RNA–Protein interactions for RNA: ENST00000637156.1

CLN8-213, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,897 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-213ENST00000637156 NDUFA10O95299 355 aa22.7■■□□□ 1.22
CLN8-213ENST00000637156 ZSCAN20P17040 1043 aaPredicted RBP22.7■■□□□ 1.22
CLN8-213ENST00000637156 EIF4A3P38919 411 aaKnown RBP22.7■■□□□ 1.22
CLN8-213ENST00000637156 MFAP3P55082 362 aa22.7■■□□□ 1.22
CLN8-213ENST00000637156 ZBTB6Q15916 424 aa22.7■■□□□ 1.22
CLN8-213ENST00000637156 ASIC2Q16515 512 aa22.7■■□□□ 1.22
CLN8-213ENST00000637156 ASTE1Q2TB18 679 aaPredicted RBP22.7■■□□□ 1.22
CLN8-213ENST00000637156 CCDC170Q8IYT3 715 aa22.7■■□□□ 1.22
CLN8-213ENST00000637156 CAGE1Q8TC20 777 aa22.7■■□□□ 1.22
CLN8-213ENST00000637156 DIS3LQ8TF46 1054 aaKnown RBP22.7■■□□□ 1.22
CLN8-213ENST00000637156 CCDC42Q96M95 316 aa22.7■■□□□ 1.22
CLN8-213ENST00000637156 HAUS4Q9H6D7 363 aa22.7■■□□□ 1.22
CLN8-213ENST00000637156 FAM105AQ9NUU6 356 aa22.7■■□□□ 1.22
CLN8-213ENST00000637156 KLK14Q9P0G3 267 aa22.7■■□□□ 1.22
CLN8-213ENST00000637156 NUB1Q9Y5A7 615 aa22.7■■□□□ 1.22
CLN8-213ENST00000637156 PQBP1O60828 265 aaKnown RBP22.69■■□□□ 1.22
CLN8-213ENST00000637156 GFPT2O94808 682 aa22.69■■□□□ 1.22
CLN8-213ENST00000637156 ASS1P00966 412 aaKnown RBP22.69■■□□□ 1.22
CLN8-213ENST00000637156 COL6A1P12109 1028 aa22.69■■□□□ 1.22
CLN8-213ENST00000637156 GCNT1Q02742 428 aa22.69■■□□□ 1.22
CLN8-213ENST00000637156 KLHL30Q0D2K2 578 aa22.69■■□□□ 1.22
CLN8-213ENST00000637156 DSC3Q14574 896 aa22.69■■□□□ 1.22
CLN8-213ENST00000637156 TMEM132DQ14C87 1099 aa22.69■■□□□ 1.22
CLN8-213ENST00000637156 SGSM1Q2NKQ1 1148 aa22.69■■□□□ 1.22
CLN8-213ENST00000637156 XKR4Q5GH76 650 aa22.69■■□□□ 1.22
CLN8-213ENST00000637156 KIF12Q96FN5 646 aa22.69■■□□□ 1.22
CLN8-213ENST00000637156 RRAGDQ9NQL2 400 aaPredicted RBP22.69■■□□□ 1.22
CLN8-213ENST00000637156 PARP2Q9UGN5 583 aa22.69■■□□□ 1.22
CLN8-213ENST00000637156 PPP2R2CQ9Y2T4 447 aa22.69■■□□□ 1.22
CLN8-213ENST00000637156 MEIS3P2A8K0S8 358 aa22.68■■□□□ 1.22
CLN8-213ENST00000637156 EVI5O60447 810 aa22.68■■□□□ 1.22
CLN8-213ENST00000637156 PRKCIP41743 596 aa22.68■■□□□ 1.22
CLN8-213ENST00000637156 MAPK8IP2Q13387 824 aaPredicted RBP22.68■■□□□ 1.22
CLN8-213ENST00000637156 TRPC3Q13507 836 aa22.68■■□□□ 1.22
CLN8-213ENST00000637156 ANKRD33Q7Z3H0 272 aa22.68■■□□□ 1.22
CLN8-213ENST00000637156 NT5DC4Q86YG4 428 aa22.68■■□□□ 1.22
CLN8-213ENST00000637156 XYLT2Q9H1B5 865 aa22.68■■□□□ 1.22
CLN8-213ENST00000637156 SPTLC3Q9NUV7 552 aa22.68■■□□□ 1.22
CLN8-213ENST00000637156 CNTN3Q9P232 1028 aa22.68■■□□□ 1.22
CLN8-213ENST00000637156 SSU72P8A0A1W2PR75 194 aa22.68■■□□□ 1.22
CLN8-213ENST00000637156 GUCY2FP51841 1108 aa22.68■■□□□ 1.22
CLN8-213ENST00000637156 PTK2Q05397 1052 aa22.68■■□□□ 1.22
CLN8-213ENST00000637156 GPNMBQ14956 572 aa22.68■■□□□ 1.22
CLN8-213ENST00000637156 REXO1L1PQ8IX06 675 aa22.68■■□□□ 1.22
CLN8-213ENST00000637156 ACRBPQ8NEB7 543 aa22.68■■□□□ 1.22
CLN8-213ENST00000637156 SHC3Q92529 594 aa22.68■■□□□ 1.22
CLN8-213ENST00000637156 ARID3AQ99856 593 aa22.68■■□□□ 1.22
CLN8-213ENST00000637156 TRAIPQ9BWF2 469 aa22.68■■□□□ 1.22
CLN8-213ENST00000637156 C1orf112Q9NSG2 853 aa22.68■■□□□ 1.22
CLN8-213ENST00000637156 REXO2Q9Y3B8 237 aaKnown RBP22.68■■□□□ 1.22
CLN8-213ENST00000637156 UMODL1Q5DID0 1318 aa22.67■■□□□ 1.22
CLN8-213ENST00000637156 SMIM28A0A1B0GU29 152 aa22.67■■□□□ 1.22
CLN8-213ENST00000637156 KRT19P08727 400 aa22.67■■□□□ 1.22
CLN8-213ENST00000637156 SELPP16109 830 aa22.67■■□□□ 1.22
CLN8-213ENST00000637156 FERP16591 822 aa22.67■■□□□ 1.22
CLN8-213ENST00000637156 NOP14P78316 857 aaKnown RBP22.67■■□□□ 1.22
CLN8-213ENST00000637156 ZNF571Q7Z3V5 609 aaPredicted RBP22.67■■□□□ 1.22
CLN8-213ENST00000637156 FAM71AQ8IYT1 594 aa22.67■■□□□ 1.22
CLN8-213ENST00000637156 DPP3Q9NY33 737 aa22.67■■□□□ 1.22
CLN8-213ENST00000637156 DERAQ9Y315 318 aa22.67■■□□□ 1.22
CLN8-213ENST00000637156 BZW2Q9Y6E2 419 aaKnown RBP22.67■■□□□ 1.22
CLN8-213ENST00000637156 ANK1P16157 1881 aa22.67■■□□□ 1.22
CLN8-213ENST00000637156 ZNF263O14978 683 aa22.66■■□□□ 1.22
CLN8-213ENST00000637156 ITGB3P05106 788 aa22.66■■□□□ 1.22
CLN8-213ENST00000637156 BFSP2Q13515 415 aa22.66■■□□□ 1.22
CLN8-213ENST00000637156 TDRD12Q587J7 1177 aaKnown RBP22.66■■□□□ 1.22
CLN8-213ENST00000637156 GLRA4Q5JXX5 417 aa22.66■■□□□ 1.22
CLN8-213ENST00000637156 LRRC8DQ7L1W4 858 aa22.66■■□□□ 1.22
CLN8-213ENST00000637156 ENOSF1Q7L5Y1 443 aa22.66■■□□□ 1.22
CLN8-213ENST00000637156 RTN4RL1Q86UN2 441 aaPredicted RBP22.66■■□□□ 1.22
CLN8-213ENST00000637156 ADAM2Q99965 735 aa22.66■■□□□ 1.22
CLN8-213ENST00000637156 A0A0U1RQF3 1178 aa22.66■■□□□ 1.22
CLN8-213ENST00000637156 A0A0U1RQJ8 604 aa22.66■■□□□ 1.22
CLN8-213ENST00000637156 EIF3CLB5ME19 914 aaKnown RBP22.66■■□□□ 1.22
CLN8-213ENST00000637156 ZNF623O75123 536 aa22.66■■□□□ 1.22
CLN8-213ENST00000637156 CLCN1P35523 988 aa22.66■■□□□ 1.22
CLN8-213ENST00000637156 CYLC1P35663 651 aaPredicted RBP22.66■■□□□ 1.22
CLN8-213ENST00000637156 FAAP100Q0VG06 881 aa22.66■■□□□ 1.22
CLN8-213ENST00000637156 C1orf53Q5VUE5 145 aa22.66■■□□□ 1.22
CLN8-213ENST00000637156 ATRIPQ8WXE1 791 aa22.66■■□□□ 1.22
CLN8-213ENST00000637156 C18orf25Q96B23 403 aaPredicted RBP22.66■■□□□ 1.22
CLN8-213ENST00000637156 FAM81BQ96LP2 452 aa22.66■■□□□ 1.22
CLN8-213ENST00000637156 EIF3CQ99613 913 aaKnown RBP22.66■■□□□ 1.22
CLN8-213ENST00000637156 KCNE1P15382 129 aa22.65■■□□□ 1.22
CLN8-213ENST00000637156 KIF11P52732 1056 aa22.65■■□□□ 1.22
CLN8-213ENST00000637156 CYP27A1Q02318 531 aa22.65■■□□□ 1.22
CLN8-213ENST00000637156 CUL2Q13617 745 aa22.65■■□□□ 1.22
CLN8-213ENST00000637156 MRPL10Q7Z7H8 261 aaKnown RBP22.65■■□□□ 1.22
CLN8-213ENST00000637156 GSTCDQ8NEC7 633 aa22.65■■□□□ 1.22
CLN8-213ENST00000637156 PPP1R13BQ96KQ4 1090 aa22.65■■□□□ 1.22
CLN8-213ENST00000637156 TOX2Q96NM4 488 aa22.65■■□□□ 1.22
CLN8-213ENST00000637156 IFIH1Q9BYX4 1025 aaKnown RBP22.65■■□□□ 1.22
CLN8-213ENST00000637156 IMPG2Q9BZV3 1241 aa22.65■■□□□ 1.22
CLN8-213ENST00000637156 ADAMTS1Q9UHI8 967 aa22.65■■□□□ 1.22
CLN8-213ENST00000637156 AKR1B10O60218 316 aa22.64■■□□□ 1.22
CLN8-213ENST00000637156 NBNO60934 754 aa22.64■■□□□ 1.22
CLN8-213ENST00000637156 LCA5LO95447 670 aa22.64■■□□□ 1.22
CLN8-213ENST00000637156 CCDC175P0C221 793 aa22.64■■□□□ 1.22
CLN8-213ENST00000637156 ACO1P21399 889 aaKnown RBP22.64■■□□□ 1.22
CLN8-213ENST00000637156 USP8P40818 1118 aa22.64■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms