RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 THPOP40225 353 aa8.12□□□□□ -1.11
PTP4A1-206ENST00000627002 KIF11P52732 1056 aa8.12□□□□□ -1.11
PTP4A1-206ENST00000627002 TFAMQ00059 246 aaKnown RBP8.12□□□□□ -1.11
PTP4A1-206ENST00000627002 ARID5AQ03989 594 aa8.12□□□□□ -1.11
PTP4A1-206ENST00000627002 MGAT3Q09327 533 aa8.12□□□□□ -1.11
PTP4A1-206ENST00000627002 TRPC3Q13507 836 aa8.12□□□□□ -1.11
PTP4A1-206ENST00000627002 NCOA4Q13772 614 aa8.12□□□□□ -1.11
PTP4A1-206ENST00000627002 ARHGAP44Q17R89 818 aa8.12□□□□□ -1.11
PTP4A1-206ENST00000627002 SGSM1Q2NKQ1 1148 aa8.12□□□□□ -1.11
PTP4A1-206ENST00000627002 ASTE1Q2TB18 679 aaPredicted RBP8.12□□□□□ -1.11
PTP4A1-206ENST00000627002 FAM26DQ5JW98 314 aa8.12□□□□□ -1.11
PTP4A1-206ENST00000627002 DNTTIP2Q5QJE6 756 aaKnown RBP8.12□□□□□ -1.11
PTP4A1-206ENST00000627002 C10orf76Q5T2E6 689 aa8.12□□□□□ -1.11
PTP4A1-206ENST00000627002 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.12□□□□□ -1.11
PTP4A1-206ENST00000627002 ZNF662Q6ZS27 426 aa8.12□□□□□ -1.11
PTP4A1-206ENST00000627002 NYAP1Q6ZVC0 841 aa8.12□□□□□ -1.11
PTP4A1-206ENST00000627002 TRAPPC11Q7Z392 1133 aa8.12□□□□□ -1.11
PTP4A1-206ENST00000627002 IRF2BP2Q7Z5L9 587 aa8.12□□□□□ -1.11
PTP4A1-206ENST00000627002 KIAA1328Q86T90 577 aa8.12□□□□□ -1.11
PTP4A1-206ENST00000627002 FAM228AQ86W67 206 aa8.12□□□□□ -1.11
PTP4A1-206ENST00000627002 ARHGEF19Q8IW93 802 aa8.12□□□□□ -1.11
PTP4A1-206ENST00000627002 HACE1Q8IYU2 909 aa8.12□□□□□ -1.11
PTP4A1-206ENST00000627002 CEP120Q8N960 986 aa8.12□□□□□ -1.11
PTP4A1-206ENST00000627002 USP38Q8NB14 1042 aa8.12□□□□□ -1.11
PTP4A1-206ENST00000627002 ACRBPQ8NEB7 543 aa8.12□□□□□ -1.11
PTP4A1-206ENST00000627002 OR5B17Q8NGF7 314 aa8.12□□□□□ -1.11
PTP4A1-206ENST00000627002 HELQQ8TDG4 1101 aa8.12□□□□□ -1.11
PTP4A1-206ENST00000627002 TMEM40Q8WWA1 233 aa8.12□□□□□ -1.11
PTP4A1-206ENST00000627002 DHX38Q92620 1227 aaKnown RBP8.12□□□□□ -1.11
PTP4A1-206ENST00000627002 TAF4BQ92750 862 aa8.12□□□□□ -1.11
PTP4A1-206ENST00000627002 FAXDC2Q96IV6 333 aa8.12□□□□□ -1.11
PTP4A1-206ENST00000627002 DESI2Q9BSY9 194 aa8.12□□□□□ -1.11
PTP4A1-206ENST00000627002 TSGA10Q9BZW7 698 aa8.12□□□□□ -1.11
PTP4A1-206ENST00000627002 MTMR12Q9C0I1 747 aa8.12□□□□□ -1.11
PTP4A1-206ENST00000627002 GPR88Q9GZN0 384 aa8.12□□□□□ -1.11
PTP4A1-206ENST00000627002 UNC93B1Q9H1C4 597 aa8.12□□□□□ -1.11
PTP4A1-206ENST00000627002 HAUS4Q9H6D7 363 aa8.12□□□□□ -1.11
PTP4A1-206ENST00000627002 PAK6Q9NQU5 681 aaPredicted RBP8.12□□□□□ -1.11
PTP4A1-206ENST00000627002 STARD7Q9NQZ5 370 aa8.12□□□□□ -1.11
PTP4A1-206ENST00000627002 AJAP1Q9UKB5 411 aaPredicted RBP8.12□□□□□ -1.11
PTP4A1-206ENST00000627002 C2CD2Q9Y426 696 aa8.12□□□□□ -1.11
PTP4A1-206ENST00000627002 SQORQ9Y6N5 450 aa8.12□□□□□ -1.11
PTP4A1-206ENST00000627002 PDE4DIPQ5VU43 2346 aa8.11□□□□□ -1.11
PTP4A1-206ENST00000627002 ARVCFO00192 962 aa8.11□□□□□ -1.11
PTP4A1-206ENST00000627002 FOXN3O00409 490 aaPredicted RBP8.11□□□□□ -1.11
PTP4A1-206ENST00000627002 KRT86O43790 486 aa8.11□□□□□ -1.11
PTP4A1-206ENST00000627002 CHRNA1P02708 482 aa8.11□□□□□ -1.11
PTP4A1-206ENST00000627002 PLEKP08567 350 aaPredicted RBP8.11□□□□□ -1.11
PTP4A1-206ENST00000627002 CCL5P13501 91 aa8.11□□□□□ -1.11
PTP4A1-206ENST00000627002 TNNT1P13805 278 aa8.11□□□□□ -1.11
PTP4A1-206ENST00000627002 ATICP31939 592 aa8.11□□□□□ -1.11
PTP4A1-206ENST00000627002 NOP14P78316 857 aaKnown RBP8.11□□□□□ -1.11
PTP4A1-206ENST00000627002 PTK2Q05397 1052 aa8.11□□□□□ -1.11
PTP4A1-206ENST00000627002 BMS1Q14692 1282 aaKnown RBP8.11□□□□□ -1.11
PTP4A1-206ENST00000627002 TMEM132DQ14C87 1099 aa8.11□□□□□ -1.11
PTP4A1-206ENST00000627002 SLC18A3Q16572 532 aa8.11□□□□□ -1.11
PTP4A1-206ENST00000627002 SLC10A6Q3KNW5 377 aa8.11□□□□□ -1.11
PTP4A1-206ENST00000627002 ARHGAP29Q52LW3 1261 aa8.11□□□□□ -1.11
PTP4A1-206ENST00000627002 JADE1Q6IE81 842 aa8.11□□□□□ -1.11
PTP4A1-206ENST00000627002 EFCAB13Q8IY85 973 aa8.11□□□□□ -1.11
PTP4A1-206ENST00000627002 TMEM192Q8IY95 271 aa8.11□□□□□ -1.11
PTP4A1-206ENST00000627002 FAM71AQ8IYT1 594 aa8.11□□□□□ -1.11
PTP4A1-206ENST00000627002 SHC3Q92529 594 aa8.11□□□□□ -1.11
PTP4A1-206ENST00000627002 SNX27Q96L92 541 aa8.11□□□□□ -1.11
PTP4A1-206ENST00000627002 C16orf45Q96MC5 204 aaPredicted RBP8.11□□□□□ -1.11
PTP4A1-206ENST00000627002 PI4K2AQ9BTU6 479 aa8.11□□□□□ -1.11
PTP4A1-206ENST00000627002 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.11□□□□□ -1.11
PTP4A1-206ENST00000627002 EIF2AQ9BY44 585 aaKnown RBP8.11□□□□□ -1.11
PTP4A1-206ENST00000627002 IFIH1Q9BYX4 1025 aaKnown RBP8.11□□□□□ -1.11
PTP4A1-206ENST00000627002 RNF208Q9H0X6 261 aa8.11□□□□□ -1.11
PTP4A1-206ENST00000627002 TRMT13Q9NUP7 481 aaKnown RBP8.11□□□□□ -1.11
PTP4A1-206ENST00000627002 ITGA11Q9UKX5 1188 aa8.11□□□□□ -1.11
PTP4A1-206ENST00000627002 ST3GAL5Q9UNP4 418 aa8.11□□□□□ -1.11
PTP4A1-206ENST00000627002 R3HCC1Q9Y3T6 440 aaKnown RBP8.11□□□□□ -1.11
PTP4A1-206ENST00000627002 NOC2LQ9Y3T9 749 aaKnown RBP8.11□□□□□ -1.11
PTP4A1-206ENST00000627002 ATP8B3O60423 1300 aa8.1□□□□□ -1.11
PTP4A1-206ENST00000627002 SCN10AQ9Y5Y9 1956 aa8.1□□□□□ -1.11
PTP4A1-206ENST00000627002 XPOTO43592 962 aaKnown RBP8.1□□□□□ -1.11
PTP4A1-206ENST00000627002 KIF5CO60282 957 aa8.1□□□□□ -1.11
PTP4A1-206ENST00000627002 LRRN2O75325 713 aa8.1□□□□□ -1.11
PTP4A1-206ENST00000627002 CLSTN1O94985 981 aa8.1□□□□□ -1.11
PTP4A1-206ENST00000627002 ASS1P00966 412 aaKnown RBP8.1□□□□□ -1.11
PTP4A1-206ENST00000627002 NFICP08651 508 aa8.1□□□□□ -1.11
PTP4A1-206ENST00000627002 CTSHP09668 335 aa8.1□□□□□ -1.11
PTP4A1-206ENST00000627002 P4HA1P13674 534 aa8.1□□□□□ -1.11
PTP4A1-206ENST00000627002 ZSCAN20P17040 1043 aaPredicted RBP8.1□□□□□ -1.11
PTP4A1-206ENST00000627002 USP8P40818 1118 aa8.1□□□□□ -1.11
PTP4A1-206ENST00000627002 MAGEA1P43355 309 aa8.1□□□□□ -1.11
PTP4A1-206ENST00000627002 RAB27AP51159 221 aa8.1□□□□□ -1.11
PTP4A1-206ENST00000627002 VAV2P52735 878 aa8.1□□□□□ -1.11
PTP4A1-206ENST00000627002 BPIFB4P59827 614 aa8.1□□□□□ -1.11
PTP4A1-206ENST00000627002 MYL6P60660 151 aa8.1□□□□□ -1.11
PTP4A1-206ENST00000627002 YWHAEP62258 255 aaKnown RBP8.1□□□□□ -1.11
PTP4A1-206ENST00000627002 RBP5P82980 135 aa8.1□□□□□ -1.11
PTP4A1-206ENST00000627002 KIF5AQ12840 1032 aa8.1□□□□□ -1.11
PTP4A1-206ENST00000627002 PAK2Q13177 524 aa8.1□□□□□ -1.11
PTP4A1-206ENST00000627002 CUL2Q13617 745 aa8.1□□□□□ -1.11
PTP4A1-206ENST00000627002 TRIM71Q2Q1W2 868 aaKnown RBP8.1□□□□□ -1.11
PTP4A1-206ENST00000627002 ZNF699Q32M78 642 aa8.1□□□□□ -1.11
PTP4A1-206ENST00000627002 FBXO47Q5MNV8 452 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms