RNA–Protein interactions for RNA: ENST00000628124.2

GABRB3-216, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2 BASIC

Gene GABRB3, Length 5,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-216ENST00000628124 ADAM21Q9UKJ8 722 aa9.37□□□□□ -0.91
GABRB3-216ENST00000628124 TMCC3Q9ULS5 477 aa9.37□□□□□ -0.91
GABRB3-216ENST00000628124 UHRF1BP1Q6BDS2 1440 aa9.37□□□□□ -0.91
GABRB3-216ENST00000628124 IFNA14P01570 189 aa9.37□□□□□ -0.91
GABRB3-216ENST00000628124 ENO3P13929 434 aaPredicted RBP9.37□□□□□ -0.91
GABRB3-216ENST00000628124 MAPK1P28482 360 aa9.37□□□□□ -0.91
GABRB3-216ENST00000628124 PRIM2P49643 509 aa9.37□□□□□ -0.91
GABRB3-216ENST00000628124 ALDH18A1P54886 795 aaKnown RBP9.37□□□□□ -0.91
GABRB3-216ENST00000628124 BYSLQ13895 437 aaKnown RBP9.37□□□□□ -0.91
GABRB3-216ENST00000628124 USP10Q14694 798 aaKnown RBP9.37□□□□□ -0.91
GABRB3-216ENST00000628124 TRIM16LQ309B1 348 aa9.37□□□□□ -0.91
GABRB3-216ENST00000628124 DALRD3Q5D0E6 543 aaKnown RBP9.37□□□□□ -0.91
GABRB3-216ENST00000628124 KLHL24Q6TFL4 600 aa9.37□□□□□ -0.91
GABRB3-216ENST00000628124 C11orf57Q6ZUT1 292 aaPredicted RBP9.37□□□□□ -0.91
GABRB3-216ENST00000628124 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.37□□□□□ -0.91
GABRB3-216ENST00000628124 RCOR2Q8IZ40 523 aa9.37□□□□□ -0.91
GABRB3-216ENST00000628124 RFFLQ8WZ73 363 aa9.37□□□□□ -0.91
GABRB3-216ENST00000628124 TIPINQ9BVW5 301 aa9.37□□□□□ -0.91
GABRB3-216ENST00000628124 EPN3Q9H201 632 aa9.37□□□□□ -0.91
GABRB3-216ENST00000628124 TRABDQ9H4I3 376 aa9.37□□□□□ -0.91
GABRB3-216ENST00000628124 FAM217BQ9NTX9 383 aaPredicted RBP9.37□□□□□ -0.91
GABRB3-216ENST00000628124 ERAP1Q9NZ08 941 aa9.37□□□□□ -0.91
GABRB3-216ENST00000628124 RPS6KB2Q9UBS0 482 aa9.37□□□□□ -0.91
GABRB3-216ENST00000628124 CDY2AQ9Y6F7 541 aa9.37□□□□□ -0.91
GABRB3-216ENST00000628124 CDY1Q9Y6F8 540 aa9.37□□□□□ -0.91
GABRB3-216ENST00000628124 HEATR9A2RTY3 570 aa9.36□□□□□ -0.91
GABRB3-216ENST00000628124 ASB14A6NK59 587 aa9.36□□□□□ -0.91
GABRB3-216ENST00000628124 EPB42P16452 691 aa9.36□□□□□ -0.91
GABRB3-216ENST00000628124 KRT20P35900 424 aa9.36□□□□□ -0.91
GABRB3-216ENST00000628124 PKN2Q16513 984 aaKnown RBP9.36□□□□□ -0.91
GABRB3-216ENST00000628124 UBE2SQ16763 222 aa9.36□□□□□ -0.91
GABRB3-216ENST00000628124 NEK10Q6ZWH5 1172 aa9.36□□□□□ -0.91
GABRB3-216ENST00000628124 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.36□□□□□ -0.91
GABRB3-216ENST00000628124 SH3GL1Q99961 368 aa9.36□□□□□ -0.91
GABRB3-216ENST00000628124 PCDHA6Q9UN73 950 aa9.36□□□□□ -0.91
GABRB3-216ENST00000628124 PCDHA8Q9Y5H6 950 aa9.36□□□□□ -0.91
GABRB3-216ENST00000628124 E7ENQ6 273 aa9.36□□□□□ -0.91
GABRB3-216ENST00000628124 PGK2P07205 417 aa9.36□□□□□ -0.91
GABRB3-216ENST00000628124 QARSP47897 775 aaKnown RBP9.36□□□□□ -0.91
GABRB3-216ENST00000628124 ARSEP51690 589 aa9.36□□□□□ -0.91
GABRB3-216ENST00000628124 CSE1LP55060 971 aaKnown RBP9.36□□□□□ -0.91
GABRB3-216ENST00000628124 HNRNPH2P55795 449 aaKnown RBP9.36□□□□□ -0.91
GABRB3-216ENST00000628124 IRAK1BP1Q5VVH5 260 aa9.36□□□□□ -0.91
GABRB3-216ENST00000628124 SLC30A9Q6PML9 568 aa9.36□□□□□ -0.91
GABRB3-216ENST00000628124 GPD1LQ8N335 351 aa9.36□□□□□ -0.91
GABRB3-216ENST00000628124 CAMKK2Q96RR4 588 aa9.36□□□□□ -0.91
GABRB3-216ENST00000628124 INTS2Q9H0H0 1204 aaKnown RBP9.36□□□□□ -0.91
GABRB3-216ENST00000628124 NDUFA13Q9P0J0 144 aa9.36□□□□□ -0.91
GABRB3-216ENST00000628124 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.36□□□□□ -0.91
GABRB3-216ENST00000628124 YEATS2Q9ULM3 1422 aa9.36□□□□□ -0.91
GABRB3-216ENST00000628124 ABCC4O15439 1325 aa9.36□□□□□ -0.91
GABRB3-216ENST00000628124 UBN2Q6ZU65 1347 aa9.36□□□□□ -0.91
GABRB3-216ENST00000628124 PITPNM2Q9BZ72 1349 aa9.36□□□□□ -0.91
GABRB3-216ENST00000628124 TRPC5OSA6NMA1 111 aa9.36□□□□□ -0.91
GABRB3-216ENST00000628124 CENPXA8MT69 81 aa9.36□□□□□ -0.91
GABRB3-216ENST00000628124 ENO1P06733 434 aaKnown RBP9.36□□□□□ -0.91
GABRB3-216ENST00000628124 KNOP1Q1ED39 458 aaKnown RBP9.36□□□□□ -0.91
GABRB3-216ENST00000628124 USP17L2Q6R6M4 530 aa9.36□□□□□ -0.91
GABRB3-216ENST00000628124 SFR1Q86XK3 245 aa9.36□□□□□ -0.91
GABRB3-216ENST00000628124 MICALL2Q8IY33 904 aa9.36□□□□□ -0.91
GABRB3-216ENST00000628124 MMGT1Q8N4V1 131 aa9.36□□□□□ -0.91
GABRB3-216ENST00000628124 ZNF579Q8NAF0 562 aaKnown RBP9.36□□□□□ -0.91
GABRB3-216ENST00000628124 DDHD1Q8NEL9 900 aa9.36□□□□□ -0.91
GABRB3-216ENST00000628124 ZNF507Q8TCN5 953 aa9.36□□□□□ -0.91
GABRB3-216ENST00000628124 VPS33BQ9H267 617 aa9.36□□□□□ -0.91
GABRB3-216ENST00000628124 GALNT8Q9NY28 637 aa9.36□□□□□ -0.91
GABRB3-216ENST00000628124 SPASTQ9UBP0 616 aa9.36□□□□□ -0.91
GABRB3-216ENST00000628124 MTO1Q9Y2Z2 717 aaKnown RBP9.36□□□□□ -0.91
GABRB3-216ENST00000628124 ARHGAP31Q2M1Z3 1444 aa9.36□□□□□ -0.91
GABRB3-216ENST00000628124 NCKAP5LQ9HCH0 1330 aa9.36□□□□□ -0.91
GABRB3-216ENST00000628124 NPC1L1Q9UHC9 1359 aa9.36□□□□□ -0.91
GABRB3-216ENST00000628124 PEX1O43933 1283 aa9.36□□□□□ -0.91
GABRB3-216ENST00000628124 SOAT2O75908 522 aa9.36□□□□□ -0.91
GABRB3-216ENST00000628124 USP1O94782 785 aa9.36□□□□□ -0.91
GABRB3-216ENST00000628124 FTLP02792 175 aaPredicted RBP9.36□□□□□ -0.91
GABRB3-216ENST00000628124 GGCXP38435 758 aa9.36□□□□□ -0.91
GABRB3-216ENST00000628124 GRIK1P39086 918 aa9.36□□□□□ -0.91
GABRB3-216ENST00000628124 KDSRQ06136 332 aa9.36□□□□□ -0.91
GABRB3-216ENST00000628124 KCNH2Q12809 1159 aa9.36□□□□□ -0.91
GABRB3-216ENST00000628124 NCAPHQ15003 741 aa9.36□□□□□ -0.91
GABRB3-216ENST00000628124 IKBIPQ70UQ0 350 aa9.36□□□□□ -0.91
GABRB3-216ENST00000628124 GREM2Q9H772 168 aa9.36□□□□□ -0.91
GABRB3-216ENST00000628124 CATSPERBQ9H7T0 1116 aa9.36□□□□□ -0.91
GABRB3-216ENST00000628124 WDR41Q9HAD4 459 aa9.36□□□□□ -0.91
GABRB3-216ENST00000628124 RGS18Q9NS28 235 aa9.36□□□□□ -0.91
GABRB3-216ENST00000628124 KLC4Q9NSK0 619 aa9.36□□□□□ -0.91
GABRB3-216ENST00000628124 ZBTB5O15062 677 aa9.35□□□□□ -0.91
GABRB3-216ENST00000628124 CDH16O75309 829 aa9.35□□□□□ -0.91
GABRB3-216ENST00000628124 ITGAXP20702 1163 aa9.35□□□□□ -0.91
GABRB3-216ENST00000628124 PSMC5P62195 406 aa9.35□□□□□ -0.91
GABRB3-216ENST00000628124 SLC44A4Q53GD3 710 aa9.35□□□□□ -0.91
GABRB3-216ENST00000628124 FAM196AQ6ZSG2 479 aa9.35□□□□□ -0.91
GABRB3-216ENST00000628124 CCDC60Q8IWA6 550 aaPredicted RBP9.35□□□□□ -0.91
GABRB3-216ENST00000628124 RMND5AQ9H871 391 aa9.35□□□□□ -0.91
GABRB3-216ENST00000628124 ABHD10Q9NUJ1 306 aa9.35□□□□□ -0.91
GABRB3-216ENST00000628124 STAP2Q9UGK3 403 aa9.35□□□□□ -0.91
GABRB3-216ENST00000628124 LOC102724428A0A0B4J2F2 783 aa9.35□□□□□ -0.91
GABRB3-216ENST00000628124 PSMD14O00487 310 aa9.35□□□□□ -0.91
GABRB3-216ENST00000628124 TRIM24O15164 1050 aa9.35□□□□□ -0.91
GABRB3-216ENST00000628124 DLGAP3O95886 979 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms