RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 GLRA4Q5JXX5 417 aa15.97■□□□□ 0.15
PNKP-221ENST00000627317 CEP135Q66GS9 1140 aa15.97■□□□□ 0.15
PNKP-221ENST00000627317 SLC9A9Q8IVB4 645 aa15.97■□□□□ 0.15
PNKP-221ENST00000627317 BRSK2Q8IWQ3 736 aa15.97■□□□□ 0.15
PNKP-221ENST00000627317 GSTCDQ8NEC7 633 aa15.97■□□□□ 0.15
PNKP-221ENST00000627317 ZSWIM2Q8NEG5 633 aa15.97■□□□□ 0.15
PNKP-221ENST00000627317 TCF25Q9BQ70 676 aa15.97■□□□□ 0.15
PNKP-221ENST00000627317 CNTN3Q9P232 1028 aa15.97■□□□□ 0.15
PNKP-221ENST00000627317 C5orf42Q9H799 3197 aa15.97■□□□□ 0.15
PNKP-221ENST00000627317 TTC26A0AVF1 554 aa15.96■□□□□ 0.15
PNKP-221ENST00000627317 TRIM49BA6NDI0 452 aa15.96■□□□□ 0.15
PNKP-221ENST00000627317 HIDE1A8MVS5 230 aa15.96■□□□□ 0.15
PNKP-221ENST00000627317 LACTBL1A8MY62 500 aa15.96■□□□□ 0.15
PNKP-221ENST00000627317 NT5C1B-RDH14C9J2C7 533 aa15.96■□□□□ 0.15
PNKP-221ENST00000627317 TNFRSF10AO00220 468 aa15.96■□□□□ 0.15
PNKP-221ENST00000627317 LETM1O95202 739 aaPredicted RBP15.96■□□□□ 0.15
PNKP-221ENST00000627317 IL18RAPO95256 599 aa15.96■□□□□ 0.15
PNKP-221ENST00000627317 EFEMP2O95967 443 aa15.96■□□□□ 0.15
PNKP-221ENST00000627317 ALDH7A1P49419 539 aaKnown RBP15.96■□□□□ 0.15
PNKP-221ENST00000627317 SNRNP35Q16560 246 aaKnown RBP15.96■□□□□ 0.15
PNKP-221ENST00000627317 STX1AQ16623 288 aa15.96■□□□□ 0.15
PNKP-221ENST00000627317 DUSP6Q16828 381 aa15.96■□□□□ 0.15
PNKP-221ENST00000627317 PTCRAQ6ISU1 281 aaPredicted RBP15.96■□□□□ 0.15
PNKP-221ENST00000627317 CRELD2Q6UXH1 353 aaPredicted RBP15.96■□□□□ 0.15
PNKP-221ENST00000627317 CBWD2Q8IUF1 395 aa15.96■□□□□ 0.15
PNKP-221ENST00000627317 CD302Q8IX05 232 aa15.96■□□□□ 0.15
PNKP-221ENST00000627317 KIF12Q96FN5 646 aa15.96■□□□□ 0.15
PNKP-221ENST00000627317 IGSF21Q96ID5 467 aa15.96■□□□□ 0.15
PNKP-221ENST00000627317 NGRNQ9NPE2 291 aaKnown RBP15.96■□□□□ 0.15
PNKP-221ENST00000627317 SLC38A7Q9NVC3 462 aa15.96■□□□□ 0.15
PNKP-221ENST00000627317 DMAC2Q9NW81 257 aa15.96■□□□□ 0.15
PNKP-221ENST00000627317 FRMD4BQ9Y2L6 1034 aa15.96■□□□□ 0.15
PNKP-221ENST00000627317 TDRD15B5MCY1 1934 aaKnown RBP15.96■□□□□ 0.14
PNKP-221ENST00000627317 SMIM28A0A1B0GU29 152 aa15.95■□□□□ 0.14
PNKP-221ENST00000627317 CARNS1A5YM72 827 aa15.95■□□□□ 0.14
PNKP-221ENST00000627317 CETN3O15182 167 aa15.95■□□□□ 0.14
PNKP-221ENST00000627317 MEFVO15553 781 aaPredicted RBP15.95■□□□□ 0.14
PNKP-221ENST00000627317 XPOTO43592 962 aaKnown RBP15.95■□□□□ 0.14
PNKP-221ENST00000627317 ADRB2P07550 413 aa15.95■□□□□ 0.14
PNKP-221ENST00000627317 IL9P15248 144 aa15.95■□□□□ 0.14
PNKP-221ENST00000627317 KCNE1P15382 129 aa15.95■□□□□ 0.14
PNKP-221ENST00000627317 PMS1P54277 932 aaKnown RBP15.95■□□□□ 0.14
PNKP-221ENST00000627317 STX17P56962 302 aa15.95■□□□□ 0.14
PNKP-221ENST00000627317 RBM10P98175 930 aaKnown RBP15.95■□□□□ 0.14
PNKP-221ENST00000627317 KRT17Q04695 432 aa15.95■□□□□ 0.14
PNKP-221ENST00000627317 ADAM9Q13443 819 aa15.95■□□□□ 0.14
PNKP-221ENST00000627317 TMEM132DQ14C87 1099 aa15.95■□□□□ 0.14
PNKP-221ENST00000627317 PUS10Q3MIT2 529 aaKnown RBP15.95■□□□□ 0.14
PNKP-221ENST00000627317 XKR4Q5GH76 650 aa15.95■□□□□ 0.14
PNKP-221ENST00000627317 ANKRD40Q6AI12 368 aa15.95■□□□□ 0.14
PNKP-221ENST00000627317 ALKAL1Q6UXT8 129 aa15.95■□□□□ 0.14
PNKP-221ENST00000627317 DDX53Q86TM3 631 aaKnown RBP15.95■□□□□ 0.14
PNKP-221ENST00000627317 RDH13Q8NBN7 331 aa15.95■□□□□ 0.14
PNKP-221ENST00000627317 TMEM174Q8WUU8 243 aa15.95■□□□□ 0.14
PNKP-221ENST00000627317 PPP2R3CQ969Q6 453 aa15.95■□□□□ 0.14
PNKP-221ENST00000627317 FBXL18Q96ME1 805 aa15.95■□□□□ 0.14
PNKP-221ENST00000627317 CDCA3Q99618 268 aaPredicted RBP15.95■□□□□ 0.14
PNKP-221ENST00000627317 TMEM175Q9BSA9 504 aa15.95■□□□□ 0.14
PNKP-221ENST00000627317 ZBP1Q9H171 429 aa15.95■□□□□ 0.14
PNKP-221ENST00000627317 CXCL16Q9H2A7 254 aa15.95■□□□□ 0.14
PNKP-221ENST00000627317 ANO10Q9NW15 660 aa15.95■□□□□ 0.14
PNKP-221ENST00000627317 MARCH5Q9NX47 278 aa15.95■□□□□ 0.14
PNKP-221ENST00000627317 MIOSQ9NXC5 875 aa15.95■□□□□ 0.14
PNKP-221ENST00000627317 TRIP11Q15643 1979 aa15.95■□□□□ 0.14
PNKP-221ENST00000627317 C2orf71A6NGG8 1288 aa15.94■□□□□ 0.14
PNKP-221ENST00000627317 PER2O15055 1255 aa15.94■□□□□ 0.14
PNKP-221ENST00000627317 FKBP3Q00688 224 aaKnown RBP15.94■□□□□ 0.14
PNKP-221ENST00000627317 SPAG1Q07617 926 aa15.94■□□□□ 0.14
PNKP-221ENST00000627317 CYP24A1Q07973 514 aa15.94■□□□□ 0.14
PNKP-221ENST00000627317 TUSC3Q13454 348 aa15.94■□□□□ 0.14
PNKP-221ENST00000627317 SURF1Q15526 300 aa15.94■□□□□ 0.14
PNKP-221ENST00000627317 PLPP4Q5VZY2 271 aa15.94■□□□□ 0.14
PNKP-221ENST00000627317 JADE1Q6IE81 842 aa15.94■□□□□ 0.14
PNKP-221ENST00000627317 TTI2Q6NXR4 508 aa15.94■□□□□ 0.14
PNKP-221ENST00000627317 TMEM184AQ6ZMB5 413 aa15.94■□□□□ 0.14
PNKP-221ENST00000627317 RBM23Q86U06 439 aaKnown RBP15.94■□□□□ 0.14
PNKP-221ENST00000627317 COLGALT2Q8IYK4 626 aa15.94■□□□□ 0.14
PNKP-221ENST00000627317 MRPL43Q8N983 215 aaKnown RBP15.94■□□□□ 0.14
PNKP-221ENST00000627317 SMRP1Q8NCR6 262 aa15.94■□□□□ 0.14
PNKP-221ENST00000627317 ZMAT2Q96NC0 199 aaKnown RBP15.94■□□□□ 0.14
PNKP-221ENST00000627317 PPP1R10Q96QC0 940 aaKnown RBP15.94■□□□□ 0.14
PNKP-221ENST00000627317 TSPAN18Q96SJ8 248 aa15.94■□□□□ 0.14
PNKP-221ENST00000627317 IGFLR1Q9H665 355 aa15.94■□□□□ 0.14
PNKP-221ENST00000627317 ASB7Q9H672 318 aa15.94■□□□□ 0.14
PNKP-221ENST00000627317 TLE6Q9H808 572 aa15.94■□□□□ 0.14
PNKP-221ENST00000627317 CD320Q9NPF0 282 aa15.94■□□□□ 0.14
PNKP-221ENST00000627317 ENTPD7Q9NQZ7 604 aa15.94■□□□□ 0.14
PNKP-221ENST00000627317 PUF60Q9UHX1 559 aaKnown RBP15.94■□□□□ 0.14
PNKP-221ENST00000627317 RWDD2AQ9UIY3 292 aa15.94■□□□□ 0.14
PNKP-221ENST00000627317 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.94■□□□□ 0.14
PNKP-221ENST00000627317 IRAK3Q9Y616 596 aa15.94■□□□□ 0.14
PNKP-221ENST00000627317 CASTOR2A6NHX0 329 aa15.93■□□□□ 0.14
PNKP-221ENST00000627317 NFICP08651 508 aa15.93■□□□□ 0.14
PNKP-221ENST00000627317 EPB41P11171 864 aaKnown RBP15.93■□□□□ 0.14
PNKP-221ENST00000627317 OR1G1P47890 313 aa15.93■□□□□ 0.14
PNKP-221ENST00000627317 CASP4P49662 377 aa15.93■□□□□ 0.14
PNKP-221ENST00000627317 TYRO3Q06418 890 aa15.93■□□□□ 0.14
PNKP-221ENST00000627317 SMAD4Q13485 552 aaKnown RBP15.93■□□□□ 0.14
PNKP-221ENST00000627317 SMAD2Q15796 467 aaKnown RBP15.93■□□□□ 0.14
PNKP-221ENST00000627317 FOXR2Q6PJQ5 311 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms