 494 aa6.68□□□□□ -1.34
RGPD1-206ENST00000641458 PHF13Q86YI8 300 aaPredicted RBP6.68□□□□□ -1.34
RGPD1-206ENST00000641458 NELFCDQ8IXH7 590 aa6.68□□□□□ -1.34
RGPD1-206ENST00000641458 CMTR2Q8IYT2 770 aaKnown RBP6.68□□□□□ -1.34
RGPD1-206ENST00000641458 HACE1Q8IYU2 909 aa6.68□□□□□ -1.34
RGPD1-206ENST00000641458 ZMAT2Q96NC0 199 aaKnown RBP6.68□□□□□ -1.34
RGPD1-206ENST00000641458 IKZF4Q9H2S9 585 aa6.68□□□□□ -1.34
RGPD1-206ENST00000641458 ASNSD1Q9NWL6 643 aa6.68□□□□□ -1.34
RGPD1-206ENST00000641458 SMIM28A0A1B0GU29 152 aa6.67□□□□□ -1.34
RGPD1-206ENST00000641458 LACTBL1A8MY62 500 aa6.67□□□□□ -1.34
RGPD1-206ENST00000641458 TISP43B9A030 160 aa6.67□□□□□ -1.34
RGPD1-206ENST00000641458 BHMG1C9JSJ3 638 aaPredicted RBP6.67□□□□□ -1.34
RGPD1-206ENST00000641458 SERPINC1P01008 464 aa6.67□□□□□ -1.34
RGPD1-206ENST00000641458 VTNP04004 478 aa6.67□□□□□ -1.34
RGPD1-206ENST00000641458 UBXN1Q04323 297 aa6.67□□□□□ -1.34
RGPD1-206ENST00000641458 EIF4EBP2Q13542 120 aaPredicted RBP6.67□□□□□ -1.34
RGPD1-206ENST00000641458 UPP1Q16831 310 aa6.67□□□□□ -1.34
RGPD1-206ENST00000641458 ZNF568Q3ZCX4 644 aa6.67□□□□□ -1.34
RGPD1-206ENST00000641458 E4F1Q66K89 784 aaPredicted RBP6.67□□□□□ -1.34
RGPD1-206ENST00000641458 ZNF397Q8NF99 534 aaPredicted RBP6.67□□□□□ -1.34
RGPD1-206ENST00000641458 LUC7L2Q9Y383 392 aaKnown RBP6.67□□□□□ -1.34
RGPD1-206ENST00000641458 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.67□□□□□ -1.34
RGPD1-206ENST00000641458 ENPP3O14638 875 aa6.67□□□□□ -1.34
RGPD1-206ENST00000641458 CILPO75339 1184 aa6.67□□□□□ -1.34
RGPD1-206ENST00000641458 OAZ2O95190 189 aa6.67□□□□□ -1.34
RGPD1-206ENST00000641458 MARK3P27448 753 aa6.67□□□□□ -1.34
RGPD1-206ENST00000641458 CLCN1P35523 988 aa6.67□□□□□ -1.34
RGPD1-206ENST00000641458 TERF1P54274 439 aa6.67□□□□□ -1.34
RGPD1-206ENST00000641458 ITIH3Q06033 890 aa6.67□□□□□ -1.34
RGPD1-206ENST00000641458 FAM71BQ8TC56 605 aa6.67□□□□□ -1.34
RGPD1-206ENST00000641458 NIF3L1Q9GZT8 377 aa6.67□□□□□ -1.34
RGPD1-206ENST00000641458 RPF1Q9H9Y2 349 aaKnown RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms