RNA–Protein interactions for RNA: ENST00000639916.1

PAX6-259, Transcript of paired box 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAX6, Length 2,622 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-259ENST00000639916 SAMD3Q8N6K7 520 aa9.6□□□□□ -0.87
PAX6-259ENST00000639916 GLIS3Q8NEA6 775 aa9.6□□□□□ -0.87
PAX6-259ENST00000639916 TRIM11Q96F44 468 aa9.6□□□□□ -0.87
PAX6-259ENST00000639916 FAM20AQ96MK3 541 aa9.6□□□□□ -0.87
PAX6-259ENST00000639916 NOC4LQ9BVI4 516 aaKnown RBP9.6□□□□□ -0.87
PAX6-259ENST00000639916 PRKAG3Q9UGI9 489 aa9.6□□□□□ -0.87
PAX6-259ENST00000639916 KIF13BQ9NQT8 1826 aa9.6□□□□□ -0.87
PAX6-259ENST00000639916 NPHP3-ACAD11A0A0J9YXS1 232 aa9.6□□□□□ -0.87
PAX6-259ENST00000639916 POTEFA5A3E0 1075 aa9.6□□□□□ -0.87
PAX6-259ENST00000639916 TCP11X1B4DZS4 312 aa9.6□□□□□ -0.87
PAX6-259ENST00000639916 BHMG1C9JSJ3 638 aaPredicted RBP9.6□□□□□ -0.87
PAX6-259ENST00000639916 BUB1O43683 1085 aa9.6□□□□□ -0.87
PAX6-259ENST00000639916 CYP3A4P08684 503 aa9.6□□□□□ -0.87
PAX6-259ENST00000639916 POLR2MP0CAP2 368 aa9.6□□□□□ -0.87
PAX6-259ENST00000639916 POTEIP0CG38 1075 aa9.6□□□□□ -0.87
PAX6-259ENST00000639916 POTEJP0CG39 1038 aa9.6□□□□□ -0.87
PAX6-259ENST00000639916 NFKBIAP25963 317 aa9.6□□□□□ -0.87
PAX6-259ENST00000639916 IFI35P80217 286 aaPredicted RBP9.6□□□□□ -0.87
PAX6-259ENST00000639916 COASYQ13057 564 aa9.6□□□□□ -0.87
PAX6-259ENST00000639916 CCDC6Q16204 474 aa9.6□□□□□ -0.87
PAX6-259ENST00000639916 SLC2A7Q6PXP3 512 aa9.6□□□□□ -0.87
PAX6-259ENST00000639916 POTEGQ6S5H5 508 aa9.6□□□□□ -0.87
PAX6-259ENST00000639916 POTEEQ6S8J3 1075 aa9.6□□□□□ -0.87
PAX6-259ENST00000639916 MARK2Q7KZI7 788 aaKnown RBP9.6□□□□□ -0.87
PAX6-259ENST00000639916 GPBP1Q86WP2 473 aa9.6□□□□□ -0.87
PAX6-259ENST00000639916 POLR3CQ9BUI4 534 aaPredicted RBP9.6□□□□□ -0.87
PAX6-259ENST00000639916 ZNF341Q9BYN7 854 aa9.6□□□□□ -0.87
PAX6-259ENST00000639916 KIAA1522Q9P206 1035 aaPredicted RBP9.6□□□□□ -0.87
PAX6-259ENST00000639916 HESX1Q9UBX0 185 aa9.6□□□□□ -0.87
PAX6-259ENST00000639916 TMEM59LQ9UK28 342 aa9.6□□□□□ -0.87
PAX6-259ENST00000639916 FEM1BQ9UK73 627 aa9.6□□□□□ -0.87
PAX6-259ENST00000639916 MEIS1O00470 390 aa9.59□□□□□ -0.87
PAX6-259ENST00000639916 NKRFO15226 690 aaKnown RBP eCLIP9.59□□□□□ -0.87
PAX6-259ENST00000639916 SLC26A4O43511 780 aa9.59□□□□□ -0.87
PAX6-259ENST00000639916 LMNAP02545 664 aaKnown RBP9.59□□□□□ -0.87
PAX6-259ENST00000639916 KRT18P05783 430 aaKnown RBP9.59□□□□□ -0.87
PAX6-259ENST00000639916 PABPC4LP0CB38 370 aaKnown RBP9.59□□□□□ -0.87
PAX6-259ENST00000639916 SPATA31C1P0DKV0 1188 aa9.59□□□□□ -0.87
PAX6-259ENST00000639916 PSMC6P62333 389 aa9.59□□□□□ -0.87
PAX6-259ENST00000639916 GIT2Q14161 759 aa9.59□□□□□ -0.87
PAX6-259ENST00000639916 KHDC1Q4VXA5 237 aaKnown RBP9.59□□□□□ -0.87
PAX6-259ENST00000639916 ZNF280DQ6N043 979 aa9.59□□□□□ -0.87
PAX6-259ENST00000639916 FAM160B2Q86V87 743 aa9.59□□□□□ -0.87
PAX6-259ENST00000639916 USP38Q8NB14 1042 aa9.59□□□□□ -0.87
PAX6-259ENST00000639916 PGM2Q96G03 612 aa9.59□□□□□ -0.87
PAX6-259ENST00000639916 OLFM3Q96PB7 478 aa9.59□□□□□ -0.87
PAX6-259ENST00000639916 TCHPQ9BT92 498 aa9.59□□□□□ -0.87
PAX6-259ENST00000639916 METTL5Q9NRN9 209 aaKnown RBP9.59□□□□□ -0.87
PAX6-259ENST00000639916 BCS1LQ9Y276 419 aa9.59□□□□□ -0.87
PAX6-259ENST00000639916 TDRKHQ9Y2W6 561 aaKnown RBP9.59□□□□□ -0.87
PAX6-259ENST00000639916 MRPL11Q9Y3B7 192 aaKnown RBP9.59□□□□□ -0.87
PAX6-259ENST00000639916 BIRC5O15392 142 aa9.59□□□□□ -0.87
PAX6-259ENST00000639916 PLA2G6O60733 806 aa9.59□□□□□ -0.87
PAX6-259ENST00000639916 RPA1P27694 616 aa9.59□□□□□ -0.87
PAX6-259ENST00000639916 EPHB2P29323 1055 aa9.59□□□□□ -0.87
PAX6-259ENST00000639916 HALP42357 657 aa9.59□□□□□ -0.87
PAX6-259ENST00000639916 KIF11P52732 1056 aa9.59□□□□□ -0.87
PAX6-259ENST00000639916 EMP3P54852 163 aa9.59□□□□□ -0.87
PAX6-259ENST00000639916 UBXN2AP68543 259 aa9.59□□□□□ -0.87
PAX6-259ENST00000639916 LRRC63Q05C16 580 aa9.59□□□□□ -0.87
PAX6-259ENST00000639916 TNFAIP1Q13829 316 aa9.59□□□□□ -0.87
PAX6-259ENST00000639916 CNGA2Q16280 664 aa9.59□□□□□ -0.87
PAX6-259ENST00000639916 WDR72Q3MJ13 1102 aa9.59□□□□□ -0.87
PAX6-259ENST00000639916 TMEM259Q4ZIN3 620 aa9.59□□□□□ -0.87
PAX6-259ENST00000639916 HERC4Q5GLZ8 1057 aaPredicted RBP9.59□□□□□ -0.87
PAX6-259ENST00000639916 MIIPQ5JXC2 388 aa9.59□□□□□ -0.87
PAX6-259ENST00000639916 FAM26FQ5R3K3 315 aa9.59□□□□□ -0.87
PAX6-259ENST00000639916 LDHDQ86WU2 507 aa9.59□□□□□ -0.87
PAX6-259ENST00000639916 CCDC125Q86Z20 511 aa9.59□□□□□ -0.87
PAX6-259ENST00000639916 KBTBD2Q8IY47 623 aa9.59□□□□□ -0.87
PAX6-259ENST00000639916 EXOC8Q8IYI6 725 aa9.59□□□□□ -0.87
PAX6-259ENST00000639916 NMD3Q96D46 503 aaKnown RBP9.59□□□□□ -0.87
PAX6-259ENST00000639916 DYDC2Q96IM9 177 aa9.59□□□□□ -0.87
PAX6-259ENST00000639916 NOX5Q96PH1 765 aa9.59□□□□□ -0.87
PAX6-259ENST00000639916 TBC1D10AQ9BXI6 508 aa9.59□□□□□ -0.87
PAX6-259ENST00000639916 ARHGAP20Q9P2F6 1191 aa9.59□□□□□ -0.87
PAX6-259ENST00000639916 DNM3Q9UQ16 869 aa9.59□□□□□ -0.87
PAX6-259ENST00000639916 ZNF148Q9UQR1 794 aa9.59□□□□□ -0.87
PAX6-259ENST00000639916 IGLV3-22A0A075B6J6 115 aa9.58□□□□□ -0.88
PAX6-259ENST00000639916 SMIM23A6NLE4 172 aa9.58□□□□□ -0.88
PAX6-259ENST00000639916 DAPK3O43293 454 aa9.58□□□□□ -0.88
PAX6-259ENST00000639916 GSTT2P0CG29 244 aa9.58□□□□□ -0.88
PAX6-259ENST00000639916 GSTT2BP0CG30 244 aa9.58□□□□□ -0.88
PAX6-259ENST00000639916 TARSP26639 723 aaKnown RBP9.58□□□□□ -0.88
PAX6-259ENST00000639916 HOXA7P31268 230 aaPredicted RBP9.58□□□□□ -0.88
PAX6-259ENST00000639916 SLC12A3P55017 1021 aa9.58□□□□□ -0.88
PAX6-259ENST00000639916 ZNF280AP59817 542 aaPredicted RBP9.58□□□□□ -0.88
PAX6-259ENST00000639916 CYP4A11Q02928 519 aa9.58□□□□□ -0.88
PAX6-259ENST00000639916 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.58□□□□□ -0.88
PAX6-259ENST00000639916 ARSHQ5FYA8 562 aa9.58□□□□□ -0.88
PAX6-259ENST00000639916 LRRC74BQ6ZQY2 392 aa9.58□□□□□ -0.88
PAX6-259ENST00000639916 SAMD7Q7Z3H4 446 aa9.58□□□□□ -0.88
PAX6-259ENST00000639916 FAM133AQ8N9E0 248 aa9.58□□□□□ -0.88
PAX6-259ENST00000639916 RBM46Q8TBY0 533 aaKnown RBP9.58□□□□□ -0.88
PAX6-259ENST00000639916 DQX1Q8TE96 717 aaKnown RBP9.58□□□□□ -0.88
PAX6-259ENST00000639916 DIS3LQ8TF46 1054 aaKnown RBP9.58□□□□□ -0.88
PAX6-259ENST00000639916 PCMTD1Q96MG8 357 aaPredicted RBP9.58□□□□□ -0.88
PAX6-259ENST00000639916 TEPSINQ96N21 525 aa9.58□□□□□ -0.88
PAX6-259ENST00000639916 TSG101Q99816 390 aa9.58□□□□□ -0.88
PAX6-259ENST00000639916 ASCC2Q9H1I8 757 aaPredicted RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms