RNA–Protein interactions for RNA: ENST00000640131.1

SPIN3-236, Transcript of spindlin family member 3, humanhuman

TSL 1 (best)

Gene SPIN3, Length 2,938 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-236ENST00000640131 GPR88Q9GZN0 384 aa13.19□□□□□ -0.3
SPIN3-236ENST00000640131 RGPD3A6NKT7 1758 aaPredicted RBP13.19□□□□□ -0.3
SPIN3-236ENST00000640131 RGPD4Q7Z3J3 1758 aa13.19□□□□□ -0.3
SPIN3-236ENST00000640131 ZNF862O60290 1169 aa13.19□□□□□ -0.3
SPIN3-236ENST00000640131 HEXIM1O94992 359 aaKnown RBP13.19□□□□□ -0.3
SPIN3-236ENST00000640131 FAM153BP0C7A2 387 aa13.19□□□□□ -0.3
SPIN3-236ENST00000640131 PLS3P13797 630 aa13.19□□□□□ -0.3
SPIN3-236ENST00000640131 YY1P25490 414 aa13.19□□□□□ -0.3
SPIN3-236ENST00000640131 SSTR3P32745 418 aaPredicted RBP13.19□□□□□ -0.3
SPIN3-236ENST00000640131 VAMP7P51809 220 aa13.19□□□□□ -0.3
SPIN3-236ENST00000640131 EPHB4P54760 987 aa13.19□□□□□ -0.3
SPIN3-236ENST00000640131 CNTN2Q02246 1040 aa13.19□□□□□ -0.3
SPIN3-236ENST00000640131 MAP3K10Q02779 954 aa13.19□□□□□ -0.3
SPIN3-236ENST00000640131 ZNF211Q13398 564 aaPredicted RBP13.19□□□□□ -0.3
SPIN3-236ENST00000640131 IFI16Q16666 785 aaKnown RBP13.19□□□□□ -0.3
SPIN3-236ENST00000640131 FAM153CQ494X1 144 aa13.19□□□□□ -0.3
SPIN3-236ENST00000640131 CFAP58Q5T655 872 aa13.19□□□□□ -0.3
SPIN3-236ENST00000640131 APBB1IPQ7Z5R6 666 aaPredicted RBP13.19□□□□□ -0.3
SPIN3-236ENST00000640131 DDX42Q86XP3 938 aaKnown RBP eCLIP13.19□□□□□ -0.3
SPIN3-236ENST00000640131 PPM1KQ8N3J5 372 aa13.19□□□□□ -0.3
SPIN3-236ENST00000640131 RNF10Q8N5U6 811 aaKnown RBP13.19□□□□□ -0.3
SPIN3-236ENST00000640131 PI4K2AQ9BTU6 479 aa13.19□□□□□ -0.3
SPIN3-236ENST00000640131 VCXQ9H320 206 aa13.19□□□□□ -0.3
SPIN3-236ENST00000640131 APEX2Q9UBZ4 518 aa13.19□□□□□ -0.3
SPIN3-236ENST00000640131 FAM153AQ9UHL3 310 aa13.19□□□□□ -0.3
SPIN3-236ENST00000640131 DENND3A2RUS2 1198 aa13.18□□□□□ -0.3
SPIN3-236ENST00000640131 LSM1O15116 133 aaKnown RBP13.18□□□□□ -0.3
SPIN3-236ENST00000640131 TRAPPC3O43617 180 aa13.18□□□□□ -0.3
SPIN3-236ENST00000640131 CCDC166P0CW27 439 aa13.18□□□□□ -0.3
SPIN3-236ENST00000640131 TGFB2P61812 414 aa13.18□□□□□ -0.3
SPIN3-236ENST00000640131 MTERF2Q49AM1 385 aa13.18□□□□□ -0.3
SPIN3-236ENST00000640131 AADACL2Q6P093 401 aa13.18□□□□□ -0.3
SPIN3-236ENST00000640131 PEX26Q7Z412 305 aa13.18□□□□□ -0.3
SPIN3-236ENST00000640131 SCYL3Q8IZE3 742 aa13.18□□□□□ -0.3
SPIN3-236ENST00000640131 NEK9Q8TD19 979 aa13.18□□□□□ -0.3
SPIN3-236ENST00000640131 LZICQ8WZA0 190 aa13.18□□□□□ -0.3
SPIN3-236ENST00000640131 THAP2Q9H0W7 228 aa13.18□□□□□ -0.3
SPIN3-236ENST00000640131 VCX3BQ9H321 246 aa13.18□□□□□ -0.3
SPIN3-236ENST00000640131 VCX3AQ9NNX9 186 aa13.18□□□□□ -0.3
SPIN3-236ENST00000640131 TRPV5Q9NQA5 729 aa13.18□□□□□ -0.3
SPIN3-236ENST00000640131 DMAC2Q9NW81 257 aa13.18□□□□□ -0.3
SPIN3-236ENST00000640131 SEL1LQ9UBV2 794 aa13.18□□□□□ -0.3
SPIN3-236ENST00000640131 ZNF233A6NK53 670 aa13.18□□□□□ -0.3
SPIN3-236ENST00000640131 WDR64B1ANS9 1081 aa13.18□□□□□ -0.3
SPIN3-236ENST00000640131 RGS20O76081 388 aa13.18□□□□□ -0.3
SPIN3-236ENST00000640131 GSTA1P08263 222 aa13.18□□□□□ -0.3
SPIN3-236ENST00000640131 ITGA4P13612 1032 aa13.18□□□□□ -0.3
SPIN3-236ENST00000640131 KLC1Q07866 573 aa13.18□□□□□ -0.3
SPIN3-236ENST00000640131 EPC2Q52LR7 807 aa13.18□□□□□ -0.3
SPIN3-236ENST00000640131 EMBQ6PCB8 327 aa13.18□□□□□ -0.3
SPIN3-236ENST00000640131 CPLX4Q7Z7G2 160 aa13.18□□□□□ -0.3
SPIN3-236ENST00000640131 VPS36Q86VN1 386 aa13.18□□□□□ -0.3
SPIN3-236ENST00000640131 CPNE8Q86YQ8 564 aa13.18□□□□□ -0.3
SPIN3-236ENST00000640131 SLC15A3Q8IY34 581 aa13.18□□□□□ -0.3
SPIN3-236ENST00000640131 ARFGAP2Q8N6H7 521 aa13.18□□□□□ -0.3
SPIN3-236ENST00000640131 DHX38Q92620 1227 aaKnown RBP13.18□□□□□ -0.3
SPIN3-236ENST00000640131 ATP6V1G3Q96LB4 118 aa13.18□□□□□ -0.3
SPIN3-236ENST00000640131 ACCSQ96QU6 501 aa13.18□□□□□ -0.3
SPIN3-236ENST00000640131 DDX47Q9H0S4 455 aaKnown RBP13.18□□□□□ -0.3
SPIN3-236ENST00000640131 R3HDMLQ9H3Y0 253 aa13.18□□□□□ -0.3
SPIN3-236ENST00000640131 C5orf60A6NFR6 353 aa13.17□□□□□ -0.3
SPIN3-236ENST00000640131 HARSP12081 509 aaKnown RBP13.17□□□□□ -0.3
SPIN3-236ENST00000640131 TNFAIP3P21580 790 aa13.17□□□□□ -0.3
SPIN3-236ENST00000640131 HOXA7P31268 230 aaPredicted RBP13.17□□□□□ -0.3
SPIN3-236ENST00000640131 ALDH5A1P51649 535 aaPredicted RBP13.17□□□□□ -0.3
SPIN3-236ENST00000640131 PSMC5P62195 406 aa13.17□□□□□ -0.3
SPIN3-236ENST00000640131 LONP2Q86WA8 852 aa13.17□□□□□ -0.3
SPIN3-236ENST00000640131 CCDC60Q8IWA6 550 aaPredicted RBP13.17□□□□□ -0.3
SPIN3-236ENST00000640131 TPCN2Q8NHX9 752 aa13.17□□□□□ -0.3
SPIN3-236ENST00000640131 ZNF668Q96K58 619 aaPredicted RBP13.17□□□□□ -0.3
SPIN3-236ENST00000640131 STIM2Q9P246 746 aa13.17□□□□□ -0.3
SPIN3-236ENST00000640131 SLC12A4Q9UP95 1085 aa13.17□□□□□ -0.3
SPIN3-236ENST00000640131 WDR81Q562E7 1941 aa13.17□□□□□ -0.3
SPIN3-236ENST00000640131 ADGRA3Q8IWK6 1321 aa13.17□□□□□ -0.3
SPIN3-236ENST00000640131 DNAH12Q6ZR08 3092 aa13.17□□□□□ -0.3
SPIN3-236ENST00000640131 HNRNPCP07910 306 aaKnown RBP eCLIP13.17□□□□□ -0.3
SPIN3-236ENST00000640131 ADSSP30520 456 aa13.17□□□□□ -0.3
SPIN3-236ENST00000640131 GSTT1P30711 240 aa13.17□□□□□ -0.3
SPIN3-236ENST00000640131 NPTX2P47972 431 aa13.17□□□□□ -0.3
SPIN3-236ENST00000640131 HIRAP54198 1017 aaPredicted RBP13.17□□□□□ -0.3
SPIN3-236ENST00000640131 OXCT1P55809 520 aa13.17□□□□□ -0.3
SPIN3-236ENST00000640131 HDAC4P56524 1084 aa13.17□□□□□ -0.3
SPIN3-236ENST00000640131 PLOD1Q02809 727 aaPredicted RBP13.17□□□□□ -0.3
SPIN3-236ENST00000640131 P3H1Q32P28 736 aa13.17□□□□□ -0.3
SPIN3-236ENST00000640131 MAP7D1Q3KQU3 841 aa13.17□□□□□ -0.3
SPIN3-236ENST00000640131 SEZ6Q53EL9 994 aa13.17□□□□□ -0.3
SPIN3-236ENST00000640131 EXOC3L1Q86VI1 746 aa13.17□□□□□ -0.3
SPIN3-236ENST00000640131 MMGT1Q8N4V1 131 aa13.17□□□□□ -0.3
SPIN3-236ENST00000640131 XXYLT1Q8NBI6 393 aa13.17□□□□□ -0.3
SPIN3-236ENST00000640131 SLC35G2Q8TBE7 412 aa13.17□□□□□ -0.3
SPIN3-236ENST00000640131 SLC16A10Q8TF71 515 aa13.17□□□□□ -0.3
SPIN3-236ENST00000640131 TRIM31Q9BZY9 425 aa13.17□□□□□ -0.3
SPIN3-236ENST00000640131 TBC1D22BQ9NU19 505 aa13.17□□□□□ -0.3
SPIN3-236ENST00000640131 RABL2BQ9UNT1 228 aa13.17□□□□□ -0.3
SPIN3-236ENST00000640131 MYH9P35579 1960 aaKnown RBP13.17□□□□□ -0.3
SPIN3-236ENST00000640131 RAD51CO43502 376 aa13.16□□□□□ -0.3
SPIN3-236ENST00000640131 BCRP11274 1271 aa13.16□□□□□ -0.3
SPIN3-236ENST00000640131 NQO1P15559 274 aaKnown RBP13.16□□□□□ -0.3
SPIN3-236ENST00000640131 KCNJ2P63252 427 aa13.16□□□□□ -0.3
SPIN3-236ENST00000640131 PHEXP78562 749 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms