RNA–Protein interactions for RNA: ENST00000622817.4

CBWD3-219, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,877 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-219ENST00000622817 ANKRD36BP1Q96IX9 119 aa7.54□□□□□ -1.2
CBWD3-219ENST00000622817 ACAP3Q96P50 834 aa7.54□□□□□ -1.2
CBWD3-219ENST00000622817 IMPG2Q9BZV3 1241 aa7.54□□□□□ -1.2
CBWD3-219ENST00000622817 SENP6Q9GZR1 1112 aaPredicted RBP7.54□□□□□ -1.2
CBWD3-219ENST00000622817 UNC93B1Q9H1C4 597 aa7.54□□□□□ -1.2
CBWD3-219ENST00000622817 C1orf112Q9NSG2 853 aa7.54□□□□□ -1.2
CBWD3-219ENST00000622817 AJAP1Q9UKB5 411 aaPredicted RBP7.54□□□□□ -1.2
CBWD3-219ENST00000622817 PHF24Q9UPV7 400 aa7.54□□□□□ -1.2
CBWD3-219ENST00000622817 PIN4Q9Y237 131 aaKnown RBP7.54□□□□□ -1.2
CBWD3-219ENST00000622817 MROH7Q68CQ1 1323 aa7.54□□□□□ -1.2
CBWD3-219ENST00000622817 A0A1W2PQ45 241 aaPredicted RBP7.53□□□□□ -1.2
CBWD3-219ENST00000622817 A0A1W2PQY0 241 aa7.53□□□□□ -1.2
CBWD3-219ENST00000622817 FOXN3O00409 490 aaPredicted RBP7.53□□□□□ -1.2
CBWD3-219ENST00000622817 CAND2O75155 1236 aa7.53□□□□□ -1.2
CBWD3-219ENST00000622817 LRRN2O75325 713 aa7.53□□□□□ -1.2
CBWD3-219ENST00000622817 OFD1O75665 1012 aa7.53□□□□□ -1.2
CBWD3-219ENST00000622817 GFPT2O94808 682 aa7.53□□□□□ -1.2
CBWD3-219ENST00000622817 LCA5LO95447 670 aa7.53□□□□□ -1.2
CBWD3-219ENST00000622817 CHRNA1P02708 482 aa7.53□□□□□ -1.2
CBWD3-219ENST00000622817 PLEKP08567 350 aaPredicted RBP7.53□□□□□ -1.2
CBWD3-219ENST00000622817 THPOP40225 353 aa7.53□□□□□ -1.2
CBWD3-219ENST00000622817 KIF11P52732 1056 aa7.53□□□□□ -1.2
CBWD3-219ENST00000622817 YARSP54577 528 aaKnown RBP7.53□□□□□ -1.2
CBWD3-219ENST00000622817 TRPC3Q13507 836 aa7.53□□□□□ -1.2
CBWD3-219ENST00000622817 NCOA4Q13772 614 aa7.53□□□□□ -1.2
CBWD3-219ENST00000622817 ARHGAP44Q17R89 818 aa7.53□□□□□ -1.2
CBWD3-219ENST00000622817 ASTE1Q2TB18 679 aaPredicted RBP7.53□□□□□ -1.2
CBWD3-219ENST00000622817 SLC10A6Q3KNW5 377 aa7.53□□□□□ -1.2
CBWD3-219ENST00000622817 DNTTIP2Q5QJE6 756 aaKnown RBP7.53□□□□□ -1.2
CBWD3-219ENST00000622817 NYAP1Q6ZVC0 841 aa7.53□□□□□ -1.2
CBWD3-219ENST00000622817 NT5DC4Q86YG4 428 aa7.53□□□□□ -1.2
CBWD3-219ENST00000622817 TMEM192Q8IY95 271 aa7.53□□□□□ -1.2
CBWD3-219ENST00000622817 TXLNBQ8N3L3 684 aa7.53□□□□□ -1.2
CBWD3-219ENST00000622817 SLC43A3Q8NBI5 491 aa7.53□□□□□ -1.2
CBWD3-219ENST00000622817 ACRBPQ8NEB7 543 aa7.53□□□□□ -1.2
CBWD3-219ENST00000622817 HELQQ8TDG4 1101 aa7.53□□□□□ -1.2
CBWD3-219ENST00000622817 JAKMIP2Q96AA8 810 aa7.53□□□□□ -1.2
CBWD3-219ENST00000622817 C16orf45Q96MC5 204 aaPredicted RBP7.53□□□□□ -1.2
CBWD3-219ENST00000622817 TRIM6Q9C030 488 aaPredicted RBP7.53□□□□□ -1.2
CBWD3-219ENST00000622817 MTMR12Q9C0I1 747 aa7.53□□□□□ -1.2
CBWD3-219ENST00000622817 GPR88Q9GZN0 384 aa7.53□□□□□ -1.2
CBWD3-219ENST00000622817 HAUS4Q9H6D7 363 aa7.53□□□□□ -1.2
CBWD3-219ENST00000622817 PLEKHA5Q9HAU0 1116 aa7.53□□□□□ -1.2
CBWD3-219ENST00000622817 LUC7LQ9NQ29 371 aaKnown RBP7.53□□□□□ -1.2
CBWD3-219ENST00000622817 STARD7Q9NQZ5 370 aa7.53□□□□□ -1.2
CBWD3-219ENST00000622817 CHST12Q9NRB3 414 aa7.53□□□□□ -1.2
CBWD3-219ENST00000622817 NOC2LQ9Y3T9 749 aaKnown RBP7.53□□□□□ -1.2
CBWD3-219ENST00000622817 DNM1LO00429 736 aa7.53□□□□□ -1.2
CBWD3-219ENST00000622817 GPR182O15218 404 aa7.53□□□□□ -1.2
CBWD3-219ENST00000622817 EVI5O60447 810 aa7.53□□□□□ -1.2
CBWD3-219ENST00000622817 RPS6KA5O75582 802 aa7.53□□□□□ -1.2
CBWD3-219ENST00000622817 TBXAS1P24557 533 aaPredicted RBP7.53□□□□□ -1.2
CBWD3-219ENST00000622817 PTK2Q05397 1052 aa7.53□□□□□ -1.2
CBWD3-219ENST00000622817 MGAT3Q09327 533 aa7.53□□□□□ -1.2
CBWD3-219ENST00000622817 TMEM132DQ14C87 1099 aa7.53□□□□□ -1.2
CBWD3-219ENST00000622817 SGSM1Q2NKQ1 1148 aa7.53□□□□□ -1.2
CBWD3-219ENST00000622817 ARHGAP29Q52LW3 1261 aa7.53□□□□□ -1.2
CBWD3-219ENST00000622817 SMYD5Q6GMV2 418 aa7.53□□□□□ -1.2
CBWD3-219ENST00000622817 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.53□□□□□ -1.2
CBWD3-219ENST00000622817 ZNF662Q6ZS27 426 aa7.53□□□□□ -1.2
CBWD3-219ENST00000622817 KIAA1328Q86T90 577 aa7.53□□□□□ -1.2
CBWD3-219ENST00000622817 FAM228AQ86W67 206 aa7.53□□□□□ -1.2
CBWD3-219ENST00000622817 GPIHBP1Q8IV16 184 aa7.53□□□□□ -1.2
CBWD3-219ENST00000622817 EFCAB13Q8IY85 973 aa7.53□□□□□ -1.2
CBWD3-219ENST00000622817 FAM71AQ8IYT1 594 aa7.53□□□□□ -1.2
CBWD3-219ENST00000622817 SHC3Q92529 594 aa7.53□□□□□ -1.2
CBWD3-219ENST00000622817 TAF4BQ92750 862 aa7.53□□□□□ -1.2
CBWD3-219ENST00000622817 TATDN2Q93075 761 aa7.53□□□□□ -1.2
CBWD3-219ENST00000622817 WNT8BQ93098 351 aa7.53□□□□□ -1.2
CBWD3-219ENST00000622817 FAM84AQ96KN4 292 aa7.53□□□□□ -1.2
CBWD3-219ENST00000622817 KREMEN1Q96MU8 473 aa7.53□□□□□ -1.2
CBWD3-219ENST00000622817 PI4K2AQ9BTU6 479 aa7.53□□□□□ -1.2
CBWD3-219ENST00000622817 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.53□□□□□ -1.2
CBWD3-219ENST00000622817 EIF2AQ9BY44 585 aaKnown RBP7.53□□□□□ -1.2
CBWD3-219ENST00000622817 PAK6Q9NQU5 681 aaPredicted RBP7.53□□□□□ -1.2
CBWD3-219ENST00000622817 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.53□□□□□ -1.2
CBWD3-219ENST00000622817 TRMT13Q9NUP7 481 aaKnown RBP7.53□□□□□ -1.2
CBWD3-219ENST00000622817 DERAQ9Y315 318 aa7.53□□□□□ -1.2
CBWD3-219ENST00000622817 REXO2Q9Y3B8 237 aaKnown RBP7.53□□□□□ -1.2
CBWD3-219ENST00000622817 C2CD2Q9Y426 696 aa7.53□□□□□ -1.2
CBWD3-219ENST00000622817 RBAK-RBAKDNI3L0D1 243 aa7.52□□□□□ -1.21
CBWD3-219ENST00000622817 ARVCFO00192 962 aa7.52□□□□□ -1.21
CBWD3-219ENST00000622817 ASS1P00966 412 aaKnown RBP7.52□□□□□ -1.21
CBWD3-219ENST00000622817 NFICP08651 508 aa7.52□□□□□ -1.21
CBWD3-219ENST00000622817 CTSHP09668 335 aa7.52□□□□□ -1.21
CBWD3-219ENST00000622817 PNMA6AP0CW24 399 aaPredicted RBP7.52□□□□□ -1.21
CBWD3-219ENST00000622817 CCL5P13501 91 aa7.52□□□□□ -1.21
CBWD3-219ENST00000622817 TNNT1P13805 278 aa7.52□□□□□ -1.21
CBWD3-219ENST00000622817 USP8P40818 1118 aa7.52□□□□□ -1.21
CBWD3-219ENST00000622817 NOP14P78316 857 aaKnown RBP7.52□□□□□ -1.21
CBWD3-219ENST00000622817 CYP27A1Q02318 531 aa7.52□□□□□ -1.21
CBWD3-219ENST00000622817 CAMK2BQ13554 666 aa7.52□□□□□ -1.21
CBWD3-219ENST00000622817 SLC18A3Q16572 532 aa7.52□□□□□ -1.21
CBWD3-219ENST00000622817 TRIM71Q2Q1W2 868 aaKnown RBP7.52□□□□□ -1.21
CBWD3-219ENST00000622817 FAM26DQ5JW98 314 aa7.52□□□□□ -1.21
CBWD3-219ENST00000622817 UBXN11Q5T124 520 aa7.52□□□□□ -1.21
CBWD3-219ENST00000622817 C10orf76Q5T2E6 689 aa7.52□□□□□ -1.21
CBWD3-219ENST00000622817 JADE1Q6IE81 842 aa7.52□□□□□ -1.21
CBWD3-219ENST00000622817 ZNF571Q7Z3V5 609 aaPredicted RBP7.52□□□□□ -1.21
CBWD3-219ENST00000622817 DHX38Q92620 1227 aaKnown RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms