RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 BTBD7Q9P203 1132 aa12.78□□□□□ -0.36
TP53-227ENST00000622645 PCDHB4Q9Y5E5 795 aa12.78□□□□□ -0.36
TP53-227ENST00000622645 SMIM23A6NLE4 172 aa12.78□□□□□ -0.36
TP53-227ENST00000622645 FSCN2O14926 492 aa12.78□□□□□ -0.36
TP53-227ENST00000622645 CYP1A1P04798 512 aaPredicted RBP12.78□□□□□ -0.36
TP53-227ENST00000622645 FGFR4P22455 802 aa12.78□□□□□ -0.36
TP53-227ENST00000622645 CUL2Q13617 745 aa12.78□□□□□ -0.36
TP53-227ENST00000622645 SGO2Q562F6 1265 aa12.78□□□□□ -0.36
TP53-227ENST00000622645 EFCAB13Q8IY85 973 aa12.78□□□□□ -0.36
TP53-227ENST00000622645 DNERQ8NFT8 737 aa12.78□□□□□ -0.36
TP53-227ENST00000622645 ZNF473Q8WTR7 871 aaKnown RBP12.78□□□□□ -0.36
TP53-227ENST00000622645 LRRC19Q9H756 370 aa12.78□□□□□ -0.36
TP53-227ENST00000622645 CHST7Q9NS84 486 aa12.78□□□□□ -0.36
TP53-227ENST00000622645 GPRC5DQ9NZD1 345 aa12.78□□□□□ -0.36
TP53-227ENST00000622645 NUB1Q9Y5A7 615 aa12.78□□□□□ -0.36
TP53-227ENST00000622645 MYH9P35579 1960 aaKnown RBP12.78□□□□□ -0.36
TP53-227ENST00000622645 A0A0B4J269 797 aa12.77□□□□□ -0.36
TP53-227ENST00000622645 USP2O75604 605 aaPredicted RBP12.77□□□□□ -0.36
TP53-227ENST00000622645 NUDT17P0C025 328 aa12.77□□□□□ -0.36
TP53-227ENST00000622645 EIF3BP55884 814 aaKnown RBP12.77□□□□□ -0.36
TP53-227ENST00000622645 CENPCQ03188 943 aa12.77□□□□□ -0.36
TP53-227ENST00000622645 VGLL4Q14135 290 aa12.77□□□□□ -0.36
TP53-227ENST00000622645 PPP1R7Q15435 360 aa12.77□□□□□ -0.36
TP53-227ENST00000622645 SPDYCQ5MJ68 293 aa12.77□□□□□ -0.36
TP53-227ENST00000622645 DENND2CQ68D51 928 aa12.77□□□□□ -0.36
TP53-227ENST00000622645 CHST13Q8NET6 341 aa12.77□□□□□ -0.36
TP53-227ENST00000622645 NIFKQ9BYG3 293 aaKnown RBP12.77□□□□□ -0.36
TP53-227ENST00000622645 R3HDMLQ9H3Y0 253 aa12.77□□□□□ -0.36
TP53-227ENST00000622645 KCNG1Q9UIX4 513 aa12.77□□□□□ -0.36
TP53-227ENST00000622645 LTBP3Q9NS15 1303 aa12.77□□□□□ -0.36
TP53-227ENST00000622645 IGKV6D-21A0A0A0MT36 114 aa12.77□□□□□ -0.37
TP53-227ENST00000622645 FARP2O94887 1054 aaPredicted RBP12.77□□□□□ -0.37
TP53-227ENST00000622645 ECEL1O95672 775 aa12.77□□□□□ -0.37
TP53-227ENST00000622645 ABCD1P33897 745 aa12.77□□□□□ -0.37
TP53-227ENST00000622645 MAGEA9P43362 315 aa12.77□□□□□ -0.37
TP53-227ENST00000622645 FNTAP49354 379 aa12.77□□□□□ -0.37
TP53-227ENST00000622645 BPIFB4P59827 614 aa12.77□□□□□ -0.37
TP53-227ENST00000622645 CAPSQ13938 189 aa12.77□□□□□ -0.37
TP53-227ENST00000622645 SLFN12LQ6IEE8 588 aa12.77□□□□□ -0.37
TP53-227ENST00000622645 LBX2Q6XYB7 198 aa12.77□□□□□ -0.37
TP53-227ENST00000622645 MON1BQ7L1V2 547 aa12.77□□□□□ -0.37
TP53-227ENST00000622645 ZNF677Q86XU0 584 aa12.77□□□□□ -0.37
TP53-227ENST00000622645 C12orf50Q8NA57 414 aaPredicted RBP12.77□□□□□ -0.37
TP53-227ENST00000622645 MDM1Q8TC05 714 aa12.77□□□□□ -0.37
TP53-227ENST00000622645 FAM81BQ96LP2 452 aa12.77□□□□□ -0.37
TP53-227ENST00000622645 AVENQ9NQS1 362 aaPredicted RBP12.77□□□□□ -0.37
TP53-227ENST00000622645 MTRF1LQ9UGC7 380 aaKnown RBP12.77□□□□□ -0.37
TP53-227ENST00000622645 SNCAIPQ9Y6H5 919 aa12.77□□□□□ -0.37
TP53-227ENST00000622645 PASKQ96RG2 1323 aa12.77□□□□□ -0.37
TP53-227ENST00000622645 CNTNAP2Q9UHC6 1331 aa12.77□□□□□ -0.37
TP53-227ENST00000622645 GJB6O95452 261 aa12.76□□□□□ -0.37
TP53-227ENST00000622645 PIGRP01833 764 aa12.76□□□□□ -0.37
TP53-227ENST00000622645 GNA15P30679 374 aa12.76□□□□□ -0.37
TP53-227ENST00000622645 TNFSF9P41273 254 aa12.76□□□□□ -0.37
TP53-227ENST00000622645 STAT5BP51692 787 aa12.76□□□□□ -0.37
TP53-227ENST00000622645 NOP14P78316 857 aaKnown RBP12.76□□□□□ -0.37
TP53-227ENST00000622645 NOL9Q5SY16 702 aaKnown RBP12.76□□□□□ -0.37
TP53-227ENST00000622645 CCDC25Q86WR0 208 aa12.76□□□□□ -0.37
TP53-227ENST00000622645 ART4Q93070 314 aa12.76□□□□□ -0.37
TP53-227ENST00000622645 PLVAPQ9BX97 442 aa12.76□□□□□ -0.37
TP53-227ENST00000622645 HEMGNQ9BXL5 484 aa12.76□□□□□ -0.37
TP53-227ENST00000622645 ADAM22Q9P0K1 906 aa12.76□□□□□ -0.37
TP53-227ENST00000622645 PARP2Q9UGN5 583 aa12.76□□□□□ -0.37
TP53-227ENST00000622645 ADGRA2Q96PE1 1338 aa12.76□□□□□ -0.37
TP53-227ENST00000622645 BRCA1P38398 1863 aaKnown RBP12.76□□□□□ -0.37
TP53-227ENST00000622645 SOWAHBA6NEL2 793 aa12.76□□□□□ -0.37
TP53-227ENST00000622645 TP73O15350 636 aa12.76□□□□□ -0.37
TP53-227ENST00000622645 FAM107AO95990 144 aa12.76□□□□□ -0.37
TP53-227ENST00000622645 CST3P01034 146 aaPredicted RBP12.76□□□□□ -0.37
TP53-227ENST00000622645 NF2P35240 595 aa12.76□□□□□ -0.37
TP53-227ENST00000622645 KRT17Q04695 432 aa12.76□□□□□ -0.37
TP53-227ENST00000622645 TARBP2Q15633 366 aaKnown RBP12.76□□□□□ -0.37
TP53-227ENST00000622645 TRIP13Q15645 432 aaPredicted RBP12.76□□□□□ -0.37
TP53-227ENST00000622645 LY6KQ17RY6 165 aa12.76□□□□□ -0.37
TP53-227ENST00000622645 SH3D19Q5HYK7 790 aa12.76□□□□□ -0.37
TP53-227ENST00000622645 MMS22LQ6ZRQ5 1243 aa12.76□□□□□ -0.37
TP53-227ENST00000622645 ZBTB33Q86T24 672 aa12.76□□□□□ -0.37
TP53-227ENST00000622645 NCAPG2Q86XI2 1143 aa12.76□□□□□ -0.37
TP53-227ENST00000622645 ABRAQ8N0Z2 381 aa12.76□□□□□ -0.37
TP53-227ENST00000622645 RBBP8NLQ8NC74 664 aaPredicted RBP12.76□□□□□ -0.37
TP53-227ENST00000622645 PRPF31Q8WWY3 499 aaKnown RBP12.76□□□□□ -0.37
TP53-227ENST00000622645 BBXQ8WY36 941 aaPredicted RBP12.76□□□□□ -0.37
TP53-227ENST00000622645 TLCD1Q96CP7 247 aa12.76□□□□□ -0.37
TP53-227ENST00000622645 DDX27Q96GQ7 796 aaKnown RBP12.76□□□□□ -0.37
TP53-227ENST00000622645 FAM118BQ9BPY3 351 aa12.76□□□□□ -0.37
TP53-227ENST00000622645 LCTP09848 1927 aa12.76□□□□□ -0.37
TP53-227ENST00000622645 LDHAP00338 332 aaKnown RBP12.75□□□□□ -0.37
TP53-227ENST00000622645 CLTAP09496 248 aa12.75□□□□□ -0.37
TP53-227ENST00000622645 MYBL1P10243 752 aa12.75□□□□□ -0.37
TP53-227ENST00000622645 MARK3P27448 753 aa12.75□□□□□ -0.37
TP53-227ENST00000622645 TCF7P36402 384 aaPredicted RBP12.75□□□□□ -0.37
TP53-227ENST00000622645 SLCO1A2P46721 670 aa12.75□□□□□ -0.37
TP53-227ENST00000622645 NOMO3P69849 1222 aa12.75□□□□□ -0.37
TP53-227ENST00000622645 NCOA4Q13772 614 aa12.75□□□□□ -0.37
TP53-227ENST00000622645 B4GALNT4Q76KP1 1039 aa12.75□□□□□ -0.37
TP53-227ENST00000622645 HOOK3Q86VS8 718 aa12.75□□□□□ -0.37
TP53-227ENST00000622645 CGRRF1Q99675 332 aa12.75□□□□□ -0.37
TP53-227ENST00000622645 TCHPQ9BT92 498 aa12.75□□□□□ -0.37
TP53-227ENST00000622645 R3HDM2Q9Y2K5 976 aaKnown RBP12.75□□□□□ -0.37
TP53-227ENST00000622645 GMNCA6NCL1 334 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms