RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 CLEC11AQ9Y240 323 aa4.84□□□□□ -1.63
SCN1A-210ENST00000635776 EIF3HO15372 352 aaKnown RBP eCLIP4.84□□□□□ -1.636e-7■■■■□ 20.9
SCN1A-210ENST00000635776 EZRP15311 586 aaKnown RBP4.84□□□□□ -1.63
SCN1A-210ENST00000635776 KCNA2P16389 499 aa4.84□□□□□ -1.63
SCN1A-210ENST00000635776 RASSF2P50749 326 aa4.84□□□□□ -1.63
SCN1A-210ENST00000635776 ZNF410Q86VK4 478 aa4.84□□□□□ -1.63
SCN1A-210ENST00000635776 PHF13Q86YI8 300 aaPredicted RBP4.84□□□□□ -1.63
SCN1A-210ENST00000635776 SELENOSQ9BQE4 189 aa4.84□□□□□ -1.63
SCN1A-210ENST00000635776 TUBB6Q9BUF5 446 aa4.84□□□□□ -1.63
SCN1A-210ENST00000635776 AP1M1Q9BXS5 423 aa4.84□□□□□ -1.63
SCN1A-210ENST00000635776 GCOM2Q9BZD3 368 aaPredicted RBP4.84□□□□□ -1.63
SCN1A-210ENST00000635776 SIX2Q9NPC8 291 aa4.84□□□□□ -1.63
SCN1A-210ENST00000635776 DMGDHQ9UI17 866 aaKnown RBP4.84□□□□□ -1.63
SCN1A-210ENST00000635776 ZNF214Q9UL59 606 aaPredicted RBP4.84□□□□□ -1.63
SCN1A-210ENST00000635776 AXLP30530 894 aa4.84□□□□□ -1.63
SCN1A-210ENST00000635776 KLHL38Q2WGJ6 581 aa4.84□□□□□ -1.63
SCN1A-210ENST00000635776 ANO5Q75V66 913 aa4.84□□□□□ -1.63
SCN1A-210ENST00000635776 GPRC5AQ8NFJ5 357 aa4.84□□□□□ -1.63
SCN1A-210ENST00000635776 BEST2Q8NFU1 509 aa4.84□□□□□ -1.63
SCN1A-210ENST00000635776 TRIM31Q9BZY9 425 aa4.84□□□□□ -1.63
SCN1A-210ENST00000635776 SLC45A1Q9Y2W3 748 aa4.84□□□□□ -1.63
SCN1A-210ENST00000635776 STYXL1Q9Y6J8 313 aa4.84□□□□□ -1.63
SCN1A-210ENST00000635776 MCF2LO15068 1137 aa4.84□□□□□ -1.63
SCN1A-210ENST00000635776 CDH16O75309 829 aa4.84□□□□□ -1.63
SCN1A-210ENST00000635776 ERBB2P04626 1255 aa4.84□□□□□ -1.63
SCN1A-210ENST00000635776 TSHRP16473 764 aa4.84□□□□□ -1.63
SCN1A-210ENST00000635776 TCF7P36402 384 aaPredicted RBP4.84□□□□□ -1.63
SCN1A-210ENST00000635776 IL9RQ01113 521 aa4.84□□□□□ -1.63
SCN1A-210ENST00000635776 CBWD6Q4V339 395 aa4.84□□□□□ -1.63
SCN1A-210ENST00000635776 CBWD3Q5JTY5 395 aa4.84□□□□□ -1.63
SCN1A-210ENST00000635776 CBWD5Q5RIA9 395 aa4.84□□□□□ -1.63
SCN1A-210ENST00000635776 FYB2Q5VWT5 728 aa4.84□□□□□ -1.63
SCN1A-210ENST00000635776 PLA2G4FQ68DD2 849 aa4.84□□□□□ -1.63
SCN1A-210ENST00000635776 GLIS3Q8NEA6 775 aa4.84□□□□□ -1.63
SCN1A-210ENST00000635776 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.84□□□□□ -1.63
SCN1A-210ENST00000635776 DHX33Q9H6R0 707 aaKnown RBP4.84□□□□□ -1.63
SCN1A-210ENST00000635776 INTS9Q9NV88 658 aaKnown RBP4.84□□□□□ -1.63
SCN1A-210ENST00000635776 RCCD1A6NED2 376 aa4.84□□□□□ -1.63
SCN1A-210ENST00000635776 SPDYE5A6NIY4 337 aa4.84□□□□□ -1.63
SCN1A-210ENST00000635776 LRRIQ3A6PVS8 624 aaPredicted RBP4.84□□□□□ -1.63
SCN1A-210ENST00000635776 TFAMQ00059 246 aaKnown RBP4.84□□□□□ -1.63
SCN1A-210ENST00000635776 PPP3CAQ08209 521 aa4.84□□□□□ -1.63
SCN1A-210ENST00000635776 FEZF2Q8TBJ5 459 aa4.84□□□□□ -1.63
SCN1A-210ENST00000635776 TEPSINQ96N21 525 aa4.84□□□□□ -1.63
SCN1A-210ENST00000635776 TBCBQ99426 244 aa4.84□□□□□ -1.63
SCN1A-210ENST00000635776 TMEM109Q9BVC6 243 aa4.84□□□□□ -1.63
SCN1A-210ENST00000635776 HAUS2Q9NVX0 235 aa4.84□□□□□ -1.63
SCN1A-210ENST00000635776 AMACRQ9UHK6 382 aa4.84□□□□□ -1.63
SCN1A-210ENST00000635776 ATP8A1Q9Y2Q0 1164 aa4.84□□□□□ -1.63
SCN1A-210ENST00000635776 NUDT17P0C025 328 aa4.84□□□□□ -1.63
SCN1A-210ENST00000635776 WEE2P0C1S8 567 aa4.84□□□□□ -1.63
SCN1A-210ENST00000635776 COILP38432 576 aaPredicted RBP4.84□□□□□ -1.63
SCN1A-210ENST00000635776 THNSL1Q8IYQ7 743 aa4.84□□□□□ -1.63
SCN1A-210ENST00000635776 C12orf50Q8NA57 414 aaPredicted RBP4.84□□□□□ -1.63
SCN1A-210ENST00000635776 TAS1R2Q8TE23 839 aa4.84□□□□□ -1.63
SCN1A-210ENST00000635776 ALKBH8Q96BT7 664 aaKnown RBP4.84□□□□□ -1.63
SCN1A-210ENST00000635776 SGSM3Q96HU1 749 aa4.84□□□□□ -1.63
SCN1A-210ENST00000635776 SERPINB12Q96P63 405 aa4.84□□□□□ -1.63
SCN1A-210ENST00000635776 C11orf70Q9BRQ4 267 aa4.84□□□□□ -1.63
SCN1A-210ENST00000635776 LRRC19Q9H756 370 aa4.84□□□□□ -1.63
SCN1A-210ENST00000635776 RASSF10A6NK89 507 aa4.84□□□□□ -1.64
SCN1A-210ENST00000635776 MDH1P40925 334 aaKnown RBP4.84□□□□□ -1.64
SCN1A-210ENST00000635776 GTF2A2P52657 109 aa4.84□□□□□ -1.64
SCN1A-210ENST00000635776 ATF7IP2Q5U623 682 aa4.84□□□□□ -1.64
SCN1A-210ENST00000635776 MCOLN2Q8IZK6 566 aa4.84□□□□□ -1.64
SCN1A-210ENST00000635776 PDIK1LQ8N165 341 aa4.84□□□□□ -1.64
SCN1A-210ENST00000635776 LNX1Q8TBB1 728 aaPredicted RBP4.84□□□□□ -1.64
SCN1A-210ENST00000635776 AP5M1Q9H0R1 490 aa4.84□□□□□ -1.64
SCN1A-210ENST00000635776 UBN1Q9NPG3 1134 aa4.84□□□□□ -1.64
SCN1A-210ENST00000635776 TNFSF13BQ9Y275 285 aa4.84□□□□□ -1.64
SCN1A-210ENST00000635776 AFG3L2Q9Y4W6 797 aa4.84□□□□□ -1.64
SCN1A-210ENST00000635776 AP3B1O00203 1094 aa4.84□□□□□ -1.64
SCN1A-210ENST00000635776 CD4P01730 458 aa4.84□□□□□ -1.64
SCN1A-210ENST00000635776 STIP1P31948 543 aaKnown RBP4.84□□□□□ -1.64
SCN1A-210ENST00000635776 ACADSBP45954 432 aa4.84□□□□□ -1.64
SCN1A-210ENST00000635776 SLC7A5Q01650 507 aa4.84□□□□□ -1.64
SCN1A-210ENST00000635776 RNF187Q5TA31 235 aaPredicted RBP4.84□□□□□ -1.64
SCN1A-210ENST00000635776 POLNQ7Z5Q5 900 aa4.84□□□□□ -1.64
SCN1A-210ENST00000635776 C2orf69Q8N8R5 385 aa4.84□□□□□ -1.64
SCN1A-210ENST00000635776 FBF1Q8TES7 1133 aa4.84□□□□□ -1.64
SCN1A-210ENST00000635776 FBXO41Q8TF61 875 aa4.84□□□□□ -1.64
SCN1A-210ENST00000635776 SLCO2A1Q92959 643 aa4.84□□□□□ -1.64
SCN1A-210ENST00000635776 SMG5Q9UPR3 1016 aaKnown RBP4.84□□□□□ -1.64
SCN1A-210ENST00000635776 TULP2O00295 520 aa4.83□□□□□ -1.64
SCN1A-210ENST00000635776 CARSP49589 748 aaKnown RBP4.83□□□□□ -1.64
SCN1A-210ENST00000635776 ZNF268Q14587 947 aaPredicted RBP4.83□□□□□ -1.64
SCN1A-210ENST00000635776 PHLDB3Q6NSJ2 640 aa4.83□□□□□ -1.64
SCN1A-210ENST00000635776 CCDC25Q86WR0 208 aa4.83□□□□□ -1.64
SCN1A-210ENST00000635776 KATNAL2Q8IYT4 538 aa4.83□□□□□ -1.64
SCN1A-210ENST00000635776 RNF149Q8NC42 400 aa4.83□□□□□ -1.64
SCN1A-210ENST00000635776 LRRC15Q8TF66 581 aa4.83□□□□□ -1.64
SCN1A-210ENST00000635776 ZKSCAN4Q969J2 545 aaPredicted RBP4.83□□□□□ -1.64
SCN1A-210ENST00000635776 CENPTQ96BT3 561 aa4.83□□□□□ -1.64
SCN1A-210ENST00000635776 EPC1Q9H2F5 836 aa4.83□□□□□ -1.64
SCN1A-210ENST00000635776 RNF181Q9P0P0 153 aa4.83□□□□□ -1.64
SCN1A-210ENST00000635776 USTQ9Y2C2 406 aa4.83□□□□□ -1.64
SCN1A-210ENST00000635776 DERAQ9Y315 318 aa4.83□□□□□ -1.64
SCN1A-210ENST00000635776 GMNCA6NCL1 334 aa4.83□□□□□ -1.64
SCN1A-210ENST00000635776 FSCN2O14926 492 aa4.83□□□□□ -1.64
SCN1A-210ENST00000635776 KPNA6O60684 536 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms