RNA–Protein interactions for RNA: ENST00000637387.1

CTSD-211, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-211ENST00000637387 TRIM43BA6NCK2 446 aa16.49■□□□□ 0.23
CTSD-211ENST00000637387 TULP1O00294 542 aaPredicted RBP16.49■□□□□ 0.23
CTSD-211ENST00000637387 ZNF263O14978 683 aa16.49■□□□□ 0.23
CTSD-211ENST00000637387 ZC3H11AO75152 810 aaKnown RBP eCLIP16.49■□□□□ 0.23
CTSD-211ENST00000637387 CAND2O75155 1236 aa16.49■□□□□ 0.23
CTSD-211ENST00000637387 RPS6KA5O75582 802 aa16.49■□□□□ 0.23
CTSD-211ENST00000637387 NDUFA10O95299 355 aa16.49■□□□□ 0.23
CTSD-211ENST00000637387 PRKCIP41743 596 aa16.49■□□□□ 0.23
CTSD-211ENST00000637387 AP3M2P53677 418 aa16.49■□□□□ 0.23
CTSD-211ENST00000637387 MAPK8IP2Q13387 824 aaPredicted RBP16.49■□□□□ 0.23
CTSD-211ENST00000637387 BIRC3Q13489 604 aa16.49■□□□□ 0.23
CTSD-211ENST00000637387 ZNF618Q5T7W0 954 aa16.49■□□□□ 0.23
CTSD-211ENST00000637387 JADE1Q6IE81 842 aa16.49■□□□□ 0.23
CTSD-211ENST00000637387 GPR153Q6NV75 609 aa16.49■□□□□ 0.23
CTSD-211ENST00000637387 TRAPPC11Q7Z392 1133 aa16.49■□□□□ 0.23
CTSD-211ENST00000637387 REXO1L1PQ8IX06 675 aa16.49■□□□□ 0.23
CTSD-211ENST00000637387 FAM126BQ8IXS8 530 aa16.49■□□□□ 0.23
CTSD-211ENST00000637387 SMG8Q8ND04 991 aaKnown RBP16.49■□□□□ 0.23
CTSD-211ENST00000637387 ATRIPQ8WXE1 791 aa16.49■□□□□ 0.23
CTSD-211ENST00000637387 TATDN2Q93075 761 aa16.49■□□□□ 0.23
CTSD-211ENST00000637387 TRIM43Q96BQ3 446 aaPredicted RBP16.49■□□□□ 0.23
CTSD-211ENST00000637387 PPP1R13BQ96KQ4 1090 aa16.49■□□□□ 0.23
CTSD-211ENST00000637387 LBHD1Q9BQE6 289 aaPredicted RBP16.49■□□□□ 0.23
CTSD-211ENST00000637387 UBE2TQ9NPD8 197 aaPredicted RBP16.49■□□□□ 0.23
CTSD-211ENST00000637387 PRKAG2Q9UGJ0 569 aa16.49■□□□□ 0.23
CTSD-211ENST00000637387 ST3GAL5Q9UNP4 418 aa16.49■□□□□ 0.23
CTSD-211ENST00000637387 PPP2R2CQ9Y2T4 447 aa16.49■□□□□ 0.23
CTSD-211ENST00000637387 UMODL1Q5DID0 1318 aa16.48■□□□□ 0.23
CTSD-211ENST00000637387 SSU72P8A0A1W2PR75 194 aa16.48■□□□□ 0.23
CTSD-211ENST00000637387 CST3P01034 146 aaPredicted RBP16.48■□□□□ 0.23
CTSD-211ENST00000637387 SERPING1P05155 500 aa16.48■□□□□ 0.23
CTSD-211ENST00000637387 CKBP12277 381 aa16.48■□□□□ 0.23
CTSD-211ENST00000637387 SOX5P35711 763 aa16.48■□□□□ 0.23
CTSD-211ENST00000637387 NCBP1Q09161 790 aaKnown RBP16.48■□□□□ 0.23
CTSD-211ENST00000637387 LPIN1Q14693 890 aa16.48■□□□□ 0.23
CTSD-211ENST00000637387 MBTPS1Q14703 1052 aa16.48■□□□□ 0.23
CTSD-211ENST00000637387 ASIC2Q16515 512 aa16.48■□□□□ 0.23
CTSD-211ENST00000637387 TSR1Q2NL82 804 aaKnown RBP16.48■□□□□ 0.23
CTSD-211ENST00000637387 SPOPLQ6IQ16 392 aa16.48■□□□□ 0.23
CTSD-211ENST00000637387 ANKRD33Q7Z3H0 272 aa16.48■□□□□ 0.23
CTSD-211ENST00000637387 SHC3Q92529 594 aa16.48■□□□□ 0.23
CTSD-211ENST00000637387 TOX2Q96NM4 488 aa16.48■□□□□ 0.23
CTSD-211ENST00000637387 NT5C1BQ96P26 610 aa16.48■□□□□ 0.23
CTSD-211ENST00000637387 ACAP3Q96P50 834 aa16.48■□□□□ 0.23
CTSD-211ENST00000637387 SYT11Q9BT88 431 aa16.48■□□□□ 0.23
CTSD-211ENST00000637387 ZNHIT6Q9NWK9 470 aaKnown RBP16.48■□□□□ 0.23
CTSD-211ENST00000637387 TRMT1Q9NXH9 659 aaKnown RBP16.48■□□□□ 0.23
CTSD-211ENST00000637387 SIX4Q9UIU6 781 aa16.48■□□□□ 0.23
CTSD-211ENST00000637387 NOD1Q9Y239 953 aa16.48■□□□□ 0.23
CTSD-211ENST00000637387 EPN1Q9Y6I3 576 aaPredicted RBP16.48■□□□□ 0.23
CTSD-211ENST00000637387 RECQL4O94761 1208 aa16.47■□□□□ 0.23
CTSD-211ENST00000637387 ASS1P00966 412 aaKnown RBP16.47■□□□□ 0.23
CTSD-211ENST00000637387 CD4P01730 458 aa16.47■□□□□ 0.23
CTSD-211ENST00000637387 TMEM191BP0C7N4 346 aa16.47■□□□□ 0.23
CTSD-211ENST00000637387 GHRP10912 638 aa16.47■□□□□ 0.23
CTSD-211ENST00000637387 EIF4A3P38919 411 aaKnown RBP16.47■□□□□ 0.23
CTSD-211ENST00000637387 TFAMQ00059 246 aaKnown RBP16.47■□□□□ 0.23
CTSD-211ENST00000637387 GCNT1Q02742 428 aa16.47■□□□□ 0.23
CTSD-211ENST00000637387 NCOA4Q13772 614 aa16.47■□□□□ 0.23
CTSD-211ENST00000637387 ARHGAP44Q17R89 818 aa16.47■□□□□ 0.23
CTSD-211ENST00000637387 ALKAL1Q6UXT8 129 aa16.47■□□□□ 0.23
CTSD-211ENST00000637387 PPM1KQ8N3J5 372 aa16.47■□□□□ 0.23
CTSD-211ENST00000637387 C1orf127Q8N9H9 656 aa16.47■□□□□ 0.23
CTSD-211ENST00000637387 ZMAT2Q96NC0 199 aaKnown RBP16.47■□□□□ 0.23
CTSD-211ENST00000637387 ARID3AQ99856 593 aa16.47■□□□□ 0.23
CTSD-211ENST00000637387 CCDC94Q9BW85 323 aaPredicted RBP16.47■□□□□ 0.23
CTSD-211ENST00000637387 XYLT2Q9H1B5 865 aa16.47■□□□□ 0.23
CTSD-211ENST00000637387 C2CD2Q9Y426 696 aa16.47■□□□□ 0.23
CTSD-211ENST00000637387 IPPQ9Y573 584 aa16.47■□□□□ 0.23
CTSD-211ENST00000637387 TET1Q8NFU7 2136 aa16.47■□□□□ 0.23
CTSD-211ENST00000637387 FOXN3O00409 490 aaPredicted RBP16.47■□□□□ 0.23
CTSD-211ENST00000637387 KIAA0355O15063 1070 aa16.47■□□□□ 0.23
CTSD-211ENST00000637387 MGEA5O60502 916 aa16.47■□□□□ 0.23
CTSD-211ENST00000637387 GFPT2O94808 682 aa16.47■□□□□ 0.23
CTSD-211ENST00000637387 LCA5LO95447 670 aa16.47■□□□□ 0.23
CTSD-211ENST00000637387 ITGB8P26012 769 aa16.47■□□□□ 0.23
CTSD-211ENST00000637387 CD52P31358 61 aa16.47■□□□□ 0.23
CTSD-211ENST00000637387 STAT1P42224 750 aa16.47■□□□□ 0.23
CTSD-211ENST00000637387 KIF11P52732 1056 aa16.47■□□□□ 0.23
CTSD-211ENST00000637387 NOP14P78316 857 aaKnown RBP16.47■□□□□ 0.23
CTSD-211ENST00000637387 ARID5AQ03989 594 aa16.47■□□□□ 0.23
CTSD-211ENST00000637387 DSC3Q14574 896 aa16.47■□□□□ 0.23
CTSD-211ENST00000637387 DUOXA2Q1HG44 320 aa16.47■□□□□ 0.23
CTSD-211ENST00000637387 APBB1IPQ7Z5R6 666 aaPredicted RBP16.47■□□□□ 0.23
CTSD-211ENST00000637387 CCDC170Q8IYT3 715 aa16.47■□□□□ 0.23
CTSD-211ENST00000637387 RNF39Q9H2S5 420 aa16.47■□□□□ 0.23
CTSD-211ENST00000637387 HAUS4Q9H6D7 363 aa16.47■□□□□ 0.23
CTSD-211ENST00000637387 PRDM5Q9NQX1 630 aaPredicted RBP16.47■□□□□ 0.23
CTSD-211ENST00000637387 CNTN3Q9P232 1028 aa16.47■□□□□ 0.23
CTSD-211ENST00000637387 PADI3Q9ULW8 664 aa16.47■□□□□ 0.23
CTSD-211ENST00000637387 NUB1Q9Y5A7 615 aa16.47■□□□□ 0.23
CTSD-211ENST00000637387 EIF3CLB5ME19 914 aaKnown RBP16.46■□□□□ 0.23
CTSD-211ENST00000637387 CLTBP09497 229 aa16.46■□□□□ 0.23
CTSD-211ENST00000637387 MYL6P60660 151 aa16.46■□□□□ 0.23
CTSD-211ENST00000637387 FAAP100Q0VG06 881 aa16.46■□□□□ 0.23
CTSD-211ENST00000637387 ZBTB6Q15916 424 aa16.46■□□□□ 0.23
CTSD-211ENST00000637387 TDRD12Q587J7 1177 aaKnown RBP16.46■□□□□ 0.23
CTSD-211ENST00000637387 XKR4Q5GH76 650 aa16.46■□□□□ 0.23
CTSD-211ENST00000637387 NYAP1Q6ZVC0 841 aa16.46■□□□□ 0.23
CTSD-211ENST00000637387 ZNF571Q7Z3V5 609 aaPredicted RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms