RNA–Protein interactions for RNA: ENST00000635761.1

CLN5-204, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 4

Gene CLN5, Length 549 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-204ENST00000635761 CALM2P0DP24 149 aa8.13□□□□□ -1.11
CLN5-204ENST00000635761 CALM3P0DP25 149 aa8.13□□□□□ -1.11
CLN5-204ENST00000635761 IGBP1P78318 339 aa8.13□□□□□ -1.11
CLN5-204ENST00000635761 PLCB4Q15147 1175 aa8.13□□□□□ -1.11
CLN5-204ENST00000635761 UBE2SQ16763 222 aa8.13□□□□□ -1.11
CLN5-204ENST00000635761 FANCBQ8NB91 859 aa8.13□□□□□ -1.11
CLN5-204ENST00000635761 SMRP1Q8NCR6 262 aa8.13□□□□□ -1.11
CLN5-204ENST00000635761 TRAPPC12Q8WVT3 735 aa8.13□□□□□ -1.11
CLN5-204ENST00000635761 POF1BQ8WVV4 589 aa8.13□□□□□ -1.11
CLN5-204ENST00000635761 TNPO1Q92973 898 aaKnown RBP8.13□□□□□ -1.11
CLN5-204ENST00000635761 GAL3ST3Q96A11 431 aa8.13□□□□□ -1.11
CLN5-204ENST00000635761 TMEM87BQ96K49 555 aa8.13□□□□□ -1.11
CLN5-204ENST00000635761 MXRA8Q9BRK3 442 aa8.13□□□□□ -1.11
CLN5-204ENST00000635761 FAM49AQ9H0Q0 323 aaPredicted RBP8.13□□□□□ -1.11
CLN5-204ENST00000635761 SEMA6CQ9H3T2 930 aa8.13□□□□□ -1.11
CLN5-204ENST00000635761 SLC9A2Q9UBY0 812 aa8.13□□□□□ -1.11
CLN5-204ENST00000635761 RBM8AQ9Y5S9 174 aaKnown RBP8.13□□□□□ -1.11
CLN5-204ENST00000635761 CCDC69A6NI79 296 aa8.12□□□□□ -1.11
CLN5-204ENST00000635761 MEIS1O00470 390 aa8.12□□□□□ -1.11
CLN5-204ENST00000635761 SH2B2O14492 632 aaPredicted RBP8.12□□□□□ -1.11
CLN5-204ENST00000635761 STAG3L1P0CL83 205 aa8.12□□□□□ -1.11
CLN5-204ENST00000635761 ARP10275 920 aa8.12□□□□□ -1.11
CLN5-204ENST00000635761 SCG2P13521 617 aa8.12□□□□□ -1.11
CLN5-204ENST00000635761 RXRAP19793 462 aa8.12□□□□□ -1.11
CLN5-204ENST00000635761 KLRC1P26715 233 aa8.12□□□□□ -1.11
CLN5-204ENST00000635761 NRIP1P48552 1158 aa8.12□□□□□ -1.11
CLN5-204ENST00000635761 NDUFV1P49821 464 aa8.12□□□□□ -1.11
CLN5-204ENST00000635761 GATMP50440 423 aa8.12□□□□□ -1.11
CLN5-204ENST00000635761 SLC26A2P50443 739 aa8.12□□□□□ -1.11
CLN5-204ENST00000635761 STAT5BP51692 787 aa8.12□□□□□ -1.11
CLN5-204ENST00000635761 ACTR2P61160 394 aa8.12□□□□□ -1.11
CLN5-204ENST00000635761 PAK2Q13177 524 aa8.12□□□□□ -1.11
CLN5-204ENST00000635761 PWP1Q13610 501 aa8.12□□□□□ -1.11
CLN5-204ENST00000635761 KCNC3Q14003 757 aa8.12□□□□□ -1.11
CLN5-204ENST00000635761 CBX2Q14781 532 aaPredicted RBP8.12□□□□□ -1.11
CLN5-204ENST00000635761 NECTIN1Q15223 517 aa8.12□□□□□ -1.11
CLN5-204ENST00000635761 NFKBIBQ15653 356 aa8.12□□□□□ -1.11
CLN5-204ENST00000635761 PAN2Q504Q3 1202 aaKnown RBP8.12□□□□□ -1.11
CLN5-204ENST00000635761 CASC1Q6TDU7 716 aa8.12□□□□□ -1.11
CLN5-204ENST00000635761 MTHFD1LQ6UB35 978 aa8.12□□□□□ -1.11
CLN5-204ENST00000635761 RBM23Q86U06 439 aaKnown RBP8.12□□□□□ -1.11
CLN5-204ENST00000635761 TEX2Q8IWB9 1127 aa8.12□□□□□ -1.11
CLN5-204ENST00000635761 ATP8B4Q8TF62 1192 aa8.12□□□□□ -1.11
CLN5-204ENST00000635761 MIR1-1HGQ9H1L0 117 aa8.12□□□□□ -1.11
CLN5-204ENST00000635761 AZI2Q9H6S1 392 aa8.12□□□□□ -1.11
CLN5-204ENST00000635761 AGO4Q9HCK5 861 aaKnown RBP8.12□□□□□ -1.11
CLN5-204ENST00000635761 RGS18Q9NS28 235 aa8.12□□□□□ -1.11
CLN5-204ENST00000635761 TRPV2Q9Y5S1 764 aa8.12□□□□□ -1.11
CLN5-204ENST00000635761 ZFHX2Q9C0A1 2572 aaPredicted RBP8.12□□□□□ -1.11
CLN5-204ENST00000635761 TMEM221A6NGB7 291 aa8.11□□□□□ -1.11
CLN5-204ENST00000635761 M0QZ92 97 aa8.11□□□□□ -1.11
CLN5-204ENST00000635761 M0R296 226 aa8.11□□□□□ -1.11
CLN5-204ENST00000635761 MGEA5O60502 916 aa8.11□□□□□ -1.11
CLN5-204ENST00000635761 TFE3P19532 575 aaPredicted RBP8.11□□□□□ -1.11
CLN5-204ENST00000635761 SARSP49591 514 aaKnown RBP8.11□□□□□ -1.11
CLN5-204ENST00000635761 ERVFC1P60507 584 aa8.11□□□□□ -1.11
CLN5-204ENST00000635761 FAM189BP81408 668 aa8.11□□□□□ -1.11
CLN5-204ENST00000635761 ZXDAP98168 799 aa8.11□□□□□ -1.11
CLN5-204ENST00000635761 UBE3AQ05086 875 aa8.11□□□□□ -1.11
CLN5-204ENST00000635761 ITGB3BPQ13352 177 aaPredicted RBP8.11□□□□□ -1.11
CLN5-204ENST00000635761 TMEM266Q2M3C6 531 aa8.11□□□□□ -1.11
CLN5-204ENST00000635761 CEP55Q53EZ4 464 aa8.11□□□□□ -1.11
CLN5-204ENST00000635761 FAM102BQ5T8I3 360 aa8.11□□□□□ -1.11
CLN5-204ENST00000635761 ABHD15Q6UXT9 468 aa8.11□□□□□ -1.11
CLN5-204ENST00000635761 TMEM184AQ6ZMB5 413 aa8.11□□□□□ -1.11
CLN5-204ENST00000635761 NFXL1Q6ZNB6 911 aa8.11□□□□□ -1.11
CLN5-204ENST00000635761 TMTC3Q6ZXV5 915 aa8.11□□□□□ -1.11
CLN5-204ENST00000635761 SGMS1Q86VZ5 419 aa8.11□□□□□ -1.11
CLN5-204ENST00000635761 KIAA0319LQ8IZA0 1049 aa8.11□□□□□ -1.11
CLN5-204ENST00000635761 PHC3Q8NDX5 983 aa8.11□□□□□ -1.11
CLN5-204ENST00000635761 PPP2R3CQ969Q6 453 aa8.11□□□□□ -1.11
CLN5-204ENST00000635761 ELMO3Q96BJ8 720 aa8.11□□□□□ -1.11
CLN5-204ENST00000635761 SDF4Q9BRK5 362 aa8.11□□□□□ -1.11
CLN5-204ENST00000635761 RSRP1Q9BUV0 290 aa8.11□□□□□ -1.11
CLN5-204ENST00000635761 LSG1Q9H089 658 aaKnown RBP8.11□□□□□ -1.11
CLN5-204ENST00000635761 TLE6Q9H808 572 aa8.11□□□□□ -1.11
CLN5-204ENST00000635761 ERVK-5Q9HDB9 667 aa8.11□□□□□ -1.11
CLN5-204ENST00000635761 RIC8AQ9NPQ8 531 aa8.11□□□□□ -1.11
CLN5-204ENST00000635761 NOC2LQ9Y3T9 749 aaKnown RBP8.11□□□□□ -1.11
CLN5-204ENST00000635761 USP15Q9Y4E8 981 aaPredicted RBP8.11□□□□□ -1.11
CLN5-204ENST00000635761 PCDHB7Q9Y5E2 793 aa8.11□□□□□ -1.11
CLN5-204ENST00000635761 PCDHB12Q9Y5F1 795 aa8.11□□□□□ -1.11
CLN5-204ENST00000635761 SLC12A7Q9Y666 1083 aa8.11□□□□□ -1.11
CLN5-204ENST00000635761 COL1A2P08123 1366 aa8.1□□□□□ -1.11
CLN5-204ENST00000635761 RALGAPA1Q6GYQ0 2036 aa8.1□□□□□ -1.11
CLN5-204ENST00000635761 MYH11P35749 1972 aa8.1□□□□□ -1.11
CLN5-204ENST00000635761 C9IYK1 514 aa8.1□□□□□ -1.11
CLN5-204ENST00000635761 SLC27A2O14975 620 aa8.1□□□□□ -1.11
CLN5-204ENST00000635761 PER2O15055 1255 aa8.1□□□□□ -1.11
CLN5-204ENST00000635761 HBP1O60381 514 aa8.1□□□□□ -1.11
CLN5-204ENST00000635761 RPS6KA5O75582 802 aa8.1□□□□□ -1.11
CLN5-204ENST00000635761 FGF18O76093 207 aa8.1□□□□□ -1.11
CLN5-204ENST00000635761 CSPG5O95196 566 aa8.1□□□□□ -1.11
CLN5-204ENST00000635761 CCNE2O96020 404 aa8.1□□□□□ -1.11
CLN5-204ENST00000635761 FOSP01100 380 aaPredicted RBP8.1□□□□□ -1.11
CLN5-204ENST00000635761 ATF7P17544 494 aaPredicted RBP8.1□□□□□ -1.11
CLN5-204ENST00000635761 RBM10P98175 930 aaKnown RBP8.1□□□□□ -1.11
CLN5-204ENST00000635761 SEPT6Q14141 434 aa8.1□□□□□ -1.11
CLN5-204ENST00000635761 PKN1Q16512 942 aa8.1□□□□□ -1.11
CLN5-204ENST00000635761 SLC24A5Q71RS6 500 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms