RNA–Protein interactions for RNA: ENST00000624931.1

PCF11-207, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

Gene PCF11, Length 1,720 nt, Biotype TEC, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-207ENST00000624931 FMO2Q99518 471 aa18.88■□□□□ 0.61
PCF11-207ENST00000624931 MKNK1Q9BUB5 465 aa18.88■□□□□ 0.61
PCF11-207ENST00000624931 STRA6Q9BX79 667 aa18.88■□□□□ 0.61
PCF11-207ENST00000624931 TXLNGYQ9BZA5 131 aa18.88■□□□□ 0.61
PCF11-207ENST00000624931 FAM129AQ9BZQ8 928 aa18.88■□□□□ 0.61
PCF11-207ENST00000624931 STMN4Q9H169 189 aaPredicted RBP18.88■□□□□ 0.61
PCF11-207ENST00000624931 RNPEPQ9H4A4 650 aa18.88■□□□□ 0.61
PCF11-207ENST00000624931 SMARCAD1Q9H4L7 1026 aa18.88■□□□□ 0.61
PCF11-207ENST00000624931 DHX33Q9H6R0 707 aaKnown RBP18.88■□□□□ 0.61
PCF11-207ENST00000624931 NRBP2Q9NSY0 501 aa18.88■□□□□ 0.61
PCF11-207ENST00000624931 BCCIPQ9P287 314 aaKnown RBP eCLIP18.88■□□□□ 0.61
PCF11-207ENST00000624931 LARSQ9P2J5 1176 aaKnown RBP18.88■□□□□ 0.61
PCF11-207ENST00000624931 PARP2Q9UGN5 583 aa18.88■□□□□ 0.61
PCF11-207ENST00000624931 TRPC6Q9Y210 931 aa18.88■□□□□ 0.61
PCF11-207ENST00000624931 ADGRA3Q8IWK6 1321 aa18.88■□□□□ 0.61
PCF11-207ENST00000624931 THSD7BQ9C0I4 1608 aa18.87■□□□□ 0.61
PCF11-207ENST00000624931 CLIC2O15247 247 aa18.87■□□□□ 0.61
PCF11-207ENST00000624931 DYNC1LI2O43237 492 aaPredicted RBP18.87■□□□□ 0.61
PCF11-207ENST00000624931 TGFB1I1O43294 461 aa18.87■□□□□ 0.61
PCF11-207ENST00000624931 DNAJC8O75937 253 aaPredicted RBP18.87■□□□□ 0.61
PCF11-207ENST00000624931 NR3C1P04150 777 aa18.87■□□□□ 0.61
PCF11-207ENST00000624931 ACTN1P12814 892 aa18.87■□□□□ 0.61
PCF11-207ENST00000624931 SP3Q02447 781 aa18.87■□□□□ 0.61
PCF11-207ENST00000624931 SNCBQ16143 134 aa18.87■□□□□ 0.61
PCF11-207ENST00000624931 PREPLQ4J6C6 727 aaPredicted RBP18.87■□□□□ 0.61
PCF11-207ENST00000624931 ANKRD20A8PQ5CZ79 823 aa18.87■□□□□ 0.61
PCF11-207ENST00000624931 CPLX4Q7Z7G2 160 aa18.87■□□□□ 0.61
PCF11-207ENST00000624931 ANKS4BQ8N8V4 417 aa18.87■□□□□ 0.61
PCF11-207ENST00000624931 MCPH1Q8NEM0 835 aa18.87■□□□□ 0.61
PCF11-207ENST00000624931 CD99L2Q8TCZ2 262 aa18.87■□□□□ 0.61
PCF11-207ENST00000624931 PPP1R13LQ8WUF5 828 aa18.87■□□□□ 0.61
PCF11-207ENST00000624931 PGM2Q96G03 612 aa18.87■□□□□ 0.61
PCF11-207ENST00000624931 FAM167AQ96KS9 214 aa18.87■□□□□ 0.61
PCF11-207ENST00000624931 RUNDC3BQ96NL0 473 aa18.87■□□□□ 0.61
PCF11-207ENST00000624931 STK33Q9BYT3 514 aa18.87■□□□□ 0.61
PCF11-207ENST00000624931 SIX2Q9NPC8 291 aa18.87■□□□□ 0.61
PCF11-207ENST00000624931 AMACRQ9UHK6 382 aa18.87■□□□□ 0.61
PCF11-207ENST00000624931 GNEQ9Y223 722 aaKnown RBP18.87■□□□□ 0.61
PCF11-207ENST00000624931 TISP43B9A030 160 aa18.86■□□□□ 0.61
PCF11-207ENST00000624931 DDX3XO00571 662 aaKnown RBP eCLIP18.86■□□□□ 0.61
PCF11-207ENST00000624931 GSTA1P08263 222 aa18.86■□□□□ 0.61
PCF11-207ENST00000624931 RFX1P22670 979 aa18.86■□□□□ 0.61
PCF11-207ENST00000624931 SLC8A1P32418 973 aa18.86■□□□□ 0.61
PCF11-207ENST00000624931 NPTX2P47972 431 aa18.86■□□□□ 0.61
PCF11-207ENST00000624931 HADHBP55084 474 aaKnown RBP18.86■□□□□ 0.61
PCF11-207ENST00000624931 NCKAP1LP55160 1127 aa18.86■□□□□ 0.61
PCF11-207ENST00000624931 KIFAP3Q92845 792 aa18.86■□□□□ 0.61
PCF11-207ENST00000624931 CHMP6Q96FZ7 201 aa18.86■□□□□ 0.61
PCF11-207ENST00000624931 SGSM3Q96HU1 749 aa18.86■□□□□ 0.61
PCF11-207ENST00000624931 NEUROG2Q9H2A3 272 aa18.86■□□□□ 0.61
PCF11-207ENST00000624931 UBE4BO95155 1302 aa18.86■□□□□ 0.61
PCF11-207ENST00000624931 ASAP2O43150 1006 aa18.86■□□□□ 0.61
PCF11-207ENST00000624931 SOX5P35711 763 aa18.86■□□□□ 0.61
PCF11-207ENST00000624931 MAGOHP61326 146 aaKnown RBP18.86■□□□□ 0.61
PCF11-207ENST00000624931 DMP1Q13316 513 aaPredicted RBP18.86■□□□□ 0.61
PCF11-207ENST00000624931 XRCC4Q13426 336 aa18.86■□□□□ 0.61
PCF11-207ENST00000624931 TCEAL1Q15170 157 aa18.86■□□□□ 0.61
PCF11-207ENST00000624931 ERMARDQ5T6L9 678 aa18.86■□□□□ 0.61
PCF11-207ENST00000624931 WLSQ5T9L3 541 aa18.86■□□□□ 0.61
PCF11-207ENST00000624931 HAUS6Q7Z4H7 955 aa18.86■□□□□ 0.61
PCF11-207ENST00000624931 DDX42Q86XP3 938 aaKnown RBP eCLIP18.86■□□□□ 0.61
PCF11-207ENST00000624931 PARP9Q8IXQ6 854 aa18.86■□□□□ 0.61
PCF11-207ENST00000624931 REM2Q8IYK8 340 aaPredicted RBP18.86■□□□□ 0.61
PCF11-207ENST00000624931 U2AF1L4Q8WU68 220 aaKnown RBP18.86■□□□□ 0.61
PCF11-207ENST00000624931 CTNNBL1Q8WYA6 563 aaPredicted RBP18.86■□□□□ 0.61
PCF11-207ENST00000624931 MAGOHBQ96A72 148 aaKnown RBP18.86■□□□□ 0.61
PCF11-207ENST00000624931 XPO6Q96QU8 1125 aaKnown RBP18.86■□□□□ 0.61
PCF11-207ENST00000624931 C16orf70Q9BSU1 422 aa18.86■□□□□ 0.61
PCF11-207ENST00000624931 TMEM109Q9BVC6 243 aa18.86■□□□□ 0.61
PCF11-207ENST00000624931 TTI1O43156 1089 aa18.85■□□□□ 0.61
PCF11-207ENST00000624931 PSMC2P35998 433 aaKnown RBP18.85■□□□□ 0.61
PCF11-207ENST00000624931 GALCP54803 685 aa18.85■□□□□ 0.61
PCF11-207ENST00000624931 ITIH4Q14624 930 aa18.85■□□□□ 0.61
PCF11-207ENST00000624931 DUPD1Q68J44 220 aa18.85■□□□□ 0.61
PCF11-207ENST00000624931 TLK2Q86UE8 772 aa18.85■□□□□ 0.61
PCF11-207ENST00000624931 LRRC71Q8N4P6 559 aa18.85■□□□□ 0.61
PCF11-207ENST00000624931 TMEM161BQ8NDZ6 487 aa18.85■□□□□ 0.61
PCF11-207ENST00000624931 OR2W6PQ8NHA6 318 aa18.85■□□□□ 0.61
PCF11-207ENST00000624931 SLC7A3Q8WY07 619 aa18.85■□□□□ 0.61
PCF11-207ENST00000624931 SLC35C1Q96A29 364 aa18.85■□□□□ 0.61
PCF11-207ENST00000624931 ERP44Q9BS26 406 aa18.85■□□□□ 0.61
PCF11-207ENST00000624931 GCNT4Q9P109 453 aa18.85■□□□□ 0.61
PCF11-207ENST00000624931 MIF4GDA9UHW6 222 aaKnown RBP18.84■□□□□ 0.61
PCF11-207ENST00000624931 DRD4P21917 467 aa18.84■□□□□ 0.61
PCF11-207ENST00000624931 GLRA2P23416 452 aa18.84■□□□□ 0.61
PCF11-207ENST00000624931 RFC5P40937 340 aa18.84■□□□□ 0.61
PCF11-207ENST00000624931 IGBP1P78318 339 aa18.84■□□□□ 0.61
PCF11-207ENST00000624931 DR1Q01658 176 aa18.84■□□□□ 0.61
PCF11-207ENST00000624931 MKRN4PQ13434 485 aaPredicted RBP18.84■□□□□ 0.61
PCF11-207ENST00000624931 DCAF17Q5H9S7 520 aaPredicted RBP18.84■□□□□ 0.61
PCF11-207ENST00000624931 C6orf118Q5T5N4 469 aa18.84■□□□□ 0.61
PCF11-207ENST00000624931 STXBP4Q6ZWJ1 553 aa18.84■□□□□ 0.61
PCF11-207ENST00000624931 RHOT2Q8IXI1 618 aa18.84■□□□□ 0.61
PCF11-207ENST00000624931 FUKQ8N0W3 1084 aa18.84■□□□□ 0.61
PCF11-207ENST00000624931 CCDC197Q8NCU1 140 aa18.84■□□□□ 0.61
PCF11-207ENST00000624931 GIMAP7Q8NHV1 300 aa18.84■□□□□ 0.61
PCF11-207ENST00000624931 PABPC3Q9H361 631 aaKnown RBP18.84■□□□□ 0.61
PCF11-207ENST00000624931 CXorf56Q9H5V9 222 aa18.84■□□□□ 0.61
PCF11-207ENST00000624931 KMT5AQ9NQR1 393 aa18.84■□□□□ 0.61
PCF11-207ENST00000624931 ERAP1Q9NZ08 941 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms