RNA–Protein interactions for RNA: ENST00000639943.1

PAX6-261, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-261ENST00000639943 APOBEC3GQ9HC16 384 aaKnown RBP13.13□□□□□ -0.31
PAX6-261ENST00000639943 EHD2Q9NZN4 543 aa13.13□□□□□ -0.31
PAX6-261ENST00000639943 CTTNBP2NLQ9P2B4 639 aa13.13□□□□□ -0.31
PAX6-261ENST00000639943 ANK1P16157 1881 aa13.12□□□□□ -0.31
PAX6-261ENST00000639943 ZEB2O60315 1214 aa13.12□□□□□ -0.31
PAX6-261ENST00000639943 GRIK4Q16099 956 aa13.12□□□□□ -0.31
PAX6-261ENST00000639943 ACAD10Q6JQN1 1059 aa13.12□□□□□ -0.31
PAX6-261ENST00000639943 THNSL1Q8IYQ7 743 aa13.12□□□□□ -0.31
PAX6-261ENST00000639943 POM121Q96HA1 1249 aa13.12□□□□□ -0.31
PAX6-261ENST00000639943 HES6Q96HZ4 224 aa13.12□□□□□ -0.31
PAX6-261ENST00000639943 CDT1Q9H211 546 aa13.12□□□□□ -0.31
PAX6-261ENST00000639943 FAM53CQ9NYF3 392 aa13.12□□□□□ -0.31
PAX6-261ENST00000639943 SMARCAL1Q9NZC9 954 aa13.12□□□□□ -0.31
PAX6-261ENST00000639943 A0A087WZ62 844 aa13.12□□□□□ -0.31
PAX6-261ENST00000639943 RRN3P2A6NIE6 340 aa13.12□□□□□ -0.31
PAX6-261ENST00000639943 B4GALT4O60513 344 aa13.12□□□□□ -0.31
PAX6-261ENST00000639943 MTA2O94776 668 aa13.12□□□□□ -0.31
PAX6-261ENST00000639943 IL18RAPO95256 599 aa13.12□□□□□ -0.31
PAX6-261ENST00000639943 HOXC6P09630 235 aa13.12□□□□□ -0.31
PAX6-261ENST00000639943 ACO1P21399 889 aaKnown RBP13.12□□□□□ -0.31
PAX6-261ENST00000639943 INHBEP58166 350 aa13.12□□□□□ -0.31
PAX6-261ENST00000639943 CLEC16AQ2KHT3 1053 aa13.12□□□□□ -0.31
PAX6-261ENST00000639943 GLE1Q53GS7 698 aaKnown RBP13.12□□□□□ -0.31
PAX6-261ENST00000639943 EEF1DP3Q658K8 133 aa13.12□□□□□ -0.31
PAX6-261ENST00000639943 SMYD5Q6GMV2 418 aa13.12□□□□□ -0.31
PAX6-261ENST00000639943 RGMBQ6NW40 437 aa13.12□□□□□ -0.31
PAX6-261ENST00000639943 ACTRT1Q8TDG2 376 aa13.12□□□□□ -0.31
PAX6-261ENST00000639943 FDXACB1Q9BRP7 624 aaPredicted RBP13.12□□□□□ -0.31
PAX6-261ENST00000639943 RPF1Q9H9Y2 349 aaKnown RBP13.12□□□□□ -0.31
PAX6-261ENST00000639943 COG5Q9UP83 839 aa13.12□□□□□ -0.31
PAX6-261ENST00000639943 CNTN6Q9UQ52 1028 aa13.12□□□□□ -0.31
PAX6-261ENST00000639943 PCDHB4Q9Y5E5 795 aa13.12□□□□□ -0.31
PAX6-261ENST00000639943 ASS1P00966 412 aaKnown RBP13.11□□□□□ -0.31
PAX6-261ENST00000639943 CYP1A2P05177 515 aa13.11□□□□□ -0.31
PAX6-261ENST00000639943 IQCF3P0C7M6 154 aa13.11□□□□□ -0.31
PAX6-261ENST00000639943 POU5F1Q01860 360 aaKnown RBP13.11□□□□□ -0.31
PAX6-261ENST00000639943 SGSM1Q2NKQ1 1148 aa13.11□□□□□ -0.31
PAX6-261ENST00000639943 MAP9Q49MG5 647 aa13.11□□□□□ -0.31
PAX6-261ENST00000639943 BEND6Q5SZJ8 279 aaPredicted RBP13.11□□□□□ -0.31
PAX6-261ENST00000639943 TMCO4Q5TGY1 634 aa13.11□□□□□ -0.31
PAX6-261ENST00000639943 C11orf63Q6NUN7 778 aa13.11□□□□□ -0.31
PAX6-261ENST00000639943 ANKRD36BP1Q96IX9 119 aa13.11□□□□□ -0.31
PAX6-261ENST00000639943 MTMR12Q9C0I1 747 aa13.11□□□□□ -0.31
PAX6-261ENST00000639943 GTF3C4Q9UKN8 822 aa13.11□□□□□ -0.31
PAX6-261ENST00000639943 NUB1Q9Y5A7 615 aa13.11□□□□□ -0.31
PAX6-261ENST00000639943 DYNC1LI2O43237 492 aaPredicted RBP13.11□□□□□ -0.31
PAX6-261ENST00000639943 CEP104O60308 925 aa13.11□□□□□ -0.31
PAX6-261ENST00000639943 TBC1D8O95759 1140 aa13.11□□□□□ -0.31
PAX6-261ENST00000639943 TNNC2P02585 160 aa13.11□□□□□ -0.31
PAX6-261ENST00000639943 VTNP04004 478 aa13.11□□□□□ -0.31
PAX6-261ENST00000639943 TMEM191BP0C7N4 346 aa13.11□□□□□ -0.31
PAX6-261ENST00000639943 MCF2P10911 925 aa13.11□□□□□ -0.31
PAX6-261ENST00000639943 TRPC3Q13507 836 aa13.11□□□□□ -0.31
PAX6-261ENST00000639943 AMHR2Q16671 573 aa13.11□□□□□ -0.31
PAX6-261ENST00000639943 KYAT1Q16773 422 aa13.11□□□□□ -0.31
PAX6-261ENST00000639943 C17orf99Q6UX52 265 aa13.11□□□□□ -0.31
PAX6-261ENST00000639943 USP38Q8NB14 1042 aa13.11□□□□□ -0.31
PAX6-261ENST00000639943 RBM12Q9NTZ6 932 aaKnown RBP13.11□□□□□ -0.31
PAX6-261ENST00000639943 A6NJR5 290 aa13.1□□□□□ -0.31
PAX6-261ENST00000639943 CST3P01034 146 aaPredicted RBP13.1□□□□□ -0.31
PAX6-261ENST00000639943 TFAMQ00059 246 aaKnown RBP13.1□□□□□ -0.31
PAX6-261ENST00000639943 MARCH8Q5T0T0 291 aa13.1□□□□□ -0.31
PAX6-261ENST00000639943 TRIM72Q6ZMU5 477 aa13.1□□□□□ -0.31
PAX6-261ENST00000639943 SAPCD2Q86UD0 394 aa13.1□□□□□ -0.31
PAX6-261ENST00000639943 ZNF410Q86VK4 478 aa13.1□□□□□ -0.31
PAX6-261ENST00000639943 IFNL1Q8IU54 200 aa13.1□□□□□ -0.31
PAX6-261ENST00000639943 KRT222Q8N1A0 295 aa13.1□□□□□ -0.31
PAX6-261ENST00000639943 NLRP7Q8WX94 980 aa13.1□□□□□ -0.31
PAX6-261ENST00000639943 ZNF653Q96CK0 615 aa13.1□□□□□ -0.31
PAX6-261ENST00000639943 LRRC1Q9BTT6 524 aa13.1□□□□□ -0.31
PAX6-261ENST00000639943 UVRAGQ9P2Y5 699 aa13.1□□□□□ -0.31
PAX6-261ENST00000639943 GNEQ9Y223 722 aaKnown RBP13.1□□□□□ -0.31
PAX6-261ENST00000639943 MGAMO43451 1857 aa13.1□□□□□ -0.31
PAX6-261ENST00000639943 ADCY6O43306 1168 aa13.1□□□□□ -0.31
PAX6-261ENST00000639943 OSTNP61366 133 aa13.1□□□□□ -0.31
PAX6-261ENST00000639943 PTPROQ16827 1216 aa13.1□□□□□ -0.31
PAX6-261ENST00000639943 PRAMEF19Q5SWL8 479 aa13.1□□□□□ -0.31
PAX6-261ENST00000639943 TMEM270Q6UE05 265 aa13.1□□□□□ -0.31
PAX6-261ENST00000639943 RASGEF1CQ8N431 466 aa13.1□□□□□ -0.31
PAX6-261ENST00000639943 USP6NLQ92738 828 aa13.1□□□□□ -0.31
PAX6-261ENST00000639943 TRIM11Q96F44 468 aa13.1□□□□□ -0.31
PAX6-261ENST00000639943 SCLT1Q96NL6 688 aa13.1□□□□□ -0.31
PAX6-261ENST00000639943 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.1□□□□□ -0.31
PAX6-261ENST00000639943 FUT8Q9BYC5 575 aa13.1□□□□□ -0.31
PAX6-261ENST00000639943 GPR25O00155 361 aa13.09□□□□□ -0.31
PAX6-261ENST00000639943 PGRMC1O00264 195 aaKnown RBP13.09□□□□□ -0.31
PAX6-261ENST00000639943 SLC10A3P09131 477 aa13.09□□□□□ -0.31
PAX6-261ENST00000639943 UNGP13051 313 aaPredicted RBP13.09□□□□□ -0.31
PAX6-261ENST00000639943 RGS2P41220 211 aa13.09□□□□□ -0.31
PAX6-261ENST00000639943 MYL6P60660 151 aa13.09□□□□□ -0.31
PAX6-261ENST00000639943 TNNC1P63316 161 aa13.09□□□□□ -0.31
PAX6-261ENST00000639943 CDC42EP1Q00587 391 aa13.09□□□□□ -0.31
PAX6-261ENST00000639943 OLFML2BQ68BL8 750 aa13.09□□□□□ -0.31
PAX6-261ENST00000639943 PPP1R2P3Q6NXS1 205 aa13.09□□□□□ -0.31
PAX6-261ENST00000639943 C8orf74Q6P047 294 aa13.09□□□□□ -0.31
PAX6-261ENST00000639943 HDXQ7Z353 690 aa13.09□□□□□ -0.31
PAX6-261ENST00000639943 CDR2LQ86X02 465 aaPredicted RBP13.09□□□□□ -0.31
PAX6-261ENST00000639943 EFCAB13Q8IY85 973 aa13.09□□□□□ -0.31
PAX6-261ENST00000639943 KIAA0319LQ8IZA0 1049 aa13.09□□□□□ -0.31
PAX6-261ENST00000639943 GPATCH11Q8N954 259 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms