RNA–Protein interactions for RNA: ENST00000635828.1

CDKL5-209, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5 BASIC

Gene CDKL5, Length 3,823 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-209ENST00000635828 C2CD2LO14523 706 aa9.23□□□□□ -0.93
CDKL5-209ENST00000635828 KRT19P08727 400 aa9.23□□□□□ -0.93
CDKL5-209ENST00000635828 CCDC192P0DO97 292 aa9.23□□□□□ -0.93
CDKL5-209ENST00000635828 BFSP1Q12934 665 aa9.23□□□□□ -0.93
CDKL5-209ENST00000635828 GRIN2CQ14957 1233 aa9.23□□□□□ -0.93
CDKL5-209ENST00000635828 UPP1Q16831 310 aa9.23□□□□□ -0.93
CDKL5-209ENST00000635828 EDRF1Q3B7T1 1238 aa9.23□□□□□ -0.93
CDKL5-209ENST00000635828 EPC2Q52LR7 807 aa9.23□□□□□ -0.93
CDKL5-209ENST00000635828 SLC9A9Q8IVB4 645 aa9.23□□□□□ -0.93
CDKL5-209ENST00000635828 C12orf56Q8IXR9 622 aa9.23□□□□□ -0.93
CDKL5-209ENST00000635828 SLC35C1Q96A29 364 aa9.23□□□□□ -0.93
CDKL5-209ENST00000635828 PGBD4Q96DM1 585 aa9.23□□□□□ -0.93
CDKL5-209ENST00000635828 LPIN3Q9BQK8 851 aa9.23□□□□□ -0.93
CDKL5-209ENST00000635828 CRACR2AQ9BSW2 395 aa9.23□□□□□ -0.93
CDKL5-209ENST00000635828 KCNG1Q9UIX4 513 aa9.23□□□□□ -0.93
CDKL5-209ENST00000635828 CALCAP01258 141 aa9.23□□□□□ -0.93
CDKL5-209ENST00000635828 POLR2BP30876 1174 aaKnown RBP9.23□□□□□ -0.93
CDKL5-209ENST00000635828 VAMP7P51809 220 aa9.23□□□□□ -0.93
CDKL5-209ENST00000635828 LRRC63Q05C16 580 aa9.23□□□□□ -0.93
CDKL5-209ENST00000635828 STIM1Q13586 685 aa9.23□□□□□ -0.93
CDKL5-209ENST00000635828 TMEM132DQ14C87 1099 aa9.23□□□□□ -0.93
CDKL5-209ENST00000635828 KCNT2Q6UVM3 1135 aa9.23□□□□□ -0.93
CDKL5-209ENST00000635828 LRSAM1Q6UWE0 723 aa9.23□□□□□ -0.93
CDKL5-209ENST00000635828 GLYCTKQ8IVS8 523 aa9.23□□□□□ -0.93
CDKL5-209ENST00000635828 SP7Q8TDD2 431 aaPredicted RBP9.23□□□□□ -0.93
CDKL5-209ENST00000635828 TAS1R2Q8TE23 839 aa9.23□□□□□ -0.93
CDKL5-209ENST00000635828 SYAP1Q96A49 352 aaPredicted RBP9.23□□□□□ -0.93
CDKL5-209ENST00000635828 TAB2Q9NYJ8 693 aa9.23□□□□□ -0.93
CDKL5-209ENST00000635828 FRMD4BQ9Y2L6 1034 aa9.23□□□□□ -0.93
CDKL5-209ENST00000635828 MYO15AQ9UKN7 3530 aa9.22□□□□□ -0.93
CDKL5-209ENST00000635828 CETN3O15182 167 aa9.22□□□□□ -0.93
CDKL5-209ENST00000635828 GRM6O15303 877 aa9.22□□□□□ -0.93
CDKL5-209ENST00000635828 B3GAT3O94766 335 aa9.22□□□□□ -0.93
CDKL5-209ENST00000635828 GTF2F1P35269 517 aaKnown RBP eCLIP9.22□□□□□ -0.93
CDKL5-209ENST00000635828 MIIPQ5JXC2 388 aa9.22□□□□□ -0.93
CDKL5-209ENST00000635828 SV2AQ7L0J3 742 aa9.22□□□□□ -0.93
CDKL5-209ENST00000635828 PHOSPHO2Q8TCD6 241 aa9.22□□□□□ -0.93
CDKL5-209ENST00000635828 ARID3AQ99856 593 aa9.22□□□□□ -0.93
CDKL5-209ENST00000635828 VPS16Q9H269 839 aa9.22□□□□□ -0.93
CDKL5-209ENST00000635828 PRDM12Q9H4Q4 367 aa9.22□□□□□ -0.93
CDKL5-209ENST00000635828 NME7Q9Y5B8 376 aa9.22□□□□□ -0.93
CDKL5-209ENST00000635828 KCNE1P15382 129 aa9.22□□□□□ -0.93
CDKL5-209ENST00000635828 RPL17P18621 184 aaKnown RBP9.22□□□□□ -0.93
CDKL5-209ENST00000635828 PSMC2P35998 433 aaKnown RBP9.22□□□□□ -0.93
CDKL5-209ENST00000635828 ERVFC1P60507 584 aa9.22□□□□□ -0.93
CDKL5-209ENST00000635828 LRMPQ12912 555 aa9.22□□□□□ -0.93
CDKL5-209ENST00000635828 ORC1Q13415 861 aa9.22□□□□□ -0.93
CDKL5-209ENST00000635828 PSMD6Q15008 389 aa9.22□□□□□ -0.93
CDKL5-209ENST00000635828 GJB7Q6PEY0 223 aa9.22□□□□□ -0.93
CDKL5-209ENST00000635828 APTXQ7Z2E3 356 aaKnown RBP9.22□□□□□ -0.93
CDKL5-209ENST00000635828 FIBCD1Q8N539 461 aa9.22□□□□□ -0.93
CDKL5-209ENST00000635828 COLGALT1Q8NBJ5 622 aa9.22□□□□□ -0.93
CDKL5-209ENST00000635828 TIFAQ96CG3 184 aa9.22□□□□□ -0.93
CDKL5-209ENST00000635828 DPP3Q9NY33 737 aa9.22□□□□□ -0.93
CDKL5-209ENST00000635828 BRWD1Q9NSI6 2320 aa9.22□□□□□ -0.93
CDKL5-209ENST00000635828 C4BPAP04003 597 aaKnown RBP9.22□□□□□ -0.93
CDKL5-209ENST00000635828 CTNNB1P35222 781 aa9.22□□□□□ -0.93
CDKL5-209ENST00000635828 RAP1GAPP47736 663 aa9.22□□□□□ -0.93
CDKL5-209ENST00000635828 MYL6P60660 151 aa9.22□□□□□ -0.93
CDKL5-209ENST00000635828 TRAPPC11Q7Z392 1133 aa9.22□□□□□ -0.93
CDKL5-209ENST00000635828 LRRC43Q8N309 656 aa9.22□□□□□ -0.93
CDKL5-209ENST00000635828 NAP1L5Q96NT1 182 aaPredicted RBP9.22□□□□□ -0.93
CDKL5-209ENST00000635828 INTS13Q9NVM9 706 aa9.22□□□□□ -0.93
CDKL5-209ENST00000635828 AJAP1Q9UKB5 411 aaPredicted RBP9.22□□□□□ -0.93
CDKL5-209ENST00000635828 POLIQ9UNA4 740 aa9.22□□□□□ -0.93
CDKL5-209ENST00000635828 PODXLO00592 558 aa9.21□□□□□ -0.93
CDKL5-209ENST00000635828 LPXNO60711 386 aa9.21□□□□□ -0.93
CDKL5-209ENST00000635828 ADGRE1Q14246 886 aa9.21□□□□□ -0.93
CDKL5-209ENST00000635828 CCDC40Q4G0X9 1142 aa9.21□□□□□ -0.93
CDKL5-209ENST00000635828 TIGD5Q53EQ6 642 aa9.21□□□□□ -0.93
CDKL5-209ENST00000635828 HABP4Q5JVS0 413 aaKnown RBP9.21□□□□□ -0.93
CDKL5-209ENST00000635828 SPATA1Q5VX52 437 aa9.21□□□□□ -0.93
CDKL5-209ENST00000635828 C9orf57Q5W0N0 161 aa9.21□□□□□ -0.93
CDKL5-209ENST00000635828 RSPO2Q6UXX9 243 aaPredicted RBP9.21□□□□□ -0.93
CDKL5-209ENST00000635828 CLP1Q92989 425 aaKnown RBP9.21□□□□□ -0.93
CDKL5-209ENST00000635828 KAT5Q92993 513 aa9.21□□□□□ -0.93
CDKL5-209ENST00000635828 TSG101Q99816 390 aa9.21□□□□□ -0.93
CDKL5-209ENST00000635828 SLC28A3Q9HAS3 691 aa9.21□□□□□ -0.93
CDKL5-209ENST00000635828 APOBEC3GQ9HC16 384 aaKnown RBP9.21□□□□□ -0.93
CDKL5-209ENST00000635828 AGAP1Q9UPQ3 857 aa9.21□□□□□ -0.93
CDKL5-209ENST00000635828 KCNJ18B7U540 433 aa9.21□□□□□ -0.94
CDKL5-209ENST00000635828 TEX33O43247 280 aa9.21□□□□□ -0.94
CDKL5-209ENST00000635828 EFCAB14O75071 495 aa9.21□□□□□ -0.94
CDKL5-209ENST00000635828 ERCC5P28715 1186 aaPredicted RBP9.21□□□□□ -0.94
CDKL5-209ENST00000635828 CDH8P55286 799 aa9.21□□□□□ -0.94
CDKL5-209ENST00000635828 GRIK3Q13003 919 aa9.21□□□□□ -0.94
CDKL5-209ENST00000635828 KCNJ12Q14500 433 aa9.21□□□□□ -0.94
CDKL5-209ENST00000635828 LRIT3Q3SXY7 679 aa9.21□□□□□ -0.94
CDKL5-209ENST00000635828 CDKAL1Q5VV42 579 aa9.21□□□□□ -0.94
CDKL5-209ENST00000635828 CEP57Q86XR8 500 aa9.21□□□□□ -0.94
CDKL5-209ENST00000635828 ENOX1Q8TC92 643 aaKnown RBP9.21□□□□□ -0.94
CDKL5-209ENST00000635828 FNBP1Q96RU3 617 aa9.21□□□□□ -0.94
CDKL5-209ENST00000635828 ZNF576Q9H609 170 aa9.21□□□□□ -0.94
CDKL5-209ENST00000635828 DOCK6Q96HP0 2047 aa9.21□□□□□ -0.94
CDKL5-209ENST00000635828 HIDE1A8MVS5 230 aa9.21□□□□□ -0.94
CDKL5-209ENST00000635828 PER2O15055 1255 aa9.21□□□□□ -0.94
CDKL5-209ENST00000635828 FGF18O76093 207 aa9.21□□□□□ -0.94
CDKL5-209ENST00000635828 LDHAP00338 332 aaKnown RBP9.21□□□□□ -0.94
CDKL5-209ENST00000635828 SKIP12755 728 aa9.21□□□□□ -0.94
CDKL5-209ENST00000635828 ZNF18P17022 549 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms