RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 GET4Q7L5D6 327 aaPredicted RBP20.66■□□□□ 0.9
CLN6-221ENST00000637494 HSCBQ8IWL3 235 aa20.66■□□□□ 0.9
CLN6-221ENST00000637494 C3orf58Q8NDZ4 430 aa20.66■□□□□ 0.9
CLN6-221ENST00000637494 APPL2Q8NEU8 664 aa20.66■□□□□ 0.9
CLN6-221ENST00000637494 NXPE3Q969Y0 559 aa20.66■□□□□ 0.9
CLN6-221ENST00000637494 C18orf25Q96B23 403 aaPredicted RBP20.66■□□□□ 0.9
CLN6-221ENST00000637494 KIF12Q96FN5 646 aa20.66■□□□□ 0.9
CLN6-221ENST00000637494 TSPAN18Q96SJ8 248 aa20.66■□□□□ 0.9
CLN6-221ENST00000637494 MSTO1Q9BUK6 570 aa20.66■□□□□ 0.9
CLN6-221ENST00000637494 KCNK12Q9HB15 430 aa20.66■□□□□ 0.9
CLN6-221ENST00000637494 POLIQ9UNA4 740 aa20.66■□□□□ 0.9
CLN6-221ENST00000637494 MTMR6Q9Y217 621 aa20.66■□□□□ 0.9
CLN6-221ENST00000637494 CITO14578 2027 aa20.65■□□□□ 0.9
CLN6-221ENST00000637494 OGTO15294 1046 aa20.65■□□□□ 0.9
CLN6-221ENST00000637494 PDIA4P13667 645 aaKnown RBP20.65■□□□□ 0.9
CLN6-221ENST00000637494 FSHRP23945 695 aa20.65■□□□□ 0.9
CLN6-221ENST00000637494 ELF1P32519 619 aa20.65■□□□□ 0.9
CLN6-221ENST00000637494 SLC39A14Q15043 492 aa20.65■□□□□ 0.9
CLN6-221ENST00000637494 DYMQ7RTS9 669 aa20.65■□□□□ 0.9
CLN6-221ENST00000637494 SLC7A14Q8TBB6 771 aa20.65■□□□□ 0.9
CLN6-221ENST00000637494 LRRC15Q8TF66 581 aa20.65■□□□□ 0.9
CLN6-221ENST00000637494 ZNF396Q96N95 335 aaPredicted RBP20.65■□□□□ 0.9
CLN6-221ENST00000637494 EPS15L1Q9UBC2 864 aa20.65■□□□□ 0.9
CLN6-221ENST00000637494 UBQLN1Q9UMX0 589 aaKnown RBP20.65■□□□□ 0.9
CLN6-221ENST00000637494 ZFP37Q9Y6Q3 630 aaPredicted RBP20.65■□□□□ 0.9
CLN6-221ENST00000637494 TECTAO75443 2155 aa20.65■□□□□ 0.9
CLN6-221ENST00000637494 TRIP11Q15643 1979 aa20.65■□□□□ 0.9
CLN6-221ENST00000637494 ADAM12O43184 909 aa20.64■□□□□ 0.89
CLN6-221ENST00000637494 NMT1P30419 496 aaKnown RBP20.64■□□□□ 0.89
CLN6-221ENST00000637494 GTF2BQ00403 316 aa20.64■□□□□ 0.89
CLN6-221ENST00000637494 STK38Q15208 465 aa20.64■□□□□ 0.89
CLN6-221ENST00000637494 VARS2Q5ST30 1063 aaKnown RBP20.64■□□□□ 0.89
CLN6-221ENST00000637494 SLFN12LQ6IEE8 588 aa20.64■□□□□ 0.89
CLN6-221ENST00000637494 CD300LGQ6UXG3 332 aa20.64■□□□□ 0.89
CLN6-221ENST00000637494 USP49Q70CQ1 688 aa20.64■□□□□ 0.89
CLN6-221ENST00000637494 GRASPQ7Z6J2 395 aaPredicted RBP20.64■□□□□ 0.89
CLN6-221ENST00000637494 MAP4K3Q8IVH8 894 aa20.64■□□□□ 0.89
CLN6-221ENST00000637494 CD302Q8IX05 232 aa20.64■□□□□ 0.89
CLN6-221ENST00000637494 SNX21Q969T3 373 aa20.64■□□□□ 0.89
CLN6-221ENST00000637494 CLIC6Q96NY7 704 aa20.64■□□□□ 0.89
CLN6-221ENST00000637494 USP28Q96RU2 1077 aa20.64■□□□□ 0.89
CLN6-221ENST00000637494 SEL1LQ9UBV2 794 aa20.64■□□□□ 0.89
CLN6-221ENST00000637494 FBXL21Q9UKT6 434 aa20.64■□□□□ 0.89
CLN6-221ENST00000637494 MORC2Q9Y6X9 1032 aaPredicted RBP20.64■□□□□ 0.89
CLN6-221ENST00000637494 TTC26A0AVF1 554 aa20.63■□□□□ 0.89
CLN6-221ENST00000637494 CCL16O15467 120 aa20.63■□□□□ 0.89
CLN6-221ENST00000637494 GAP43P17677 238 aa20.63■□□□□ 0.89
CLN6-221ENST00000637494 CYP3A5P20815 502 aa20.63■□□□□ 0.89
CLN6-221ENST00000637494 STAT6P42226 847 aa20.63■□□□□ 0.89
CLN6-221ENST00000637494 ZNF280DQ6N043 979 aa20.63■□□□□ 0.89
CLN6-221ENST00000637494 DDX12PQ92771 950 aa20.63■□□□□ 0.89
CLN6-221ENST00000637494 HVCN1Q96D96 273 aa20.63■□□□□ 0.89
CLN6-221ENST00000637494 FAM212AQ96EL1 285 aa20.63■□□□□ 0.89
CLN6-221ENST00000637494 SUSD3Q96L08 255 aa20.63■□□□□ 0.89
CLN6-221ENST00000637494 ST6GALNAC4Q9H4F1 302 aa20.63■□□□□ 0.89
CLN6-221ENST00000637494 A0A0B4J269 797 aa20.62■□□□□ 0.89
CLN6-221ENST00000637494 PRRG1O14668 218 aa20.62■□□□□ 0.89
CLN6-221ENST00000637494 N4BP1O75113 896 aaKnown RBP20.62■□□□□ 0.89
CLN6-221ENST00000637494 LRG1P02750 347 aa20.62■□□□□ 0.89
CLN6-221ENST00000637494 POU2F2P09086 479 aa20.62■□□□□ 0.89
CLN6-221ENST00000637494 LAMP2P13473 410 aa20.62■□□□□ 0.89
CLN6-221ENST00000637494 IGFBP6P24592 240 aaPredicted RBP20.62■□□□□ 0.89
CLN6-221ENST00000637494 AVPR2P30518 371 aa20.62■□□□□ 0.89
CLN6-221ENST00000637494 TNFSF9P41273 254 aa20.62■□□□□ 0.89
CLN6-221ENST00000637494 PTPN5P54829 565 aa20.62■□□□□ 0.89
CLN6-221ENST00000637494 ARPP19P56211 112 aa20.62■□□□□ 0.89
CLN6-221ENST00000637494 CTXN3Q4LDR2 81 aa20.62■□□□□ 0.89
CLN6-221ENST00000637494 SLC8B1Q6J4K2 584 aa20.62■□□□□ 0.89
CLN6-221ENST00000637494 BEST2Q8NFU1 509 aa20.62■□□□□ 0.89
CLN6-221ENST00000637494 ZNF461Q8TAF7 563 aa20.62■□□□□ 0.89
CLN6-221ENST00000637494 MYADMQ96S97 322 aa20.62■□□□□ 0.89
CLN6-221ENST00000637494 HAPLN2Q9GZV7 340 aa20.62■□□□□ 0.89
CLN6-221ENST00000637494 MRPL44Q9H9J2 332 aaKnown RBP20.62■□□□□ 0.89
CLN6-221ENST00000637494 TUBGCP4Q9UGJ1 667 aa20.62■□□□□ 0.89
CLN6-221ENST00000637494 DUSP12Q9UNI6 340 aa20.62■□□□□ 0.89
CLN6-221ENST00000637494 EXOC7Q9UPT5 735 aa20.62■□□□□ 0.89
CLN6-221ENST00000637494 VWA8A3KMH1 1905 aa20.61■□□□□ 0.89
CLN6-221ENST00000637494 LACTBL1A8MY62 500 aa20.61■□□□□ 0.89
CLN6-221ENST00000637494 LRPAP1P30533 357 aa20.61■□□□□ 0.89
CLN6-221ENST00000637494 NUBP1P53384 320 aa20.61■□□□□ 0.89
CLN6-221ENST00000637494 SPAG1Q07617 926 aa20.61■□□□□ 0.89
CLN6-221ENST00000637494 ZC2HC1CQ53FD0 456 aaPredicted RBP20.61■□□□□ 0.89
CLN6-221ENST00000637494 ADALQ6DHV7 355 aa20.61■□□□□ 0.89
CLN6-221ENST00000637494 RSPO2Q6UXX9 243 aaPredicted RBP20.61■□□□□ 0.89
CLN6-221ENST00000637494 SFR1Q86XK3 245 aa20.61■□□□□ 0.89
CLN6-221ENST00000637494 OXCT2Q9BYC2 517 aaPredicted RBP20.61■□□□□ 0.89
CLN6-221ENST00000637494 LRRC27Q9C0I9 530 aa20.61■□□□□ 0.89
CLN6-221ENST00000637494 IRF2BPLQ9H1B7 796 aa20.61■□□□□ 0.89
CLN6-221ENST00000637494 SMOC2Q9H3U7 446 aa20.61■□□□□ 0.89
CLN6-221ENST00000637494 PCDHB8Q9UN66 801 aa20.61■□□□□ 0.89
CLN6-221ENST00000637494 MEFVO15553 781 aaPredicted RBP20.6■□□□□ 0.89
CLN6-221ENST00000637494 IDEP14735 1019 aa20.6■□□□□ 0.89
CLN6-221ENST00000637494 PAX3P23760 479 aa20.6■□□□□ 0.89
CLN6-221ENST00000637494 NASPP49321 788 aaPredicted RBP20.6■□□□□ 0.89
CLN6-221ENST00000637494 ROR1Q01973 937 aa20.6■□□□□ 0.89
CLN6-221ENST00000637494 POSTNQ15063 836 aa20.6■□□□□ 0.89
CLN6-221ENST00000637494 ENOX2Q16206 610 aaKnown RBP20.6■□□□□ 0.89
CLN6-221ENST00000637494 TPGS2Q68CL5 300 aa20.6■□□□□ 0.89
CLN6-221ENST00000637494 DSTYKQ6XUX3 929 aa20.6■□□□□ 0.89
CLN6-221ENST00000637494 ZNF720Q7Z2F6 126 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms