RNA–Protein interactions for RNA: ENST00000629045.1

SCARNA4-201, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 128 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-201ENST00000629045 TBC1D15Q8TC07 691 aa3.2□□□□□ -1.9
SCARNA4-201ENST00000629045 NSUN6Q8TEA1 469 aaKnown RBP3.2□□□□□ -1.9
SCARNA4-201ENST00000629045 HOOK2Q96ED9 719 aa3.2□□□□□ -1.9
SCARNA4-201ENST00000629045 MYEOVQ96EZ4 313 aa3.2□□□□□ -1.9
SCARNA4-201ENST00000629045 CLPTM1LQ96KA5 538 aa3.2□□□□□ -1.9
SCARNA4-201ENST00000629045 MRGPRX4Q96LA9 322 aa3.2□□□□□ -1.9
SCARNA4-201ENST00000629045 DMRTA2Q96SC8 542 aa3.2□□□□□ -1.9
SCARNA4-201ENST00000629045 VRK1Q99986 396 aaPredicted RBP3.2□□□□□ -1.9
SCARNA4-201ENST00000629045 MRIQ9BWK5 157 aa3.2□□□□□ -1.9
SCARNA4-201ENST00000629045 GSTO2Q9H4Y5 243 aa3.2□□□□□ -1.9
SCARNA4-201ENST00000629045 AASDHPPTQ9NRN7 309 aa3.2□□□□□ -1.9
SCARNA4-201ENST00000629045 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.2□□□□□ -1.9
SCARNA4-201ENST00000629045 IP6K2Q9UHH9 426 aa3.2□□□□□ -1.9
SCARNA4-201ENST00000629045 SLC45A2Q9UMX9 530 aa3.2□□□□□ -1.9
SCARNA4-201ENST00000629045 ATP11BQ9Y2G3 1177 aa3.2□□□□□ -1.9
SCARNA4-201ENST00000629045 FPGT-TNNI3KV9GXZ4 949 aa3.2□□□□□ -1.9
SCARNA4-201ENST00000629045 A0A1B0GTW7 788 aa3.19□□□□□ -1.9
SCARNA4-201ENST00000629045 GAGE12BA1L429 117 aa3.19□□□□□ -1.9
SCARNA4-201ENST00000629045 GRID2IPA4D2P6 1211 aa3.19□□□□□ -1.9
SCARNA4-201ENST00000629045 GAGE12HA6NDE8 117 aa3.19□□□□□ -1.9
SCARNA4-201ENST00000629045 DIRC3C9JPN6 131 aa3.19□□□□□ -1.9
SCARNA4-201ENST00000629045 SGTAO43765 313 aa3.19□□□□□ -1.9
SCARNA4-201ENST00000629045 ALDH1L1O75891 902 aa3.19□□□□□ -1.9
SCARNA4-201ENST00000629045 ZFPL1O95159 310 aa3.19□□□□□ -1.9
SCARNA4-201ENST00000629045 SPDEFO95238 335 aa3.19□□□□□ -1.9
SCARNA4-201ENST00000629045 CFIP05156 583 aa3.19□□□□□ -1.9
SCARNA4-201ENST00000629045 PF4V1P10720 104 aa3.19□□□□□ -1.9
SCARNA4-201ENST00000629045 FCER1AP12319 257 aa3.19□□□□□ -1.9
SCARNA4-201ENST00000629045 ALAS1P13196 640 aa3.19□□□□□ -1.9
SCARNA4-201ENST00000629045 GCSHP23434 173 aa3.19□□□□□ -1.9
SCARNA4-201ENST00000629045 HMGA2P52926 109 aa3.19□□□□□ -1.9
SCARNA4-201ENST00000629045 DSC2Q02487 901 aa3.19□□□□□ -1.9
SCARNA4-201ENST00000629045 RESTQ13127 1097 aa3.19□□□□□ -1.9
SCARNA4-201ENST00000629045 TTF1Q15361 905 aaPredicted RBP3.19□□□□□ -1.9
SCARNA4-201ENST00000629045 LY6G5CQ5SRR4 150 aa3.19□□□□□ -1.9
SCARNA4-201ENST00000629045 B3GNTL1Q67FW5 361 aaPredicted RBP3.19□□□□□ -1.9
SCARNA4-201ENST00000629045 RAVER1Q8IY67 606 aaKnown RBP3.19□□□□□ -1.9
SCARNA4-201ENST00000629045 CPA6Q8N4T0 437 aa3.19□□□□□ -1.9
SCARNA4-201ENST00000629045 BEND2Q8NDZ0 799 aa3.19□□□□□ -1.9
SCARNA4-201ENST00000629045 ASB10Q8WXI3 467 aa3.19□□□□□ -1.9
SCARNA4-201ENST00000629045 RNF31Q96EP0 1072 aa3.19□□□□□ -1.9
SCARNA4-201ENST00000629045 MARS2Q96GW9 593 aaKnown RBP3.19□□□□□ -1.9
SCARNA4-201ENST00000629045 TTPALQ9BTX7 342 aa3.19□□□□□ -1.9
SCARNA4-201ENST00000629045 TLR10Q9BXR5 811 aa3.19□□□□□ -1.9
SCARNA4-201ENST00000629045 WDR11Q9BZH6 1224 aa3.19□□□□□ -1.9
SCARNA4-201ENST00000629045 REXO4Q9GZR2 422 aaKnown RBP3.19□□□□□ -1.9
SCARNA4-201ENST00000629045 IKZF4Q9H2S9 585 aa3.19□□□□□ -1.9
SCARNA4-201ENST00000629045 RNPEPQ9H4A4 650 aa3.19□□□□□ -1.9
SCARNA4-201ENST00000629045 HSFX1Q9UBD0 423 aa3.19□□□□□ -1.9
SCARNA4-201ENST00000629045 CDYLQ9Y232 598 aa3.19□□□□□ -1.9
SCARNA4-201ENST00000629045 SPEF1Q9Y4P9 236 aa3.19□□□□□ -1.9
SCARNA4-201ENST00000629045 TMEM200CA6NKL6 621 aa3.18□□□□□ -1.9
SCARNA4-201ENST00000629045 CDKL5O76039 1030 aa3.18□□□□□ -1.9
SCARNA4-201ENST00000629045 ABLIM3O94929 683 aa3.18□□□□□ -1.9
SCARNA4-201ENST00000629045 AGFG2O95081 481 aa3.18□□□□□ -1.9
SCARNA4-201ENST00000629045 CXADRP78310 365 aa3.18□□□□□ -1.9
SCARNA4-201ENST00000629045 GUCY1B3Q02153 619 aa3.18□□□□□ -1.9
SCARNA4-201ENST00000629045 MCL1Q07820 350 aa3.18□□□□□ -1.9
SCARNA4-201ENST00000629045 RAB39AQ14964 217 aa3.18□□□□□ -1.9
SCARNA4-201ENST00000629045 PTPAQ15257 358 aa3.18□□□□□ -1.9
SCARNA4-201ENST00000629045 ATP2B3Q16720 1220 aa3.18□□□□□ -1.9
SCARNA4-201ENST00000629045 GEN1Q17RS7 908 aa3.18□□□□□ -1.9
SCARNA4-201ENST00000629045 KHDC1Q4VXA5 237 aaKnown RBP3.18□□□□□ -1.9
SCARNA4-201ENST00000629045 PABPC1LQ4VXU2 614 aaKnown RBP3.18□□□□□ -1.9
SCARNA4-201ENST00000629045 SLC4A10Q6U841 1118 aa3.18□□□□□ -1.9
SCARNA4-201ENST00000629045 PCSK4Q6UW60 755 aa3.18□□□□□ -1.9
SCARNA4-201ENST00000629045 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.18□□□□□ -1.9
SCARNA4-201ENST00000629045 FITM2Q8N6M3 262 aa3.18□□□□□ -1.9
SCARNA4-201ENST00000629045 AMER2Q8N7J2 671 aa3.18□□□□□ -1.9
SCARNA4-201ENST00000629045 TMIEQ8NEW7 156 aa3.18□□□□□ -1.9
SCARNA4-201ENST00000629045 CHFRQ96EP1 664 aa3.18□□□□□ -1.9
SCARNA4-201ENST00000629045 HSPBAP1Q96EW2 488 aa3.18□□□□□ -1.9
SCARNA4-201ENST00000629045 PACSIN1Q9BY11 444 aa3.18□□□□□ -1.9
SCARNA4-201ENST00000629045 RTFDC1Q9BY42 306 aaPredicted RBP3.18□□□□□ -1.9
SCARNA4-201ENST00000629045 ALOXE3Q9BYJ1 711 aa3.18□□□□□ -1.9
SCARNA4-201ENST00000629045 GTPBP4Q9BZE4 634 aaKnown RBP3.18□□□□□ -1.9
SCARNA4-201ENST00000629045 SERHL2Q9H4I8 314 aa3.18□□□□□ -1.9
SCARNA4-201ENST00000629045 TYW1Q9NV66 732 aaKnown RBP3.18□□□□□ -1.9
SCARNA4-201ENST00000629045 VSX1Q9NZR4 365 aaPredicted RBP3.18□□□□□ -1.9
SCARNA4-201ENST00000629045 DKK2Q9UBU2 259 aa3.18□□□□□ -1.9
SCARNA4-201ENST00000629045 CFAP20Q9Y6A4 193 aaKnown RBP3.18□□□□□ -1.9
SCARNA4-201ENST00000629045 NT5C1B-RDH14C9J2C7 533 aa3.17□□□□□ -1.9
SCARNA4-201ENST00000629045 F2RL2O00254 374 aa3.17□□□□□ -1.9
SCARNA4-201ENST00000629045 AKAP10O43572 662 aa3.17□□□□□ -1.9
SCARNA4-201ENST00000629045 DTNBO60941 627 aa3.17□□□□□ -1.9
SCARNA4-201ENST00000629045 ERN1O75460 977 aaKnown RBP3.17□□□□□ -1.9
SCARNA4-201ENST00000629045 GPANK1O95872 356 aa3.17□□□□□ -1.9
SCARNA4-201ENST00000629045 HLA-DOAP06340 250 aa3.17□□□□□ -1.9
SCARNA4-201ENST00000629045 ITGAMP11215 1152 aa3.17□□□□□ -1.9
SCARNA4-201ENST00000629045 MTHFD1P11586 935 aaKnown RBP3.17□□□□□ -1.9
SCARNA4-201ENST00000629045 NCLP19338 710 aaKnown RBP3.17□□□□□ -1.9
SCARNA4-201ENST00000629045 PDCP20941 246 aa3.17□□□□□ -1.9
SCARNA4-201ENST00000629045 MALP21145 153 aa3.17□□□□□ -1.9
SCARNA4-201ENST00000629045 BMPR1AP36894 532 aa3.17□□□□□ -1.9
SCARNA4-201ENST00000629045 ZEB1P37275 1124 aaPredicted RBP3.17□□□□□ -1.9
SCARNA4-201ENST00000629045 PHKA1P46020 1223 aa3.17□□□□□ -1.9
SCARNA4-201ENST00000629045 MC2RQ01718 297 aa3.17□□□□□ -1.9
SCARNA4-201ENST00000629045 SCAPQ12770 1279 aa3.17□□□□□ -1.9
SCARNA4-201ENST00000629045 SNAPC2Q13487 334 aa3.17□□□□□ -1.9
SCARNA4-201ENST00000629045 PIN1Q13526 163 aaPredicted RBP3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms