RNA–Protein interactions for RNA: ENST00000640091.1

NECAP1-223, Transcript of NECAP endocytosis associated 1, human

TSL 2

Gene NECAP1, Length 2,115 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAP1-223	ENST00000640091	C1orf112	Q9NSG2	853 aa		11.27	□□□□□ -0.61
NECAP1-223	ENST00000640091	PADI3	Q9ULW8	664 aa		11.27	□□□□□ -0.61
NECAP1-223	ENST00000640091		A0A087X0T9	212 aa		11.26	□□□□□ -0.61
NECAP1-223	ENST00000640091	EIF3CL	B5ME19	914 aa	Known RBP	11.26	□□□□□ -0.61
NECAP1-223	ENST00000640091	CYP26A1	O43174	497 aa		11.26	□□□□□ -0.61
NECAP1-223	ENST00000640091	OFD1	O75665	1012 aa		11.26	□□□□□ -0.61
NECAP1-223	ENST00000640091	FAM228B	P0C875	321 aa		11.26	□□□□□ -0.61
NECAP1-223	ENST00000640091	CKB	P12277	381 aa		11.26	□□□□□ -0.61
NECAP1-223	ENST00000640091	ATN1	P54259	1190 aa	Predicted RBP	11.26	□□□□□ -0.61
NECAP1-223	ENST00000640091	MAPK8IP2	Q13387	824 aa	Predicted RBP	11.26	□□□□□ -0.61
NECAP1-223	ENST00000640091	PTPN14	Q15678	1187 aa		11.26	□□□□□ -0.61
NECAP1-223	ENST00000640091	KYAT1	Q16773	422 aa		11.26	□□□□□ -0.61
NECAP1-223	ENST00000640091	FBXO47	Q5MNV8	452 aa		11.26	□□□□□ -0.61
NECAP1-223	ENST00000640091	DNAAF5	Q86Y56	855 aa		11.26	□□□□□ -0.61
NECAP1-223	ENST00000640091	C1orf127	Q8N9H9	656 aa		11.26	□□□□□ -0.61
NECAP1-223	ENST00000640091	SMG8	Q8ND04	991 aa	Known RBP	11.26	□□□□□ -0.61
NECAP1-223	ENST00000640091	EIF3C	Q99613	913 aa	Known RBP	11.26	□□□□□ -0.61
NECAP1-223	ENST00000640091	TRIM10	Q9UDY6	481 aa		11.26	□□□□□ -0.61
NECAP1-223	ENST00000640091	PARP2	Q9UGN5	583 aa		11.26	□□□□□ -0.61
NECAP1-223	ENST00000640091	OGDHL	Q9ULD0	1010 aa		11.26	□□□□□ -0.61
NECAP1-223	ENST00000640091	IPP	Q9Y573	584 aa		11.26	□□□□□ -0.61
NECAP1-223	ENST00000640091	SSU72P8	A0A1W2PR75	194 aa		11.26	□□□□□ -0.61
NECAP1-223	ENST00000640091	RCCD1	A6NED2	376 aa		11.26	□□□□□ -0.61
NECAP1-223	ENST00000640091	MEIS3P2	A8K0S8	358 aa		11.26	□□□□□ -0.61
NECAP1-223	ENST00000640091	GPR182	O15218	404 aa		11.26	□□□□□ -0.61
NECAP1-223	ENST00000640091	ZC3H11A	O75152	810 aa	Known RBP eCLIP	11.26	□□□□□ -0.61
NECAP1-223	ENST00000640091	RECQL4	O94761	1208 aa		11.26	□□□□□ -0.61
NECAP1-223	ENST00000640091	CALCA	P01258	141 aa		11.26	□□□□□ -0.61
NECAP1-223	ENST00000640091	ITGB3	P05106	788 aa		11.26	□□□□□ -0.61
NECAP1-223	ENST00000640091	TNNT1	P13805	278 aa		11.26	□□□□□ -0.61
NECAP1-223	ENST00000640091	FER	P16591	822 aa		11.26	□□□□□ -0.61
NECAP1-223	ENST00000640091	RFX1	P22670	979 aa		11.26	□□□□□ -0.61
NECAP1-223	ENST00000640091	YARS	P54577	528 aa	Known RBP	11.26	□□□□□ -0.61
NECAP1-223	ENST00000640091	NOP14	P78316	857 aa	Known RBP	11.26	□□□□□ -0.61
NECAP1-223	ENST00000640091	LPIN1	Q14693	890 aa		11.26	□□□□□ -0.61
NECAP1-223	ENST00000640091	SPA17	Q15506	151 aa		11.26	□□□□□ -0.61
NECAP1-223	ENST00000640091	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	11.26	□□□□□ -0.61
NECAP1-223	ENST00000640091	KIF12	Q96FN5	646 aa		11.26	□□□□□ -0.61
NECAP1-223	ENST00000640091	SIX4	Q9UIU6	781 aa		11.26	□□□□□ -0.61
NECAP1-223	ENST00000640091	DUSP10	Q9Y6W6	482 aa		11.26	□□□□□ -0.61
NECAP1-223	ENST00000640091	CCP110	O43303	1012 aa		11.25	□□□□□ -0.61
NECAP1-223	ENST00000640091	IPO7	O95373	1038 aa	Known RBP	11.25	□□□□□ -0.61
NECAP1-223	ENST00000640091	ASS1	P00966	412 aa	Known RBP	11.25	□□□□□ -0.61
NECAP1-223	ENST00000640091	TFRC	P02786	760 aa	Known RBP	11.25	□□□□□ -0.61
NECAP1-223	ENST00000640091	HSPA8	P11142	646 aa	Known RBP	11.25	□□□□□ -0.61
NECAP1-223	ENST00000640091	KRT5	P13647	590 aa		11.25	□□□□□ -0.61
NECAP1-223	ENST00000640091	PRKCI	P41743	596 aa		11.25	□□□□□ -0.61
NECAP1-223	ENST00000640091	CDK7	P50613	346 aa		11.25	□□□□□ -0.61
NECAP1-223	ENST00000640091	KRT83	P78385	493 aa		11.25	□□□□□ -0.61
NECAP1-223	ENST00000640091	GCNT1	Q02742	428 aa		11.25	□□□□□ -0.61
NECAP1-223	ENST00000640091	TMEM132D	Q14C87	1099 aa		11.25	□□□□□ -0.61
NECAP1-223	ENST00000640091	SGSM1	Q2NKQ1	1148 aa		11.25	□□□□□ -0.61
NECAP1-223	ENST00000640091	NYAP1	Q6ZVC0	841 aa		11.25	□□□□□ -0.61
NECAP1-223	ENST00000640091	SLC47A2	Q86VL8	602 aa		11.25	□□□□□ -0.61
NECAP1-223	ENST00000640091	FAM71A	Q8IYT1	594 aa		11.25	□□□□□ -0.61
NECAP1-223	ENST00000640091	SHC3	Q92529	594 aa		11.25	□□□□□ -0.61
NECAP1-223	ENST00000640091	ZNF592	Q92610	1267 aa		11.25	□□□□□ -0.61
NECAP1-223	ENST00000640091	IMPG2	Q9BZV3	1241 aa		11.25	□□□□□ -0.61
NECAP1-223	ENST00000640091	LACRT	Q9GZZ8	138 aa		11.25	□□□□□ -0.61
NECAP1-223	ENST00000640091	XYLT2	Q9H1B5	865 aa		11.25	□□□□□ -0.61
NECAP1-223	ENST00000640091	NXF1	Q9UBU9	619 aa	Known RBP	11.25	□□□□□ -0.61
NECAP1-223	ENST00000640091	PCDHB2	Q9Y5E7	798 aa		11.25	□□□□□ -0.61
NECAP1-223	ENST00000640091	PCDHA13	Q9Y5I0	950 aa		11.25	□□□□□ -0.61
NECAP1-223	ENST00000640091	BZW2	Q9Y6E2	419 aa	Known RBP	11.25	□□□□□ -0.61
NECAP1-223	ENST00000640091	MGEA5	O60502	916 aa		11.24	□□□□□ -0.61
NECAP1-223	ENST00000640091	SGPL1	O95470	568 aa		11.24	□□□□□ -0.61
NECAP1-223	ENST00000640091	ZSCAN20	P17040	1043 aa	Predicted RBP	11.24	□□□□□ -0.61
NECAP1-223	ENST00000640091	POU5F1	Q01860	360 aa	Known RBP	11.24	□□□□□ -0.61
NECAP1-223	ENST00000640091	PAK2	Q13177	524 aa		11.24	□□□□□ -0.61
NECAP1-223	ENST00000640091	CUL2	Q13617	745 aa		11.24	□□□□□ -0.61
NECAP1-223	ENST00000640091	SLC18A3	Q16572	532 aa		11.24	□□□□□ -0.61
NECAP1-223	ENST00000640091	WDR72	Q3MJ13	1102 aa		11.24	□□□□□ -0.61
NECAP1-223	ENST00000640091	ALKAL1	Q6UXT8	129 aa		11.24	□□□□□ -0.61
NECAP1-223	ENST00000640091	CTU1	Q7Z7A3	348 aa	Known RBP	11.24	□□□□□ -0.61
NECAP1-223	ENST00000640091	KIAA1328	Q86T90	577 aa		11.24	□□□□□ -0.61
NECAP1-223	ENST00000640091	GLYCTK	Q8IVS8	523 aa		11.24	□□□□□ -0.61
NECAP1-223	ENST00000640091	CXorf38	Q8TB03	319 aa		11.24	□□□□□ -0.61
NECAP1-223	ENST00000640091	U2AF1L4	Q8WU68	220 aa	Known RBP	11.24	□□□□□ -0.61
NECAP1-223	ENST00000640091	SLC20A1	Q8WUM9	679 aa		11.24	□□□□□ -0.61
NECAP1-223	ENST00000640091	C18orf25	Q96B23	403 aa	Predicted RBP	11.24	□□□□□ -0.61
NECAP1-223	ENST00000640091	SNX27	Q96L92	541 aa		11.24	□□□□□ -0.61
NECAP1-223	ENST00000640091	PLEKHA5	Q9HAU0	1116 aa		11.24	□□□□□ -0.61
NECAP1-223	ENST00000640091	DPP3	Q9NY33	737 aa		11.24	□□□□□ -0.61
NECAP1-223	ENST00000640091	PQBP1	O60828	265 aa	Known RBP	11.24	□□□□□ -0.61
NECAP1-223	ENST00000640091	LCA5L	O95447	670 aa		11.24	□□□□□ -0.61
NECAP1-223	ENST00000640091	RPLP2	P05387	115 aa	Known RBP	11.24	□□□□□ -0.61
NECAP1-223	ENST00000640091	WEE2	P0C1S8	567 aa		11.24	□□□□□ -0.61
NECAP1-223	ENST00000640091	POLR2B	P30876	1174 aa	Known RBP	11.24	□□□□□ -0.61
NECAP1-223	ENST00000640091	ARHGAP25	P42331	645 aa		11.24	□□□□□ -0.61
NECAP1-223	ENST00000640091	MAGEA1	P43355	309 aa		11.24	□□□□□ -0.61
NECAP1-223	ENST00000640091	MBTPS1	Q14703	1052 aa		11.24	□□□□□ -0.61
NECAP1-223	ENST00000640091	ZNF699	Q32M78	642 aa		11.24	□□□□□ -0.61
NECAP1-223	ENST00000640091	ARHGAP29	Q52LW3	1261 aa		11.24	□□□□□ -0.61
NECAP1-223	ENST00000640091	FAM26D	Q5JW98	314 aa		11.24	□□□□□ -0.61
NECAP1-223	ENST00000640091	TAF3	Q5VWG9	929 aa		11.24	□□□□□ -0.61
NECAP1-223	ENST00000640091	TRAF7	Q6Q0C0	670 aa		11.24	□□□□□ -0.61
NECAP1-223	ENST00000640091	FAM126B	Q8IXS8	530 aa		11.24	□□□□□ -0.61
NECAP1-223	ENST00000640091	LPP	Q93052	612 aa		11.24	□□□□□ -0.61
NECAP1-223	ENST00000640091	ZNF333	Q96JL9	665 aa		11.24	□□□□□ -0.61
NECAP1-223	ENST00000640091	ZFP42	Q96MM3	310 aa		11.24	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms