RNA–Protein interactions for RNA: ENST00000629036.2

DDX41-219, Transcript of DEAD-box helicase 41, humanhuman

TSL 4 BASIC

Gene DDX41, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-219ENST00000629036 LRPAP1P30533 357 aa12.1□□□□□ -0.47
DDX41-219ENST00000629036 ACOT2P49753 483 aa12.1□□□□□ -0.47
DDX41-219ENST00000629036 DPYDQ12882 1025 aa12.1□□□□□ -0.47
DDX41-219ENST00000629036 SYCE2Q6PIF2 218 aa12.1□□□□□ -0.47
DDX41-219ENST00000629036 KRBA2Q6ZNG9 492 aa12.1□□□□□ -0.47
DDX41-219ENST00000629036 EP400NLQ6ZTU2 488 aa12.1□□□□□ -0.47
DDX41-219ENST00000629036 EFCAB13Q8IY85 973 aa12.1□□□□□ -0.47
DDX41-219ENST00000629036 GPR65Q8IYL9 337 aa12.1□□□□□ -0.47
DDX41-219ENST00000629036 TMEM87AQ8NBN3 555 aa12.1□□□□□ -0.47
DDX41-219ENST00000629036 SMRP1Q8NCR6 262 aa12.1□□□□□ -0.47
DDX41-219ENST00000629036 ACCSQ96QU6 501 aa12.1□□□□□ -0.47
DDX41-219ENST00000629036 PYM1Q9BRP8 204 aaKnown RBP12.1□□□□□ -0.47
DDX41-219ENST00000629036 MSTO1Q9BUK6 570 aa12.1□□□□□ -0.47
DDX41-219ENST00000629036 LRRC27Q9C0I9 530 aa12.1□□□□□ -0.47
DDX41-219ENST00000629036 GZF1Q9H116 711 aaPredicted RBP12.1□□□□□ -0.47
DDX41-219ENST00000629036 PLEKHA5Q9HAU0 1116 aa12.1□□□□□ -0.47
DDX41-219ENST00000629036 AGO2Q9UKV8 859 aaKnown RBP12.1□□□□□ -0.47
DDX41-219ENST00000629036 KMT2EQ8IZD2 1858 aa12.1□□□□□ -0.47
DDX41-219ENST00000629036 TECTAO75443 2155 aa12.09□□□□□ -0.47
DDX41-219ENST00000629036 MYO10Q9HD67 2058 aa12.09□□□□□ -0.47
DDX41-219ENST00000629036 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.09□□□□□ -0.47
DDX41-219ENST00000629036 CXCL14O95715 111 aa12.09□□□□□ -0.47
DDX41-219ENST00000629036 NFICP08651 508 aa12.09□□□□□ -0.47
DDX41-219ENST00000629036 GARTP22102 1010 aa12.09□□□□□ -0.47
DDX41-219ENST00000629036 FGFR3P22607 806 aa12.09□□□□□ -0.47
DDX41-219ENST00000629036 AARSP49588 968 aaKnown RBP eCLIP12.09□□□□□ -0.474e-6■■□□□ 13.1
DDX41-219ENST00000629036 CLCN4P51793 760 aa12.09□□□□□ -0.47
DDX41-219ENST00000629036 GUCY2FP51841 1108 aa12.09□□□□□ -0.47
DDX41-219ENST00000629036 YARSP54577 528 aaKnown RBP12.09□□□□□ -0.47
DDX41-219ENST00000629036 AMPD3Q01432 767 aa12.09□□□□□ -0.47
DDX41-219ENST00000629036 POU5F1Q01860 360 aaKnown RBP12.09□□□□□ -0.47
DDX41-219ENST00000629036 SPAG1Q07617 926 aa12.09□□□□□ -0.47
DDX41-219ENST00000629036 STK4Q13043 487 aa12.09□□□□□ -0.47
DDX41-219ENST00000629036 SCARA3Q6AZY7 606 aa12.09□□□□□ -0.47
DDX41-219ENST00000629036 CXorf38Q8TB03 319 aa12.09□□□□□ -0.47
DDX41-219ENST00000629036 SUSD6Q92537 303 aa12.09□□□□□ -0.47
DDX41-219ENST00000629036 UROC1Q96N76 676 aa12.09□□□□□ -0.47
DDX41-219ENST00000629036 KLHL5Q96PQ7 755 aa12.09□□□□□ -0.47
DDX41-219ENST00000629036 COLEC11Q9BWP8 271 aa12.09□□□□□ -0.47
DDX41-219ENST00000629036 S1PR5Q9H228 398 aa12.09□□□□□ -0.47
DDX41-219ENST00000629036 IGFLR1Q9H665 355 aa12.09□□□□□ -0.47
DDX41-219ENST00000629036 STK39Q9UEW8 545 aa12.09□□□□□ -0.47
DDX41-219ENST00000629036 PCDHB13Q9Y5F0 798 aa12.09□□□□□ -0.47
DDX41-219ENST00000629036 DENND4CQ5VZ89 1909 aa12.09□□□□□ -0.47
DDX41-219ENST00000629036 SF3B1O75533 1304 aaKnown RBP eCLIP12.09□□□□□ -0.47
DDX41-219ENST00000629036 PTPRJQ12913 1337 aa12.09□□□□□ -0.47
DDX41-219ENST00000629036 OBSL1O75147 1896 aa12.08□□□□□ -0.48
DDX41-219ENST00000629036 ZFHX2Q9C0A1 2572 aaPredicted RBP12.08□□□□□ -0.48
DDX41-219ENST00000629036 I3L4J1 428 aa12.08□□□□□ -0.48
DDX41-219ENST00000629036 PODXLO00592 558 aa12.08□□□□□ -0.48
DDX41-219ENST00000629036 TEX28O15482 410 aa12.08□□□□□ -0.48
DDX41-219ENST00000629036 ADAM12O43184 909 aa12.08□□□□□ -0.48
DDX41-219ENST00000629036 MBTPS2O43462 519 aa12.08□□□□□ -0.48
DDX41-219ENST00000629036 TBC1D4O60343 1298 aa12.08□□□□□ -0.48
DDX41-219ENST00000629036 GADD45BO75293 160 aaPredicted RBP12.08□□□□□ -0.48
DDX41-219ENST00000629036 ZNF202O95125 648 aa12.08□□□□□ -0.48
DDX41-219ENST00000629036 MYL1P05976 194 aa12.08□□□□□ -0.48
DDX41-219ENST00000629036 EPCAMP16422 314 aa12.08□□□□□ -0.48
DDX41-219ENST00000629036 GLUD2P49448 558 aa12.08□□□□□ -0.48
DDX41-219ENST00000629036 KYAT1Q16773 422 aa12.08□□□□□ -0.48
DDX41-219ENST00000629036 KMT5BQ4FZB7 885 aa12.08□□□□□ -0.48
DDX41-219ENST00000629036 SPATA1Q5VX52 437 aa12.08□□□□□ -0.48
DDX41-219ENST00000629036 JADE1Q6IE81 842 aa12.08□□□□□ -0.48
DDX41-219ENST00000629036 SLFN12LQ6IEE8 588 aa12.08□□□□□ -0.48
DDX41-219ENST00000629036 DCLRE1AQ6PJP8 1040 aa12.08□□□□□ -0.48
DDX41-219ENST00000629036 RSPO2Q6UXX9 243 aaPredicted RBP12.08□□□□□ -0.48
DDX41-219ENST00000629036 BRSK2Q8IWQ3 736 aa12.08□□□□□ -0.48
DDX41-219ENST00000629036 CEP57L1Q8IYX8 460 aa12.08□□□□□ -0.48
DDX41-219ENST00000629036 PRSS33Q8NF86 280 aa12.08□□□□□ -0.48
DDX41-219ENST00000629036 LNX1Q8TBB1 728 aaPredicted RBP12.08□□□□□ -0.48
DDX41-219ENST00000629036 MICAL1Q8TDZ2 1067 aa12.08□□□□□ -0.48
DDX41-219ENST00000629036 PIK3R5Q8WYR1 880 aa12.08□□□□□ -0.48
DDX41-219ENST00000629036 FAM84AQ96KN4 292 aa12.08□□□□□ -0.48
DDX41-219ENST00000629036 MFSD14AQ96MC6 490 aa12.08□□□□□ -0.48
DDX41-219ENST00000629036 KCTD10Q9H3F6 313 aa12.08□□□□□ -0.48
DDX41-219ENST00000629036 SLC39A2Q9NP94 309 aa12.08□□□□□ -0.48
DDX41-219ENST00000629036 SLC38A7Q9NVC3 462 aa12.08□□□□□ -0.48
DDX41-219ENST00000629036 CDH22Q9UJ99 828 aa12.08□□□□□ -0.48
DDX41-219ENST00000629036 GREB1Q4ZG55 1949 aa12.07□□□□□ -0.48
DDX41-219ENST00000629036 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.07□□□□□ -0.48
DDX41-219ENST00000629036 ANO9A1A5B4 782 aa12.07□□□□□ -0.48
DDX41-219ENST00000629036 FSD2A1L4K1 749 aa12.07□□□□□ -0.48
DDX41-219ENST00000629036 RHOBTB3O94955 611 aa12.07□□□□□ -0.48
DDX41-219ENST00000629036 URODP06132 367 aa12.07□□□□□ -0.48
DDX41-219ENST00000629036 CYP3A5P20815 502 aa12.07□□□□□ -0.48
DDX41-219ENST00000629036 TKTP29401 623 aaKnown RBP12.07□□□□□ -0.48
DDX41-219ENST00000629036 BRCC3P46736 316 aa12.07□□□□□ -0.48
DDX41-219ENST00000629036 PPP2R3AQ06190 1150 aa12.07□□□□□ -0.48
DDX41-219ENST00000629036 SMAD4Q13485 552 aaKnown RBP12.07□□□□□ -0.48
DDX41-219ENST00000629036 SMAD2Q15796 467 aaKnown RBP12.07□□□□□ -0.48
DDX41-219ENST00000629036 CLUL1Q15846 466 aa12.07□□□□□ -0.48
DDX41-219ENST00000629036 USP41Q3LFD5 358 aa12.07□□□□□ -0.48
DDX41-219ENST00000629036 ANKRD54Q6NXT1 300 aa12.07□□□□□ -0.48
DDX41-219ENST00000629036 LILRA6Q6PI73 481 aa12.07□□□□□ -0.48
DDX41-219ENST00000629036 PRSS55Q6UWB4 352 aaPredicted RBP12.07□□□□□ -0.48
DDX41-219ENST00000629036 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.07□□□□□ -0.48
DDX41-219ENST00000629036 C12orf56Q8IXR9 622 aa12.07□□□□□ -0.48
DDX41-219ENST00000629036 SPATA20Q8TB22 786 aa12.07□□□□□ -0.48
DDX41-219ENST00000629036 TMEM174Q8WUU8 243 aa12.07□□□□□ -0.48
DDX41-219ENST00000629036 POMGNT1Q8WZA1 660 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms