RNA–Protein interactions for RNA: ENST00000623185.3

LINC00963-216, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 786 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-216ENST00000623185 BCAR1P56945 870 aa13.47□□□□□ -0.25
LINC00963-216ENST00000623185 RBP5P82980 135 aa13.47□□□□□ -0.25
LINC00963-216ENST00000623185 SOX4Q06945 474 aaPredicted RBP13.47□□□□□ -0.25
LINC00963-216ENST00000623185 TCP11X2Q5H9J9 407 aa13.47□□□□□ -0.25
LINC00963-216ENST00000623185 KCNT2Q6UVM3 1135 aa13.47□□□□□ -0.25
LINC00963-216ENST00000623185 C15orf39Q6ZRI6 1047 aa13.47□□□□□ -0.25
LINC00963-216ENST00000623185 SV2AQ7L0J3 742 aa13.47□□□□□ -0.25
LINC00963-216ENST00000623185 TRAPPC11Q7Z392 1133 aa13.47□□□□□ -0.25
LINC00963-216ENST00000623185 AOPEPQ8N6M6 819 aa13.47□□□□□ -0.25
LINC00963-216ENST00000623185 OR5B17Q8NGF7 314 aa13.47□□□□□ -0.25
LINC00963-216ENST00000623185 CXorf38Q8TB03 319 aa13.47□□□□□ -0.25
LINC00963-216ENST00000623185 SLC35C1Q96A29 364 aa13.47□□□□□ -0.25
LINC00963-216ENST00000623185 C18orf25Q96B23 403 aaPredicted RBP13.47□□□□□ -0.25
LINC00963-216ENST00000623185 HSD3B7Q9H2F3 369 aa13.47□□□□□ -0.25
LINC00963-216ENST00000623185 SLC28A3Q9HAS3 691 aa13.47□□□□□ -0.25
LINC00963-216ENST00000623185 DNAJB4Q9UDY4 337 aa13.47□□□□□ -0.25
LINC00963-216ENST00000623185 ITGA11Q9UKX5 1188 aa13.47□□□□□ -0.25
LINC00963-216ENST00000623185 YBX2Q9Y2T7 364 aaKnown RBP13.47□□□□□ -0.25
LINC00963-216ENST00000623185 PCDHB12Q9Y5F1 795 aa13.47□□□□□ -0.25
LINC00963-216ENST00000623185 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.47□□□□□ -0.25
LINC00963-216ENST00000623185 LCHNA4D1U4 455 aa13.46□□□□□ -0.25
LINC00963-216ENST00000623185 KCNJ18B7U540 433 aa13.46□□□□□ -0.25
LINC00963-216ENST00000623185 TMEM189-UBE2V1I3L0A0 370 aa13.46□□□□□ -0.25
LINC00963-216ENST00000623185 TULP1O00294 542 aaPredicted RBP13.46□□□□□ -0.25
LINC00963-216ENST00000623185 P4HA2O15460 535 aa13.46□□□□□ -0.25
LINC00963-216ENST00000623185 CST3P01034 146 aaPredicted RBP13.46□□□□□ -0.25
LINC00963-216ENST00000623185 CA3P07451 260 aa13.46□□□□□ -0.25
LINC00963-216ENST00000623185 TMEM191BP0C7N4 346 aa13.46□□□□□ -0.25
LINC00963-216ENST00000623185 CDK11BP21127 795 aaKnown RBP13.46□□□□□ -0.25
LINC00963-216ENST00000623185 OR1G1P47890 313 aa13.46□□□□□ -0.25
LINC00963-216ENST00000623185 CLCNKBP51801 687 aa13.46□□□□□ -0.25
LINC00963-216ENST00000623185 ERVK-21P61565 698 aa13.46□□□□□ -0.25
LINC00963-216ENST00000623185 TAP1Q03518 808 aa13.46□□□□□ -0.25
LINC00963-216ENST00000623185 PPP3CAQ08209 521 aa13.46□□□□□ -0.25
LINC00963-216ENST00000623185 KCNH2Q12809 1159 aa13.46□□□□□ -0.25
LINC00963-216ENST00000623185 KCNJ12Q14500 433 aa13.46□□□□□ -0.25
LINC00963-216ENST00000623185 ZACNQ401N2 412 aa13.46□□□□□ -0.25
LINC00963-216ENST00000623185 SPOUT1Q5T280 376 aaKnown RBP13.46□□□□□ -0.25
LINC00963-216ENST00000623185 C9orf57Q5W0N0 161 aa13.46□□□□□ -0.25
LINC00963-216ENST00000623185 KRT39Q6A163 491 aa13.46□□□□□ -0.25
LINC00963-216ENST00000623185 CREBRFQ8IUR6 639 aa13.46□□□□□ -0.25
LINC00963-216ENST00000623185 C1orf127Q8N9H9 656 aa13.46□□□□□ -0.25
LINC00963-216ENST00000623185 COLGALT1Q8NBJ5 622 aa13.46□□□□□ -0.25
LINC00963-216ENST00000623185 CNOT6LQ96LI5 555 aaKnown RBP13.46□□□□□ -0.25
LINC00963-216ENST00000623185 ZNF558Q96NG5 402 aa13.46□□□□□ -0.25
LINC00963-216ENST00000623185 TGS1Q96RS0 853 aaKnown RBP13.46□□□□□ -0.25
LINC00963-216ENST00000623185 TUBGCP2Q9BSJ2 902 aa13.46□□□□□ -0.25
LINC00963-216ENST00000623185 TMEM8AQ9HCN3 771 aa13.46□□□□□ -0.25
LINC00963-216ENST00000623185 SPG21Q9NZD8 308 aa13.46□□□□□ -0.25
LINC00963-216ENST00000623185 STK39Q9UEW8 545 aa13.46□□□□□ -0.25
LINC00963-216ENST00000623185 COQ4Q9Y3A0 265 aa13.46□□□□□ -0.25
LINC00963-216ENST00000623185 PTPRJQ12913 1337 aa13.45□□□□□ -0.26
LINC00963-216ENST00000623185 B4GALT3O60512 393 aa13.45□□□□□ -0.26
LINC00963-216ENST00000623185 ZC3H11AO75152 810 aaKnown RBP eCLIP13.45□□□□□ -0.26
LINC00963-216ENST00000623185 B3GAT3O94766 335 aa13.45□□□□□ -0.26
LINC00963-216ENST00000623185 DNAJB2P25686 324 aa13.45□□□□□ -0.26
LINC00963-216ENST00000623185 ATICP31939 592 aa13.45□□□□□ -0.26
LINC00963-216ENST00000623185 PPM1AP35813 382 aa13.45□□□□□ -0.26
LINC00963-216ENST00000623185 PNPLA4P41247 253 aa13.45□□□□□ -0.26
LINC00963-216ENST00000623185 MTIF2P46199 727 aaKnown RBP13.45□□□□□ -0.26
LINC00963-216ENST00000623185 SLC11A1P49279 550 aa13.45□□□□□ -0.26
LINC00963-216ENST00000623185 TPM4P67936 248 aa13.45□□□□□ -0.26
LINC00963-216ENST00000623185 PLCB3Q01970 1234 aa13.45□□□□□ -0.26
LINC00963-216ENST00000623185 KRT17Q04695 432 aa13.45□□□□□ -0.26
LINC00963-216ENST00000623185 SGSM1Q2NKQ1 1148 aa13.45□□□□□ -0.26
LINC00963-216ENST00000623185 TCERG1LQ5VWI1 586 aa13.45□□□□□ -0.26
LINC00963-216ENST00000623185 LUZP1Q86V48 1076 aa13.45□□□□□ -0.26
LINC00963-216ENST00000623185 SLC39A11Q8N1S5 342 aa13.45□□□□□ -0.26
LINC00963-216ENST00000623185 LRRC52Q8N7C0 313 aa13.45□□□□□ -0.26
LINC00963-216ENST00000623185 ANKRD20A12PQ8NF67 263 aa13.45□□□□□ -0.26
LINC00963-216ENST00000623185 TIFAQ96CG3 184 aa13.45□□□□□ -0.26
LINC00963-216ENST00000623185 IGSF21Q96ID5 467 aa13.45□□□□□ -0.26
LINC00963-216ENST00000623185 MTMR12Q9C0I1 747 aa13.45□□□□□ -0.26
LINC00963-216ENST00000623185 TUBGCP4Q9UGJ1 667 aa13.45□□□□□ -0.26
LINC00963-216ENST00000623185 LIMA1Q9UHB6 759 aaKnown RBP13.45□□□□□ -0.26
LINC00963-216ENST00000623185 R3HCC1Q9Y3T6 440 aaKnown RBP13.45□□□□□ -0.26
LINC00963-216ENST00000623185 PDE4DIPQ5VU43 2346 aa13.45□□□□□ -0.26
LINC00963-216ENST00000623185 TMEM265A0A087WTH1 108 aa13.44□□□□□ -0.26
LINC00963-216ENST00000623185 CASTOR2A6NHX0 329 aa13.44□□□□□ -0.26
LINC00963-216ENST00000623185 GOLGA6L19H0YKK7 550 aa13.44□□□□□ -0.26
LINC00963-216ENST00000623185 PODXLO00592 558 aa13.44□□□□□ -0.26
LINC00963-216ENST00000623185 TRAPPC3O43617 180 aa13.44□□□□□ -0.26
LINC00963-216ENST00000623185 N4BP1O75113 896 aaKnown RBP13.44□□□□□ -0.26
LINC00963-216ENST00000623185 PHACTR2O75167 634 aa13.44□□□□□ -0.26
LINC00963-216ENST00000623185 TADA2AO75478 443 aa13.44□□□□□ -0.26
LINC00963-216ENST00000623185 STAU1O95793 577 aaKnown RBP13.44□□□□□ -0.26
LINC00963-216ENST00000623185 EFEMP2O95967 443 aa13.44□□□□□ -0.26
LINC00963-216ENST00000623185 AFPP02771 609 aaKnown RBP13.44□□□□□ -0.26
LINC00963-216ENST00000623185 ITGB3P05106 788 aa13.44□□□□□ -0.26
LINC00963-216ENST00000623185 FAM163BP0C2L3 166 aa13.44□□□□□ -0.26
LINC00963-216ENST00000623185 TRIM49P0CI25 452 aa13.44□□□□□ -0.26
LINC00963-216ENST00000623185 TRIM49CP0CI26 452 aa13.44□□□□□ -0.26
LINC00963-216ENST00000623185 GCLMP48507 274 aa13.44□□□□□ -0.26
LINC00963-216ENST00000623185 FMO5P49326 533 aa13.44□□□□□ -0.26
LINC00963-216ENST00000623185 LILRA4P59901 499 aa13.44□□□□□ -0.26
LINC00963-216ENST00000623185 CETN1Q12798 172 aa13.44□□□□□ -0.26
LINC00963-216ENST00000623185 TRPC3Q13507 836 aa13.44□□□□□ -0.26
LINC00963-216ENST00000623185 MAN2A1Q16706 1144 aa13.44□□□□□ -0.26
LINC00963-216ENST00000623185 VWA3BQ502W6 1294 aa13.44□□□□□ -0.26
LINC00963-216ENST00000623185 EPC2Q52LR7 807 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms