RNA–Protein interactions for RNA: ENST00000626236.2

SGMS1-211, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-211ENST00000626236 GCLMP48507 274 aa9.21□□□□□ -0.94
SGMS1-211ENST00000626236 FOXK1P85037 733 aa9.21□□□□□ -0.94
SGMS1-211ENST00000626236 RNASELQ05823 741 aaKnown RBP9.21□□□□□ -0.94
SGMS1-211ENST00000626236 ENPEPQ07075 957 aa9.21□□□□□ -0.94
SGMS1-211ENST00000626236 GRIK3Q13003 919 aa9.21□□□□□ -0.94
SGMS1-211ENST00000626236 KRT31Q15323 416 aa9.21□□□□□ -0.94
SGMS1-211ENST00000626236 MAN2A1Q16706 1144 aa9.21□□□□□ -0.94
SGMS1-211ENST00000626236 DUOXA2Q1HG44 320 aa9.21□□□□□ -0.94
SGMS1-211ENST00000626236 C1orf220Q5T0J3 134 aa9.21□□□□□ -0.94
SGMS1-211ENST00000626236 HERC6Q8IVU3 1022 aa9.21□□□□□ -0.94
SGMS1-211ENST00000626236 TRIM59Q8IWR1 403 aa9.21□□□□□ -0.94
SGMS1-211ENST00000626236 TMEM130Q8N3G9 435 aa9.21□□□□□ -0.94
SGMS1-211ENST00000626236 OR5B17Q8NGF7 314 aa9.21□□□□□ -0.94
SGMS1-211ENST00000626236 PHOSPHO2Q8TCD6 241 aa9.21□□□□□ -0.94
SGMS1-211ENST00000626236 CACTINQ8WUQ7 758 aaKnown RBP9.21□□□□□ -0.94
SGMS1-211ENST00000626236 SLC35C1Q96A29 364 aa9.21□□□□□ -0.94
SGMS1-211ENST00000626236 C18orf25Q96B23 403 aaPredicted RBP9.21□□□□□ -0.94
SGMS1-211ENST00000626236 ANKRD36BP1Q96IX9 119 aa9.21□□□□□ -0.94
SGMS1-211ENST00000626236 FAM193BQ96PV7 902 aaPredicted RBP9.21□□□□□ -0.94
SGMS1-211ENST00000626236 PPP1R10Q96QC0 940 aaKnown RBP9.21□□□□□ -0.94
SGMS1-211ENST00000626236 MRPL9Q9BYD2 267 aaKnown RBP9.21□□□□□ -0.94
SGMS1-211ENST00000626236 MTMR12Q9C0I1 747 aa9.21□□□□□ -0.94
SGMS1-211ENST00000626236 TMEM117Q9H0C3 514 aa9.21□□□□□ -0.94
SGMS1-211ENST00000626236 TBC1D13Q9NVG8 400 aa9.21□□□□□ -0.94
SGMS1-211ENST00000626236 INTS13Q9NVM9 706 aa9.21□□□□□ -0.94
SGMS1-211ENST00000626236 KANSL3Q9P2N6 904 aa9.21□□□□□ -0.94
SGMS1-211ENST00000626236 TUBGCP4Q9UGJ1 667 aa9.21□□□□□ -0.94
SGMS1-211ENST00000626236 LIMA1Q9UHB6 759 aaKnown RBP9.21□□□□□ -0.94
SGMS1-211ENST00000626236 DERAQ9Y315 318 aa9.21□□□□□ -0.94
SGMS1-211ENST00000626236 C2CD2Q9Y426 696 aa9.21□□□□□ -0.94
SGMS1-211ENST00000626236 XPOTO43592 962 aaKnown RBP9.2□□□□□ -0.94
SGMS1-211ENST00000626236 TLL1O43897 1013 aa9.2□□□□□ -0.94
SGMS1-211ENST00000626236 PHACTR2O75167 634 aa9.2□□□□□ -0.94
SGMS1-211ENST00000626236 CLSTN1O94985 981 aa9.2□□□□□ -0.94
SGMS1-211ENST00000626236 GJB5O95377 273 aa9.2□□□□□ -0.94
SGMS1-211ENST00000626236 SERPINC1P01008 464 aa9.2□□□□□ -0.94
SGMS1-211ENST00000626236 AFPP02771 609 aaKnown RBP9.2□□□□□ -0.94
SGMS1-211ENST00000626236 BMP8BP34820 402 aa9.2□□□□□ -0.94
SGMS1-211ENST00000626236 GUCY2FP51841 1108 aa9.2□□□□□ -0.94
SGMS1-211ENST00000626236 RABGGTBP53611 331 aa9.2□□□□□ -0.94
SGMS1-211ENST00000626236 COPB1P53618 953 aaKnown RBP9.2□□□□□ -0.94
SGMS1-211ENST00000626236 AP3M2P53677 418 aa9.2□□□□□ -0.94
SGMS1-211ENST00000626236 CLDN10P78369 228 aa9.2□□□□□ -0.94
SGMS1-211ENST00000626236 SOX4Q06945 474 aaPredicted RBP9.2□□□□□ -0.94
SGMS1-211ENST00000626236 PPP3CAQ08209 521 aa9.2□□□□□ -0.94
SGMS1-211ENST00000626236 KCNH2Q12809 1159 aa9.2□□□□□ -0.94
SGMS1-211ENST00000626236 BIRC3Q13489 604 aa9.2□□□□□ -0.94
SGMS1-211ENST00000626236 BTG3Q14201 252 aaPredicted RBP9.2□□□□□ -0.94
SGMS1-211ENST00000626236 NAB2Q15742 525 aa9.2□□□□□ -0.94
SGMS1-211ENST00000626236 CBWD6Q4V339 395 aa9.2□□□□□ -0.94
SGMS1-211ENST00000626236 VWA3BQ502W6 1294 aa9.2□□□□□ -0.94
SGMS1-211ENST00000626236 CBWD3Q5JTY5 395 aa9.2□□□□□ -0.94
SGMS1-211ENST00000626236 MIIPQ5JXC2 388 aa9.2□□□□□ -0.94
SGMS1-211ENST00000626236 CBWD5Q5RIA9 395 aa9.2□□□□□ -0.94
SGMS1-211ENST00000626236 PPP1R15BQ5SWA1 713 aa9.2□□□□□ -0.94
SGMS1-211ENST00000626236 NT5DC4Q86YG4 428 aa9.2□□□□□ -0.94
SGMS1-211ENST00000626236 ZNF280BQ86YH2 543 aa9.2□□□□□ -0.94
SGMS1-211ENST00000626236 LRRC43Q8N309 656 aa9.2□□□□□ -0.94
SGMS1-211ENST00000626236 BEST2Q8NFU1 509 aa9.2□□□□□ -0.94
SGMS1-211ENST00000626236 RSPH1Q8WYR4 309 aa9.2□□□□□ -0.94
SGMS1-211ENST00000626236 ZNF516Q92618 1163 aa9.2□□□□□ -0.94
SGMS1-211ENST00000626236 ZNF689Q96CS4 500 aaPredicted RBP9.2□□□□□ -0.94
SGMS1-211ENST00000626236 DDX27Q96GQ7 796 aaKnown RBP9.2□□□□□ -0.94
SGMS1-211ENST00000626236 TSPAN18Q96SJ8 248 aa9.2□□□□□ -0.94
SGMS1-211ENST00000626236 VPS16Q9H269 839 aa9.2□□□□□ -0.94
SGMS1-211ENST00000626236 RC3H2Q9HBD1 1191 aaKnown RBP9.2□□□□□ -0.94
SGMS1-211ENST00000626236 GOLGA2P5Q9HBQ8 144 aa9.2□□□□□ -0.94
SGMS1-211ENST00000626236 TMEM8AQ9HCN3 771 aa9.2□□□□□ -0.94
SGMS1-211ENST00000626236 SLC38A7Q9NVC3 462 aa9.2□□□□□ -0.94
SGMS1-211ENST00000626236 DPP3Q9NY33 737 aa9.2□□□□□ -0.94
SGMS1-211ENST00000626236 HCSTQ9UBK5 93 aa9.2□□□□□ -0.94
SGMS1-211ENST00000626236 UBQLN1Q9UMX0 589 aaKnown RBP9.2□□□□□ -0.94
SGMS1-211ENST00000626236 INSL6Q9Y581 213 aa9.2□□□□□ -0.94
SGMS1-211ENST00000626236 CEP290O15078 2479 aa9.2□□□□□ -0.94
SGMS1-211ENST00000626236 CASTOR2A6NHX0 329 aa9.19□□□□□ -0.94
SGMS1-211ENST00000626236 GRXCR1A8MXD5 290 aa9.19□□□□□ -0.94
SGMS1-211ENST00000626236 ZC3H11AO75152 810 aaKnown RBP eCLIP9.19□□□□□ -0.94
SGMS1-211ENST00000626236 DDHD2O94830 711 aa9.19□□□□□ -0.94
SGMS1-211ENST00000626236 C4BPAP04003 597 aaKnown RBP9.19□□□□□ -0.94
SGMS1-211ENST00000626236 ITGB3P05106 788 aa9.19□□□□□ -0.94
SGMS1-211ENST00000626236 KRT19P08727 400 aa9.19□□□□□ -0.94
SGMS1-211ENST00000626236 HOXB3P14651 431 aaPredicted RBP9.19□□□□□ -0.94
SGMS1-211ENST00000626236 CYP3A5P20815 502 aa9.19□□□□□ -0.94
SGMS1-211ENST00000626236 GTF2H1P32780 548 aa9.19□□□□□ -0.94
SGMS1-211ENST00000626236 OR1G1P47890 313 aa9.19□□□□□ -0.94
SGMS1-211ENST00000626236 FMO5P49326 533 aa9.19□□□□□ -0.94
SGMS1-211ENST00000626236 MXI1P50539 228 aa9.19□□□□□ -0.94
SGMS1-211ENST00000626236 MCCD1P59942 119 aaPredicted RBP9.19□□□□□ -0.94
SGMS1-211ENST00000626236 HTRA4P83105 476 aaPredicted RBP9.19□□□□□ -0.94
SGMS1-211ENST00000626236 FANCCQ00597 558 aa9.19□□□□□ -0.94
SGMS1-211ENST00000626236 MYL7Q01449 175 aa9.19□□□□□ -0.94
SGMS1-211ENST00000626236 TUSC3Q13454 348 aa9.19□□□□□ -0.94
SGMS1-211ENST00000626236 ZBTB6Q15916 424 aa9.19□□□□□ -0.94
SGMS1-211ENST00000626236 SPOUT1Q5T280 376 aaKnown RBP9.19□□□□□ -0.94
SGMS1-211ENST00000626236 TDRD10Q5VZ19 366 aaKnown RBP9.19□□□□□ -0.94
SGMS1-211ENST00000626236 KRT39Q6A163 491 aa9.19□□□□□ -0.94
SGMS1-211ENST00000626236 FAM109BQ6ICB4 259 aaPredicted RBP9.19□□□□□ -0.94
SGMS1-211ENST00000626236 SV2AQ7L0J3 742 aa9.19□□□□□ -0.94
SGMS1-211ENST00000626236 TRAPPC11Q7Z392 1133 aa9.19□□□□□ -0.94
SGMS1-211ENST00000626236 CMTR2Q8IYT2 770 aaKnown RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 185.1 ms