RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 PDXKO00764 312 aa15.19■□□□□ 0.02
SNRPA1-216ENST00000626000 KCNA5P22460 613 aa15.19■□□□□ 0.02
SNRPA1-216ENST00000626000 TNFSF9P41273 254 aa15.19■□□□□ 0.02
SNRPA1-216ENST00000626000 CLCNKBP51801 687 aa15.19■□□□□ 0.02
SNRPA1-216ENST00000626000 ZBTB6Q15916 424 aa15.19■□□□□ 0.02
SNRPA1-216ENST00000626000 TPRNQ4KMQ1 711 aa15.19■□□□□ 0.02
SNRPA1-216ENST00000626000 SEZ6Q53EL9 994 aa15.19■□□□□ 0.02
SNRPA1-216ENST00000626000 SPATA1Q5VX52 437 aa15.19■□□□□ 0.02
SNRPA1-216ENST00000626000 CLEC17AQ6ZS10 378 aa15.19■□□□□ 0.02
SNRPA1-216ENST00000626000 ANKS3Q6ZW76 656 aa15.19■□□□□ 0.02
SNRPA1-216ENST00000626000 ADGRD2Q7Z7M1 963 aa15.19■□□□□ 0.02
SNRPA1-216ENST00000626000 USP37Q86T82 979 aa15.19■□□□□ 0.02
SNRPA1-216ENST00000626000 PIK3R5Q8WYR1 880 aa15.19■□□□□ 0.02
SNRPA1-216ENST00000626000 FAM212AQ96EL1 285 aa15.19■□□□□ 0.02
SNRPA1-216ENST00000626000 RXFP1Q9HBX9 757 aa15.19■□□□□ 0.02
SNRPA1-216ENST00000626000 AGPAT3Q9NRZ7 376 aa15.19■□□□□ 0.02
SNRPA1-216ENST00000626000 R3HCC1Q9Y3T6 440 aaKnown RBP15.19■□□□□ 0.02
SNRPA1-216ENST00000626000 HIDE1A8MVS5 230 aa15.18■□□□□ 0.02
SNRPA1-216ENST00000626000 GOLGA6L22H0YM25 854 aa15.18■□□□□ 0.02
SNRPA1-216ENST00000626000 CSPG5O95196 566 aa15.18■□□□□ 0.02
SNRPA1-216ENST00000626000 CASP1P29466 404 aa15.18■□□□□ 0.02
SNRPA1-216ENST00000626000 PNPLA4P41247 253 aa15.18■□□□□ 0.02
SNRPA1-216ENST00000626000 SNW1Q13573 536 aaKnown RBP15.18■□□□□ 0.02
SNRPA1-216ENST00000626000 FAM171A1Q5VUB5 890 aa15.18■□□□□ 0.02
SNRPA1-216ENST00000626000 KIAA0319Q5VV43 1072 aa15.18■□□□□ 0.02
SNRPA1-216ENST00000626000 EP400NLQ6ZTU2 488 aa15.18■□□□□ 0.02
SNRPA1-216ENST00000626000 RBM23Q86U06 439 aaKnown RBP15.18■□□□□ 0.02
SNRPA1-216ENST00000626000 SLC9A9Q8IVB4 645 aa15.18■□□□□ 0.02
SNRPA1-216ENST00000626000 GUF1Q8N442 669 aaKnown RBP15.18■□□□□ 0.02
SNRPA1-216ENST00000626000 XXYLT1Q8NBI6 393 aa15.18■□□□□ 0.02
SNRPA1-216ENST00000626000 APPL2Q8NEU8 664 aa15.18■□□□□ 0.02
SNRPA1-216ENST00000626000 HDAC7Q8WUI4 952 aa15.18■□□□□ 0.02
SNRPA1-216ENST00000626000 HPS3Q969F9 1004 aa15.18■□□□□ 0.02
SNRPA1-216ENST00000626000 SMARCE1Q969G3 411 aa15.18■□□□□ 0.02
SNRPA1-216ENST00000626000 FBXL18Q96ME1 805 aa15.18■□□□□ 0.02
SNRPA1-216ENST00000626000 ZNF560Q96MR9 790 aa15.18■□□□□ 0.02
SNRPA1-216ENST00000626000 PAAF1Q9BRP4 392 aa15.18■□□□□ 0.02
SNRPA1-216ENST00000626000 CBWD1Q9BRT8 395 aa15.18■□□□□ 0.02
SNRPA1-216ENST00000626000 VN1R3Q9BXE9 311 aa15.18■□□□□ 0.02
SNRPA1-216ENST00000626000 FGFBP2Q9BYJ0 223 aa15.18■□□□□ 0.02
SNRPA1-216ENST00000626000 IGFLR1Q9H665 355 aa15.18■□□□□ 0.02
SNRPA1-216ENST00000626000 HSPBP1Q9NZL4 362 aa15.18■□□□□ 0.02
SNRPA1-216ENST00000626000 BRWD1Q9NSI6 2320 aa15.17■□□□□ 0.02
SNRPA1-216ENST00000626000 TISP43B9A030 160 aa15.17■□□□□ 0.02
SNRPA1-216ENST00000626000 H7C4K7 107 aa15.17■□□□□ 0.02
SNRPA1-216ENST00000626000 CALUO43852 315 aaPredicted RBP15.17■□□□□ 0.02
SNRPA1-216ENST00000626000 LILRB3O75022 631 aa15.17■□□□□ 0.02
SNRPA1-216ENST00000626000 CLASP2O75122 1294 aaKnown RBP15.17■□□□□ 0.02
SNRPA1-216ENST00000626000 FGFR3P22607 806 aa15.17■□□□□ 0.02
SNRPA1-216ENST00000626000 RPL13P26373 211 aaKnown RBP15.17■□□□□ 0.02
SNRPA1-216ENST00000626000 KLRC2P26717 231 aa15.17■□□□□ 0.02
SNRPA1-216ENST00000626000 MCM4P33991 863 aa15.17■□□□□ 0.02
SNRPA1-216ENST00000626000 STK4Q13043 487 aa15.17■□□□□ 0.02
SNRPA1-216ENST00000626000 SMAD4Q13485 552 aaKnown RBP15.17■□□□□ 0.02
SNRPA1-216ENST00000626000 STIM1Q13586 685 aa15.17■□□□□ 0.02
SNRPA1-216ENST00000626000 ZBTB41Q5SVQ8 909 aa15.17■□□□□ 0.02
SNRPA1-216ENST00000626000 JADE1Q6IE81 842 aa15.17■□□□□ 0.02
SNRPA1-216ENST00000626000 CRELD2Q6UXH1 353 aaPredicted RBP15.17■□□□□ 0.02
SNRPA1-216ENST00000626000 CYP26C1Q6V0L0 522 aa15.17■□□□□ 0.02
SNRPA1-216ENST00000626000 RTL10Q7L3V2 364 aa15.17■□□□□ 0.02
SNRPA1-216ENST00000626000 NELFCDQ8IXH7 590 aa15.17■□□□□ 0.02
SNRPA1-216ENST00000626000 KIAA0895Q8NCT3 520 aa15.17■□□□□ 0.02
SNRPA1-216ENST00000626000 RIN2Q8WYP3 895 aaPredicted RBP15.17■□□□□ 0.02
SNRPA1-216ENST00000626000 SUSD3Q96L08 255 aa15.17■□□□□ 0.02
SNRPA1-216ENST00000626000 GPR62Q9BZJ7 368 aa15.17■□□□□ 0.02
SNRPA1-216ENST00000626000 CD207Q9UJ71 328 aa15.17■□□□□ 0.02
SNRPA1-216ENST00000626000 HCFC2Q9Y5Z7 792 aa15.17■□□□□ 0.02
SNRPA1-216ENST00000626000 ANK1P16157 1881 aa15.16■□□□□ 0.02
SNRPA1-216ENST00000626000 TGFB1I1O43294 461 aa15.16■□□□□ 0.02
SNRPA1-216ENST00000626000 GLUD1P00367 558 aa15.16■□□□□ 0.02
SNRPA1-216ENST00000626000 CNPP09543 421 aaKnown RBP15.16■□□□□ 0.02
SNRPA1-216ENST00000626000 HOXD13P35453 343 aa15.16■□□□□ 0.02
SNRPA1-216ENST00000626000 AP3M2P53677 418 aa15.16■□□□□ 0.02
SNRPA1-216ENST00000626000 ITIH3Q06033 890 aa15.16■□□□□ 0.02
SNRPA1-216ENST00000626000 SOX4Q06945 474 aaPredicted RBP15.16■□□□□ 0.02
SNRPA1-216ENST00000626000 KCNC3Q14003 757 aa15.16■□□□□ 0.02
SNRPA1-216ENST00000626000 SNRNP35Q16560 246 aaKnown RBP15.16■□□□□ 0.02
SNRPA1-216ENST00000626000 NFIL3Q16649 462 aa15.16■□□□□ 0.02
SNRPA1-216ENST00000626000 COBLL1Q53SF7 1204 aa15.16■□□□□ 0.02
SNRPA1-216ENST00000626000 WDR49Q8IV35 697 aa15.16■□□□□ 0.02
SNRPA1-216ENST00000626000 GLIS3Q8NEA6 775 aa15.16■□□□□ 0.02
SNRPA1-216ENST00000626000 SPATA20Q8TB22 786 aa15.16■□□□□ 0.02
SNRPA1-216ENST00000626000 C18orf25Q96B23 403 aaPredicted RBP15.16■□□□□ 0.02
SNRPA1-216ENST00000626000 SAAL1Q96ER3 474 aa15.16■□□□□ 0.02
SNRPA1-216ENST00000626000 KLHL5Q96PQ7 755 aa15.16■□□□□ 0.02
SNRPA1-216ENST00000626000 FNBP1Q96RU3 617 aa15.16■□□□□ 0.02
SNRPA1-216ENST00000626000 PLEKHA4Q9H4M7 779 aa15.16■□□□□ 0.02
SNRPA1-216ENST00000626000 GOLGA2P5Q9HBQ8 144 aa15.16■□□□□ 0.02
SNRPA1-216ENST00000626000 TUBGCP4Q9UGJ1 667 aa15.16■□□□□ 0.02
SNRPA1-216ENST00000626000 ITGA11Q9UKX5 1188 aa15.16■□□□□ 0.02
SNRPA1-216ENST00000626000 DSEQ9UL01 958 aa15.16■□□□□ 0.02
SNRPA1-216ENST00000626000 TRAF3IP3Q9Y228 551 aa15.16■□□□□ 0.02
SNRPA1-216ENST00000626000 BACE2Q9Y5Z0 518 aa15.16■□□□□ 0.02
SNRPA1-216ENST00000626000 EYSQ5T1H1 3165 aa15.16■□□□□ 0.02
SNRPA1-216ENST00000626000 SPDYE4A6NLX3 237 aa15.15■□□□□ 0.02
SNRPA1-216ENST00000626000 C2CD2LO14523 706 aa15.15■□□□□ 0.02
SNRPA1-216ENST00000626000 PER2O15055 1255 aa15.15■□□□□ 0.02
SNRPA1-216ENST00000626000 MAPK13O15264 365 aa15.15■□□□□ 0.02
SNRPA1-216ENST00000626000 TEX28O15482 410 aa15.15■□□□□ 0.02
SNRPA1-216ENST00000626000 MEFVO15553 781 aaPredicted RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms