RNA–Protein interactions for RNA: ENST00000640287.1

PAX6-268, Transcript of paired box 6, humanhuman

TSL 1 (best)

Gene PAX6, Length 1,485 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-268ENST00000640287 MKNK1Q9BUB5 465 aa16.47■□□□□ 0.23
PAX6-268ENST00000640287 SRRTQ9BXP5 876 aaKnown RBP16.47■□□□□ 0.23
PAX6-268ENST00000640287 MTMR12Q9C0I1 747 aa16.47■□□□□ 0.23
PAX6-268ENST00000640287 NAT10Q9H0A0 1025 aaKnown RBP16.47■□□□□ 0.23
PAX6-268ENST00000640287 DNAJC25Q9H1X3 360 aa16.47■□□□□ 0.23
PAX6-268ENST00000640287 TTYH1Q9H313 450 aaPredicted RBP16.47■□□□□ 0.23
PAX6-268ENST00000640287 R3HCC1Q9Y3T6 440 aaKnown RBP16.47■□□□□ 0.23
PAX6-268ENST00000640287 TADA2AO75478 443 aa16.46■□□□□ 0.23
PAX6-268ENST00000640287 FGF18O76093 207 aa16.46■□□□□ 0.23
PAX6-268ENST00000640287 B3GAT3O94766 335 aa16.46■□□□□ 0.23
PAX6-268ENST00000640287 CSPG5O95196 566 aa16.46■□□□□ 0.23
PAX6-268ENST00000640287 VAMP7P51809 220 aa16.46■□□□□ 0.23
PAX6-268ENST00000640287 GPM6BQ13491 265 aa16.46■□□□□ 0.23
PAX6-268ENST00000640287 ZBTB6Q15916 424 aa16.46■□□□□ 0.23
PAX6-268ENST00000640287 DUOXA2Q1HG44 320 aa16.46■□□□□ 0.23
PAX6-268ENST00000640287 SPATA1Q5VX52 437 aa16.46■□□□□ 0.23
PAX6-268ENST00000640287 C11orf57Q6ZUT1 292 aaPredicted RBP16.46■□□□□ 0.23
PAX6-268ENST00000640287 TMEM173Q86WV6 379 aaPredicted RBP16.46■□□□□ 0.23
PAX6-268ENST00000640287 ZC3H3Q8IXZ2 948 aaKnown RBP16.46■□□□□ 0.23
PAX6-268ENST00000640287 SLC39A11Q8N1S5 342 aa16.46■□□□□ 0.23
PAX6-268ENST00000640287 IGSF21Q96ID5 467 aa16.46■□□□□ 0.23
PAX6-268ENST00000640287 FAM84AQ96KN4 292 aa16.46■□□□□ 0.23
PAX6-268ENST00000640287 GZF1Q9H116 711 aaPredicted RBP16.46■□□□□ 0.23
PAX6-268ENST00000640287 CDH23Q9H251 3354 aa16.46■□□□□ 0.23
PAX6-268ENST00000640287 ALG13Q9NP73 1137 aaKnown RBP16.46■□□□□ 0.23
PAX6-268ENST00000640287 INTS13Q9NVM9 706 aa16.46■□□□□ 0.23
PAX6-268ENST00000640287 DPP3Q9NY33 737 aa16.46■□□□□ 0.23
PAX6-268ENST00000640287 LRRIQ3A6PVS8 624 aaPredicted RBP16.45■□□□□ 0.22
PAX6-268ENST00000640287 C5orf67F2Z3F1 127 aa16.45■□□□□ 0.22
PAX6-268ENST00000640287 F8W810 466 aa16.45■□□□□ 0.22
PAX6-268ENST00000640287 CLSTN1O94985 981 aa16.45■□□□□ 0.22
PAX6-268ENST00000640287 KIF4AO95239 1232 aa16.45■□□□□ 0.22
PAX6-268ENST00000640287 KRT19P08727 400 aa16.45■□□□□ 0.22
PAX6-268ENST00000640287 RPL9P32969 192 aaKnown RBP16.45■□□□□ 0.22
PAX6-268ENST00000640287 BFSP1Q12934 665 aa16.45■□□□□ 0.22
PAX6-268ENST00000640287 UPP1Q16831 310 aa16.45■□□□□ 0.22
PAX6-268ENST00000640287 ANO6Q4KMQ2 910 aa16.45■□□□□ 0.22
PAX6-268ENST00000640287 DCAF17Q5H9S7 520 aaPredicted RBP16.45■□□□□ 0.22
PAX6-268ENST00000640287 TCERG1LQ5VWI1 586 aa16.45■□□□□ 0.22
PAX6-268ENST00000640287 DCLRE1AQ6PJP8 1040 aa16.45■□□□□ 0.22
PAX6-268ENST00000640287 FILIP1Q7Z7B0 1213 aa16.45■□□□□ 0.22
PAX6-268ENST00000640287 TMEM130Q8N3G9 435 aa16.45■□□□□ 0.22
PAX6-268ENST00000640287 OR5B17Q8NGF7 314 aa16.45■□□□□ 0.22
PAX6-268ENST00000640287 PARD3BQ8TEW8 1205 aa16.45■□□□□ 0.22
PAX6-268ENST00000640287 GDPD5Q8WTR4 605 aa16.45■□□□□ 0.22
PAX6-268ENST00000640287 MMRN2Q9H8L6 949 aa16.45■□□□□ 0.22
PAX6-268ENST00000640287 ARMCX3Q9UH62 379 aaPredicted RBP16.45■□□□□ 0.22
PAX6-268ENST00000640287 PUF60Q9UHX1 559 aaKnown RBP16.45■□□□□ 0.22
PAX6-268ENST00000640287 NUB1Q9Y5A7 615 aa16.45■□□□□ 0.22
PAX6-268ENST00000640287 TRIP11Q15643 1979 aa16.45■□□□□ 0.22
PAX6-268ENST00000640287 PTPRJQ12913 1337 aa16.44■□□□□ 0.22
PAX6-268ENST00000640287 KIAA1671Q9BY89 1806 aa16.44■□□□□ 0.22
PAX6-268ENST00000640287 EPOPA6NHQ4 379 aa16.44■□□□□ 0.22
PAX6-268ENST00000640287 H3BNC9 293 aa16.44■□□□□ 0.22
PAX6-268ENST00000640287 GNA14O95837 355 aa16.44■□□□□ 0.22
PAX6-268ENST00000640287 ITGB1P05556 798 aa16.44■□□□□ 0.22
PAX6-268ENST00000640287 TRIM49P0CI25 452 aa16.44■□□□□ 0.22
PAX6-268ENST00000640287 TRIM49CP0CI26 452 aa16.44■□□□□ 0.22
PAX6-268ENST00000640287 FXR1P51114 621 aaKnown RBP eCLIP16.44■□□□□ 0.22
PAX6-268ENST00000640287 DLG4P78352 724 aa16.44■□□□□ 0.22
PAX6-268ENST00000640287 BIRC3Q13489 604 aa16.44■□□□□ 0.22
PAX6-268ENST00000640287 GPR153Q6NV75 609 aa16.44■□□□□ 0.22
PAX6-268ENST00000640287 PLEKHO2Q8TD55 490 aa16.44■□□□□ 0.22
PAX6-268ENST00000640287 TMC2Q8TDI7 906 aa16.44■□□□□ 0.22
PAX6-268ENST00000640287 MED15Q96RN5 788 aa16.44■□□□□ 0.22
PAX6-268ENST00000640287 PRDM12Q9H4Q4 367 aa16.44■□□□□ 0.22
PAX6-268ENST00000640287 METTL14Q9HCE5 456 aaKnown RBP16.44■□□□□ 0.22
PAX6-268ENST00000640287 MARCH5Q9NX47 278 aa16.44■□□□□ 0.22
PAX6-268ENST00000640287 ADAM28Q9UKQ2 775 aa16.44■□□□□ 0.22
PAX6-268ENST00000640287 NLRC5Q86WI3 1866 aa16.44■□□□□ 0.22
PAX6-268ENST00000640287 CHD7Q9P2D1 2997 aa16.44■□□□□ 0.22
PAX6-268ENST00000640287 SZT2Q5T011 3432 aa16.43■□□□□ 0.22
PAX6-268ENST00000640287 RFXAPO00287 272 aa16.43■□□□□ 0.22
PAX6-268ENST00000640287 PHACTR2O75167 634 aa16.43■□□□□ 0.22
PAX6-268ENST00000640287 ITGB3P05106 788 aa16.43■□□□□ 0.22
PAX6-268ENST00000640287 LRPAP1P30533 357 aa16.43■□□□□ 0.22
PAX6-268ENST00000640287 POLR2BP30876 1174 aaKnown RBP16.43■□□□□ 0.22
PAX6-268ENST00000640287 CA8P35219 290 aa16.43■□□□□ 0.22
PAX6-268ENST00000640287 AP3M2P53677 418 aa16.43■□□□□ 0.22
PAX6-268ENST00000640287 PLCB3Q01970 1234 aa16.43■□□□□ 0.22
PAX6-268ENST00000640287 GRIN2CQ14957 1233 aa16.43■□□□□ 0.22
PAX6-268ENST00000640287 C9orf57Q5W0N0 161 aa16.43■□□□□ 0.22
PAX6-268ENST00000640287 Q7L0L9 218 aa16.43■□□□□ 0.22
PAX6-268ENST00000640287 FRMD5Q7Z6J6 570 aa16.43■□□□□ 0.22
PAX6-268ENST00000640287 C1orf127Q8N9H9 656 aa16.43■□□□□ 0.22
PAX6-268ENST00000640287 BCL7CQ8WUZ0 217 aaPredicted RBP16.43■□□□□ 0.22
PAX6-268ENST00000640287 MAGEC2Q9UBF1 373 aaPredicted RBP16.43■□□□□ 0.22
PAX6-268ENST00000640287 ITGA11Q9UKX5 1188 aa16.43■□□□□ 0.22
PAX6-268ENST00000640287 SF3B1O75533 1304 aaKnown RBP eCLIP16.43■□□□□ 0.228e-6■■■■■ 107
PAX6-268ENST00000640287 TRPC3Q13507 836 aa16.42■□□□□ 0.22
PAX6-268ENST00000640287 FUT10Q6P4F1 479 aa16.42■□□□□ 0.22
PAX6-268ENST00000640287 TRAPPC11Q7Z392 1133 aa16.42■□□□□ 0.22
PAX6-268ENST00000640287 FAM114A1Q8IWE2 563 aa16.42■□□□□ 0.22
PAX6-268ENST00000640287 DEFB123Q8N688 67 aa16.42■□□□□ 0.22
PAX6-268ENST00000640287 C3orf58Q8NDZ4 430 aa16.42■□□□□ 0.22
PAX6-268ENST00000640287 ENOX1Q8TC92 643 aaKnown RBP16.42■□□□□ 0.22
PAX6-268ENST00000640287 POF1BQ8WVV4 589 aa16.42■□□□□ 0.22
PAX6-268ENST00000640287 CNOT6LQ96LI5 555 aaKnown RBP16.42■□□□□ 0.22
PAX6-268ENST00000640287 ZNF560Q96MR9 790 aa16.42■□□□□ 0.22
PAX6-268ENST00000640287 AGAP1Q9UPQ3 857 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms