RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 DNAJC9Q8WXX5 260 aa13.24□□□□□ -0.29
LITAF-221ENST00000622633 BHMTQ93088 406 aa13.24□□□□□ -0.29
LITAF-221ENST00000622633 NACC2Q96BF6 587 aa13.24□□□□□ -0.29
LITAF-221ENST00000622633 GBP5Q96PP8 586 aa13.24□□□□□ -0.29
LITAF-221ENST00000622633 TRIM51Q9BSJ1 452 aa13.24□□□□□ -0.29
LITAF-221ENST00000622633 TAOK3Q9H2K8 898 aa13.24□□□□□ -0.29
LITAF-221ENST00000622633 SLITRK6Q9H5Y7 841 aa13.24□□□□□ -0.29
LITAF-221ENST00000622633 KIAA1522Q9P206 1035 aaPredicted RBP13.24□□□□□ -0.29
LITAF-221ENST00000622633 BCS1LQ9Y276 419 aa13.24□□□□□ -0.29
LITAF-221ENST00000622633 SMCHD1A6NHR9 2005 aa13.24□□□□□ -0.29
LITAF-221ENST00000622633 DDX3YO15523 660 aaKnown RBP13.24□□□□□ -0.29
LITAF-221ENST00000622633 ECE2O60344 883 aa13.24□□□□□ -0.29
LITAF-221ENST00000622633 GAS7O60861 476 aa13.24□□□□□ -0.29
LITAF-221ENST00000622633 TMEM253P0C7T8 217 aa13.24□□□□□ -0.29
LITAF-221ENST00000622633 TNFAIP3P21580 790 aa13.24□□□□□ -0.29
LITAF-221ENST00000622633 NFKBIAP25963 317 aa13.24□□□□□ -0.29
LITAF-221ENST00000622633 PSMC1P62191 440 aaKnown RBP13.24□□□□□ -0.29
LITAF-221ENST00000622633 PPP2R2AP63151 447 aa13.24□□□□□ -0.29
LITAF-221ENST00000622633 PPATQ06203 517 aa13.24□□□□□ -0.29
LITAF-221ENST00000622633 RCN1Q15293 331 aa13.24□□□□□ -0.29
LITAF-221ENST00000622633 ODR4Q5SWX8 454 aa13.24□□□□□ -0.29
LITAF-221ENST00000622633 DCAF12L1Q5VU92 463 aa13.24□□□□□ -0.29
LITAF-221ENST00000622633 ACER1Q8TDN7 264 aa13.24□□□□□ -0.29
LITAF-221ENST00000622633 FBF1Q8TES7 1133 aa13.24□□□□□ -0.29
LITAF-221ENST00000622633 RFFLQ8WZ73 363 aa13.24□□□□□ -0.29
LITAF-221ENST00000622633 SLC5A5Q92911 643 aa13.24□□□□□ -0.29
LITAF-221ENST00000622633 KLHL29Q96CT2 875 aa13.24□□□□□ -0.29
LITAF-221ENST00000622633 SYT11Q9BT88 431 aa13.24□□□□□ -0.29
LITAF-221ENST00000622633 RNPEPL1Q9HAU8 725 aa13.24□□□□□ -0.29
LITAF-221ENST00000622633 PFDN4Q9NQP4 134 aa13.24□□□□□ -0.29
LITAF-221ENST00000622633 FOXN3O00409 490 aaPredicted RBP13.23□□□□□ -0.29
LITAF-221ENST00000622633 LRRN2O75325 713 aa13.23□□□□□ -0.29
LITAF-221ENST00000622633 POLR2MP0CAP2 368 aa13.23□□□□□ -0.29
LITAF-221ENST00000622633 TPBGLP0DKB5 382 aa13.23□□□□□ -0.29
LITAF-221ENST00000622633 ARP10275 920 aa13.23□□□□□ -0.29
LITAF-221ENST00000622633 PRELPP51888 382 aa13.23□□□□□ -0.29
LITAF-221ENST00000622633 PPP2R5CQ13362 524 aa13.23□□□□□ -0.29
LITAF-221ENST00000622633 ZNF211Q13398 564 aaPredicted RBP13.23□□□□□ -0.29
LITAF-221ENST00000622633 CAMK2BQ13554 666 aa13.23□□□□□ -0.29
LITAF-221ENST00000622633 GALNTL6Q49A17 601 aa13.23□□□□□ -0.29
LITAF-221ENST00000622633 TTC30AQ86WT1 665 aa13.23□□□□□ -0.29
LITAF-221ENST00000622633 LENG1Q96BZ8 264 aaPredicted RBP13.23□□□□□ -0.29
LITAF-221ENST00000622633 MASTLQ96GX5 879 aa13.23□□□□□ -0.29
LITAF-221ENST00000622633 ZNF317Q96PQ6 595 aaPredicted RBP13.23□□□□□ -0.29
LITAF-221ENST00000622633 XPO6Q96QU8 1125 aaKnown RBP13.23□□□□□ -0.29
LITAF-221ENST00000622633 MKNK1Q9BUB5 465 aa13.23□□□□□ -0.29
LITAF-221ENST00000622633 PPP1R12CQ9BZL4 782 aa13.23□□□□□ -0.29
LITAF-221ENST00000622633 THAP2Q9H0W7 228 aa13.23□□□□□ -0.29
LITAF-221ENST00000622633 DMAC2Q9NW81 257 aa13.23□□□□□ -0.29
LITAF-221ENST00000622633 ARHGEF38Q9NXL2 777 aa13.23□□□□□ -0.29
LITAF-221ENST00000622633 HEY1Q9Y5J3 304 aa13.23□□□□□ -0.29
LITAF-221ENST00000622633 COMMD3-BMI1R4GMX3 469 aa13.23□□□□□ -0.29
LITAF-221ENST00000622633 NCANO14594 1321 aa13.23□□□□□ -0.29
LITAF-221ENST00000622633 ATP8B3O60423 1300 aa13.23□□□□□ -0.29
LITAF-221ENST00000622633 GBP1P32455 592 aa13.23□□□□□ -0.29
LITAF-221ENST00000622633 NEK2P51955 445 aa13.23□□□□□ -0.29
LITAF-221ENST00000622633 STAT2P52630 851 aa13.23□□□□□ -0.29
LITAF-221ENST00000622633 HPCAP84074 193 aa13.23□□□□□ -0.29
LITAF-221ENST00000622633 DHX9Q08211 1270 aaKnown RBP13.23□□□□□ -0.29
LITAF-221ENST00000622633 NFIL3Q16649 462 aa13.23□□□□□ -0.29
LITAF-221ENST00000622633 CFAP157Q5JU67 520 aa13.23□□□□□ -0.29
LITAF-221ENST00000622633 PHLDB3Q6NSJ2 640 aa13.23□□□□□ -0.29
LITAF-221ENST00000622633 COL23A1Q86Y22 540 aaPredicted RBP13.23□□□□□ -0.29
LITAF-221ENST00000622633 NLGN1Q8N2Q7 840 aa13.23□□□□□ -0.29
LITAF-221ENST00000622633 SLC17A8Q8NDX2 589 aa13.23□□□□□ -0.29
LITAF-221ENST00000622633 PRMT6Q96LA8 375 aaPredicted RBP13.23□□□□□ -0.29
LITAF-221ENST00000622633 NACC1Q96RE7 527 aa13.23□□□□□ -0.29
LITAF-221ENST00000622633 CSRNP1Q96S65 589 aa13.23□□□□□ -0.29
LITAF-221ENST00000622633 LRRC4CQ9HCJ2 640 aa13.23□□□□□ -0.29
LITAF-221ENST00000622633 APEX2Q9UBZ4 518 aa13.23□□□□□ -0.29
LITAF-221ENST00000622633 UTP11Q9Y3A2 253 aaKnown RBP13.23□□□□□ -0.29
LITAF-221ENST00000622633 ASAP2O43150 1006 aa13.22□□□□□ -0.29
LITAF-221ENST00000622633 EXOC3O60645 756 aa13.22□□□□□ -0.29
LITAF-221ENST00000622633 TPPPO94811 219 aa13.22□□□□□ -0.29
LITAF-221ENST00000622633 MTTPP55157 894 aa13.22□□□□□ -0.29
LITAF-221ENST00000622633 GEMIN4P57678 1058 aaKnown RBP13.22□□□□□ -0.29
LITAF-221ENST00000622633 MYL7Q01449 175 aa13.22□□□□□ -0.29
LITAF-221ENST00000622633 POU5F1Q01860 360 aaKnown RBP13.22□□□□□ -0.29
LITAF-221ENST00000622633 ODF2Q5BJF6 829 aa13.22□□□□□ -0.29
LITAF-221ENST00000622633 TMC3Q7Z5M5 1100 aa13.22□□□□□ -0.29
LITAF-221ENST00000622633 STKLD1Q8NE28 680 aa13.22□□□□□ -0.29
LITAF-221ENST00000622633 ASAP3Q8TDY4 903 aa13.22□□□□□ -0.29
LITAF-221ENST00000622633 ZNF577Q9BSK1 485 aa13.22□□□□□ -0.29
LITAF-221ENST00000622633 SERPINA10Q9UK55 444 aa13.22□□□□□ -0.29
LITAF-221ENST00000622633 COG5Q9UP83 839 aa13.22□□□□□ -0.29
LITAF-221ENST00000622633 USH1CQ9Y6N9 552 aa13.22□□□□□ -0.29
LITAF-221ENST00000622633 DDX39AO00148 427 aaKnown RBP13.22□□□□□ -0.29
LITAF-221ENST00000622633 PEX11AO75192 247 aa13.22□□□□□ -0.29
LITAF-221ENST00000622633 NPM3O75607 178 aaKnown RBP13.22□□□□□ -0.29
LITAF-221ENST00000622633 MMP10P09238 476 aa13.22□□□□□ -0.29
LITAF-221ENST00000622633 ZNF131P52739 623 aa13.22□□□□□ -0.29
LITAF-221ENST00000622633 KRT72Q14CN4 511 aa13.22□□□□□ -0.29
LITAF-221ENST00000622633 FAAH2Q6GMR7 532 aa13.22□□□□□ -0.29
LITAF-221ENST00000622633 ASRGL1Q7L266 308 aa13.22□□□□□ -0.29
LITAF-221ENST00000622633 PEX5LQ8IYB4 626 aa13.22□□□□□ -0.29
LITAF-221ENST00000622633 KCTD17Q8N5Z5 321 aa13.22□□□□□ -0.29
LITAF-221ENST00000622633 GLG1Q92896 1179 aa13.22□□□□□ -0.29
LITAF-221ENST00000622633 PCIF1Q9H4Z3 704 aa13.22□□□□□ -0.29
LITAF-221ENST00000622633 NOVA2Q9UNW9 492 aaKnown RBP13.22□□□□□ -0.29
LITAF-221ENST00000622633 ANKRD31Q8N7Z5 1873 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms