RNA–Protein interactions for RNA: ENST00000638488.1

GFAP-228, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 2,641 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-228ENST00000638488 ECM1Q16610 540 aa12.89□□□□□ -0.35
GFAP-228ENST00000638488 ZCWPW2Q504Y3 356 aa12.89□□□□□ -0.35
GFAP-228ENST00000638488 SLC45A4Q5BKX6 768 aa12.89□□□□□ -0.35
GFAP-228ENST00000638488 RBM26Q5T8P6 1007 aaKnown RBP12.89□□□□□ -0.35
GFAP-228ENST00000638488 ZNF449Q6P9G9 518 aa12.89□□□□□ -0.35
GFAP-228ENST00000638488 FAM133AQ8N9E0 248 aa12.89□□□□□ -0.35
GFAP-228ENST00000638488 TSG101Q99816 390 aa12.89□□□□□ -0.35
GFAP-228ENST00000638488 NAGPAQ9UK23 515 aa12.89□□□□□ -0.35
GFAP-228ENST00000638488 A8MXQ7 604 aa12.88□□□□□ -0.35
GFAP-228ENST00000638488 CCDC22O60826 627 aa12.88□□□□□ -0.35
GFAP-228ENST00000638488 TCEA3O75764 348 aa12.88□□□□□ -0.35
GFAP-228ENST00000638488 GFPT2O94808 682 aa12.88□□□□□ -0.35
GFAP-228ENST00000638488 ZWINTO95229 277 aa12.88□□□□□ -0.35
GFAP-228ENST00000638488 GH1P01241 217 aa12.88□□□□□ -0.35
GFAP-228ENST00000638488 CHRNA3P32297 505 aa12.88□□□□□ -0.35
GFAP-228ENST00000638488 PTGIRP43119 386 aa12.88□□□□□ -0.35
GFAP-228ENST00000638488 FXR2P51116 673 aaKnown RBP eCLIP12.88□□□□□ -0.35
GFAP-228ENST00000638488 PLOD1Q02809 727 aaPredicted RBP12.88□□□□□ -0.35
GFAP-228ENST00000638488 MPP2Q14168 576 aa12.88□□□□□ -0.35
GFAP-228ENST00000638488 RRP1BQ14684 758 aaKnown RBP12.88□□□□□ -0.35
GFAP-228ENST00000638488 P3H1Q32P28 736 aa12.88□□□□□ -0.35
GFAP-228ENST00000638488 PPP1R18Q6NYC8 613 aa12.88□□□□□ -0.35
GFAP-228ENST00000638488 RFWD3Q6PCD5 774 aa12.88□□□□□ -0.35
GFAP-228ENST00000638488 TMEM179Q6ZVK1 233 aa12.88□□□□□ -0.35
GFAP-228ENST00000638488 ARMCX6Q7L4S7 300 aa12.88□□□□□ -0.35
GFAP-228ENST00000638488 OTUD6AQ7L8S5 288 aa12.88□□□□□ -0.35
GFAP-228ENST00000638488 KBTBD2Q8IY47 623 aa12.88□□□□□ -0.35
GFAP-228ENST00000638488 UHMK1Q8TAS1 419 aaKnown RBP12.88□□□□□ -0.35
GFAP-228ENST00000638488 CTNNBL1Q8WYA6 563 aaPredicted RBP12.88□□□□□ -0.35
GFAP-228ENST00000638488 GFM2Q969S9 779 aaKnown RBP12.88□□□□□ -0.35
GFAP-228ENST00000638488 PRDM16Q9HAZ2 1276 aa12.88□□□□□ -0.35
GFAP-228ENST00000638488 ZNF277Q9NRM2 450 aaPredicted RBP12.88□□□□□ -0.35
GFAP-228ENST00000638488 NYAP2Q9P242 653 aa12.88□□□□□ -0.35
GFAP-228ENST00000638488 PCDHA12Q9UN75 941 aa12.88□□□□□ -0.35
GFAP-228ENST00000638488 SCAF8Q9UPN6 1271 aaKnown RBP12.88□□□□□ -0.35
GFAP-228ENST00000638488 NR2E1Q9Y466 385 aa12.88□□□□□ -0.35
GFAP-228ENST00000638488 PVALEFA0A1B0GWK0 134 aa12.88□□□□□ -0.35
GFAP-228ENST00000638488 PHF2O75151 1096 aa12.88□□□□□ -0.35
GFAP-228ENST00000638488 CBX6O95503 412 aa12.88□□□□□ -0.35
GFAP-228ENST00000638488 NDUFB10O96000 172 aa12.88□□□□□ -0.35
GFAP-228ENST00000638488 ETS2P15036 469 aa12.88□□□□□ -0.35
GFAP-228ENST00000638488 CREB1P16220 341 aa12.88□□□□□ -0.35
GFAP-228ENST00000638488 SERPINB3P29508 390 aa12.88□□□□□ -0.35
GFAP-228ENST00000638488 RPL21P46778 160 aaKnown RBP12.88□□□□□ -0.35
GFAP-228ENST00000638488 DSG1Q02413 1049 aa12.88□□□□□ -0.35
GFAP-228ENST00000638488 CACNB1Q02641 598 aaPredicted RBP12.88□□□□□ -0.35
GFAP-228ENST00000638488 PTK2Q05397 1052 aa12.88□□□□□ -0.35
GFAP-228ENST00000638488 ZYXQ15942 572 aaKnown RBP12.88□□□□□ -0.35
GFAP-228ENST00000638488 UBAP2Q5T6F2 1119 aaKnown RBP12.88□□□□□ -0.35
GFAP-228ENST00000638488 TATDN1Q6P1N9 297 aa12.88□□□□□ -0.35
GFAP-228ENST00000638488 ALKBH5Q6P6C2 394 aaKnown RBP12.88□□□□□ -0.35
GFAP-228ENST00000638488 DSTYKQ6XUX3 929 aa12.88□□□□□ -0.35
GFAP-228ENST00000638488 ALDH16A1Q8IZ83 802 aa12.88□□□□□ -0.35
GFAP-228ENST00000638488 C7orf43Q8WVR3 580 aa12.88□□□□□ -0.35
GFAP-228ENST00000638488 HAS1Q92839 578 aa12.88□□□□□ -0.35
GFAP-228ENST00000638488 GLG1Q92896 1179 aa12.88□□□□□ -0.35
GFAP-228ENST00000638488 AGBL1Q96MI9 1066 aa12.88□□□□□ -0.35
GFAP-228ENST00000638488 MIPEPQ99797 713 aa12.88□□□□□ -0.35
GFAP-228ENST00000638488 CORO1BQ9BR76 489 aa12.88□□□□□ -0.35
GFAP-228ENST00000638488 CADM1Q9BY67 442 aaKnown RBP12.88□□□□□ -0.35
GFAP-228ENST00000638488 OXCT2Q9BYC2 517 aaPredicted RBP12.88□□□□□ -0.35
GFAP-228ENST00000638488 BRD8Q9H0E9 1235 aa12.88□□□□□ -0.35
GFAP-228ENST00000638488 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.88□□□□□ -0.35
GFAP-228ENST00000638488 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.88□□□□□ -0.35
GFAP-228ENST00000638488 PCYOX1Q9UHG3 505 aa12.88□□□□□ -0.35
GFAP-228ENST00000638488 LGALS13Q9UHV8 139 aa12.88□□□□□ -0.35
GFAP-228ENST00000638488 ZNF148Q9UQR1 794 aa12.88□□□□□ -0.35
GFAP-228ENST00000638488 COL4A3BPQ9Y5P4 624 aa12.88□□□□□ -0.35
GFAP-228ENST00000638488 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.87□□□□□ -0.35
GFAP-228ENST00000638488 DDX3YO15523 660 aaKnown RBP12.87□□□□□ -0.35
GFAP-228ENST00000638488 FOXN2P32314 431 aa12.87□□□□□ -0.35
GFAP-228ENST00000638488 ECE1P42892 770 aa12.87□□□□□ -0.35
GFAP-228ENST00000638488 TTLL12Q14166 644 aaPredicted RBP12.87□□□□□ -0.35
GFAP-228ENST00000638488 LRRC41Q15345 812 aa12.87□□□□□ -0.35
GFAP-228ENST00000638488 LONRF1Q17RB8 773 aa12.87□□□□□ -0.35
GFAP-228ENST00000638488 CC2D2BQ6DHV5 1058 aa12.87□□□□□ -0.35
GFAP-228ENST00000638488 CYFIP1Q7L576 1253 aa12.87□□□□□ -0.35
GFAP-228ENST00000638488 LARGE2Q8N3Y3 721 aa12.87□□□□□ -0.35
GFAP-228ENST00000638488 ZNF398Q8TD17 642 aa12.87□□□□□ -0.35
GFAP-228ENST00000638488 DIS3LQ8TF46 1054 aaKnown RBP12.87□□□□□ -0.35
GFAP-228ENST00000638488 DCAF4Q8WV16 495 aa12.87□□□□□ -0.35
GFAP-228ENST00000638488 DDX12PQ92771 950 aa12.87□□□□□ -0.35
GFAP-228ENST00000638488 ART4Q93070 314 aa12.87□□□□□ -0.35
GFAP-228ENST00000638488 MPP4Q96JB8 637 aa12.87□□□□□ -0.35
GFAP-228ENST00000638488 DDX50Q9BQ39 737 aaKnown RBP12.87□□□□□ -0.35
GFAP-228ENST00000638488 ANO3Q9BYT9 981 aa12.87□□□□□ -0.35
GFAP-228ENST00000638488 GANQ9H2C0 597 aa12.87□□□□□ -0.35
GFAP-228ENST00000638488 UNC45AQ9H3U1 944 aa12.87□□□□□ -0.35
GFAP-228ENST00000638488 MLXIPLQ9NP71 852 aa12.87□□□□□ -0.35
GFAP-228ENST00000638488 TIMMDC1Q9NPL8 285 aa12.87□□□□□ -0.35
GFAP-228ENST00000638488 SIPA1L1O43166 1804 aa12.87□□□□□ -0.35
GFAP-228ENST00000638488 STRNO43815 780 aa12.87□□□□□ -0.35
GFAP-228ENST00000638488 H2AFZP0C0S5 128 aa12.87□□□□□ -0.35
GFAP-228ENST00000638488 HOXA13P31271 388 aaPredicted RBP12.87□□□□□ -0.35
GFAP-228ENST00000638488 STAT3P40763 770 aa12.87□□□□□ -0.35
GFAP-228ENST00000638488 ADARP55265 1226 aaKnown RBP12.87□□□□□ -0.35
GFAP-228ENST00000638488 OXCT1P55809 520 aa12.87□□□□□ -0.35
GFAP-228ENST00000638488 ARID5AQ03989 594 aa12.87□□□□□ -0.35
GFAP-228ENST00000638488 ORC2Q13416 577 aaPredicted RBP12.87□□□□□ -0.35
GFAP-228ENST00000638488 ACAD11Q709F0 780 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms