RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 PTENP60484 403 aa13.62□□□□□ -0.23
MSH6-215ENST00000622629 PDE1BQ01064 536 aa13.62□□□□□ -0.23
MSH6-215ENST00000622629 FAM49AQ9H0Q0 323 aaPredicted RBP13.62□□□□□ -0.23
MSH6-215ENST00000622629 ARHGAP42A6NI28 874 aa13.62□□□□□ -0.23
MSH6-215ENST00000622629 CPP00450 1065 aa13.62□□□□□ -0.23
MSH6-215ENST00000622629 ARL1P40616 181 aaPredicted RBP13.62□□□□□ -0.23
MSH6-215ENST00000622629 PRKCIP41743 596 aa13.62□□□□□ -0.23
MSH6-215ENST00000622629 ZNF844Q08AG5 666 aa13.62□□□□□ -0.23
MSH6-215ENST00000622629 MUM1Q2TAK8 710 aa13.62□□□□□ -0.23
MSH6-215ENST00000622629 SPOPLQ6IQ16 392 aa13.62□□□□□ -0.23
MSH6-215ENST00000622629 TRMT10CQ7L0Y3 403 aaKnown RBP13.62□□□□□ -0.23
MSH6-215ENST00000622629 SDCCAG8Q86SQ7 713 aaPredicted RBP13.62□□□□□ -0.23
MSH6-215ENST00000622629 CCDC125Q86Z20 511 aa13.62□□□□□ -0.23
MSH6-215ENST00000622629 C4orf33Q8N1A6 199 aa13.62□□□□□ -0.23
MSH6-215ENST00000622629 PDCD2LQ9BRP1 358 aa13.62□□□□□ -0.23
MSH6-215ENST00000622629 ALG13Q9NP73 1137 aaKnown RBP13.62□□□□□ -0.23
MSH6-215ENST00000622629 FRMPD4Q14CM0 1322 aa13.62□□□□□ -0.23
MSH6-215ENST00000622629 AHDC1Q5TGY3 1603 aaPredicted RBP13.62□□□□□ -0.23
MSH6-215ENST00000622629 BAZ2AQ9UIF9 1905 aaKnown RBP13.62□□□□□ -0.23
MSH6-215ENST00000622629 CDH16O75309 829 aa13.62□□□□□ -0.23
MSH6-215ENST00000622629 PSMD10O75832 226 aa13.62□□□□□ -0.23
MSH6-215ENST00000622629 VIL1P09327 827 aaKnown RBP13.62□□□□□ -0.23
MSH6-215ENST00000622629 PPP2R5CQ13362 524 aa13.62□□□□□ -0.23
MSH6-215ENST00000622629 PHLDB3Q6NSJ2 640 aa13.62□□□□□ -0.23
MSH6-215ENST00000622629 GBP7Q8N8V2 638 aaPredicted RBP13.62□□□□□ -0.23
MSH6-215ENST00000622629 RBM46Q8TBY0 533 aaKnown RBP13.62□□□□□ -0.23
MSH6-215ENST00000622629 FAF2Q96CS3 445 aa13.62□□□□□ -0.23
MSH6-215ENST00000622629 MED10Q9BTT4 135 aa13.62□□□□□ -0.23
MSH6-215ENST00000622629 IGSF9BQ9UPX0 1349 aa13.62□□□□□ -0.23
MSH6-215ENST00000622629 PYGMP11217 842 aa13.61□□□□□ -0.23
MSH6-215ENST00000622629 ACTR2P61160 394 aa13.61□□□□□ -0.23
MSH6-215ENST00000622629 MKRN3Q13064 507 aaKnown RBP13.61□□□□□ -0.23
MSH6-215ENST00000622629 Q3C1V9 767 aa13.61□□□□□ -0.23
MSH6-215ENST00000622629 CFAP61Q8NHU2 1237 aa13.61□□□□□ -0.23
MSH6-215ENST00000622629 HSD17B14Q9BPX1 270 aa13.61□□□□□ -0.23
MSH6-215ENST00000622629 ETNK1Q9HBU6 452 aa13.61□□□□□ -0.23
MSH6-215ENST00000622629 H0Y3Z8 333 aa13.61□□□□□ -0.23
MSH6-215ENST00000622629 GZMAP12544 262 aa13.61□□□□□ -0.23
MSH6-215ENST00000622629 TMC3Q7Z5M5 1100 aa13.61□□□□□ -0.23
MSH6-215ENST00000622629 DPP9Q86TI2 863 aa13.61□□□□□ -0.23
MSH6-215ENST00000622629 LNX1Q8TBB1 728 aaPredicted RBP13.61□□□□□ -0.23
MSH6-215ENST00000622629 RPS6KC1Q96S38 1066 aa13.61□□□□□ -0.23
MSH6-215ENST00000622629 MYCBPQ99417 103 aaPredicted RBP13.61□□□□□ -0.23
MSH6-215ENST00000622629 BCAS3Q9H6U6 928 aa13.61□□□□□ -0.23
MSH6-215ENST00000622629 AGO4Q9HCK5 861 aaKnown RBP13.61□□□□□ -0.23
MSH6-215ENST00000622629 M0QYV0 167 aa13.61□□□□□ -0.23
MSH6-215ENST00000622629 MAPK13O15264 365 aa13.61□□□□□ -0.23
MSH6-215ENST00000622629 BAG2O95816 211 aa13.61□□□□□ -0.23
MSH6-215ENST00000622629 CALCAP01258 141 aa13.61□□□□□ -0.23
MSH6-215ENST00000622629 KRT3P12035 628 aa13.61□□□□□ -0.23
MSH6-215ENST00000622629 SMAD1Q15797 465 aaKnown RBP13.61□□□□□ -0.23
MSH6-215ENST00000622629 SMTNL2Q2TAL5 461 aa13.61□□□□□ -0.23
MSH6-215ENST00000622629 FAM102AQ5T9C2 384 aaPredicted RBP13.61□□□□□ -0.23
MSH6-215ENST00000622629 LRRC71Q8N4P6 559 aa13.61□□□□□ -0.23
MSH6-215ENST00000622629 KRT10P13645 584 aa13.6□□□□□ -0.23
MSH6-215ENST00000622629 IFRD2Q12894 506 aaPredicted RBP13.6□□□□□ -0.23
MSH6-215ENST00000622629 ZCWPW2Q504Y3 356 aa13.6□□□□□ -0.23
MSH6-215ENST00000622629 LRRC34Q8IZ02 419 aa13.6□□□□□ -0.23
MSH6-215ENST00000622629 OTUD5Q96G74 571 aa13.6□□□□□ -0.23
MSH6-215ENST00000622629 SENP7Q9BQF6 1050 aa13.6□□□□□ -0.23
MSH6-215ENST00000622629 TXLNGQ9NUQ3 528 aa13.6□□□□□ -0.23
MSH6-215ENST00000622629 FBXO40Q9UH90 709 aa13.6□□□□□ -0.23
MSH6-215ENST00000622629 F5H423 210 aaPredicted RBP13.6□□□□□ -0.23
MSH6-215ENST00000622629 GTF2H1P32780 548 aa13.6□□□□□ -0.23
MSH6-215ENST00000622629 PARP9Q8IXQ6 854 aa13.6□□□□□ -0.23
MSH6-215ENST00000622629 OR6B3Q8NGW1 331 aa13.6□□□□□ -0.23
MSH6-215ENST00000622629 NEU2Q9Y3R4 380 aa13.6□□□□□ -0.23
MSH6-215ENST00000622629 CASZ1Q86V15 1759 aa13.6□□□□□ -0.23
MSH6-215ENST00000622629 CCDC160A6NGH7 325 aa13.6□□□□□ -0.23
MSH6-215ENST00000622629 MUTP22033 750 aa13.6□□□□□ -0.23
MSH6-215ENST00000622629 HYIQ5T013 277 aa13.6□□□□□ -0.23
MSH6-215ENST00000622629 ANGEL2Q5VTE6 544 aaKnown RBP13.6□□□□□ -0.23
MSH6-215ENST00000622629 N4BP2L2Q92802 583 aaPredicted RBP13.6□□□□□ -0.23
MSH6-215ENST00000622629 STRIP2Q9ULQ0 834 aa13.6□□□□□ -0.23
MSH6-215ENST00000622629 PRKCBP05771 671 aa13.6□□□□□ -0.23
MSH6-215ENST00000622629 CYP3A4P08684 503 aa13.6□□□□□ -0.23
MSH6-215ENST00000622629 HNRNPH1P31943 449 aaKnown RBP13.6□□□□□ -0.23
MSH6-215ENST00000622629 CXCL9Q07325 125 aa13.6□□□□□ -0.23
MSH6-215ENST00000622629 NOP9Q86U38 636 aaKnown RBP13.6□□□□□ -0.23
MSH6-215ENST00000622629 PPM1NQ8N819 430 aa13.6□□□□□ -0.23
MSH6-215ENST00000622629 MAML1Q92585 1016 aa13.6□□□□□ -0.23
MSH6-215ENST00000622629 FAM84AQ96KN4 292 aa13.6□□□□□ -0.23
MSH6-215ENST00000622629 FAM167AQ96KS9 214 aa13.6□□□□□ -0.23
MSH6-215ENST00000622629 LRRC37BQ96QE4 947 aa13.6□□□□□ -0.23
MSH6-215ENST00000622629 CYP26B1Q9NR63 512 aa13.6□□□□□ -0.23
MSH6-215ENST00000622629 EXTL3O43909 919 aa13.59□□□□□ -0.23
MSH6-215ENST00000622629 KRT7P08729 469 aa13.59□□□□□ -0.23
MSH6-215ENST00000622629 VCAM1P19320 739 aa13.59□□□□□ -0.23
MSH6-215ENST00000622629 STAT4Q14765 748 aa13.59□□□□□ -0.23
MSH6-215ENST00000622629 SPATA21Q7Z572 469 aa13.59□□□□□ -0.23
MSH6-215ENST00000622629 TTC13Q8NBP0 860 aa13.59□□□□□ -0.23
MSH6-215ENST00000622629 TTC25Q96NG3 672 aa13.59□□□□□ -0.23
MSH6-215ENST00000622629 PURBQ96QR8 312 aaKnown RBP13.59□□□□□ -0.23
MSH6-215ENST00000622629 TRABDQ9H4I3 376 aa13.59□□□□□ -0.23
MSH6-215ENST00000622629 ECT2Q9H8V3 914 aa13.59□□□□□ -0.23
MSH6-215ENST00000622629 ITGB5P18084 799 aa13.59□□□□□ -0.23
MSH6-215ENST00000622629 MARCKSL1P49006 195 aa13.59□□□□□ -0.23
MSH6-215ENST00000622629 FNTAP49354 379 aa13.59□□□□□ -0.23
MSH6-215ENST00000622629 CDH6P55285 790 aa13.59□□□□□ -0.23
MSH6-215ENST00000622629 HIF1AQ16665 826 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms