RNA–Protein interactions for RNA: ENST00000622171.1

LINC00649-219, long intergenic non-protein coding RNA 649, human

TSL 5

Gene LINC00649, Length 207 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00649-219	ENST00000622171	ENOX2	Q16206	610 aa	Known RBP	4.87	□□□□□ -1.63
LINC00649-219	ENST00000622171	PTPN21	Q16825	1174 aa		4.87	□□□□□ -1.63
LINC00649-219	ENST00000622171	SLC5A9	Q2M3M2	681 aa		4.87	□□□□□ -1.63
LINC00649-219	ENST00000622171	SLC10A6	Q3KNW5	377 aa		4.87	□□□□□ -1.63
LINC00649-219	ENST00000622171	USP41	Q3LFD5	358 aa		4.87	□□□□□ -1.63
LINC00649-219	ENST00000622171	PUS10	Q3MIT2	529 aa	Known RBP	4.87	□□□□□ -1.63
LINC00649-219	ENST00000622171	VARS2	Q5ST30	1063 aa	Known RBP	4.87	□□□□□ -1.63
LINC00649-219	ENST00000622171	HYI	Q5T013	277 aa		4.87	□□□□□ -1.63
LINC00649-219	ENST00000622171	RRAGB	Q5VZM2	374 aa		4.87	□□□□□ -1.63
LINC00649-219	ENST00000622171	JADE1	Q6IE81	842 aa		4.87	□□□□□ -1.63
LINC00649-219	ENST00000622171	POTEH	Q6S545	545 aa		4.87	□□□□□ -1.63
LINC00649-219	ENST00000622171	TRIM67	Q6ZTA4	783 aa		4.87	□□□□□ -1.63
LINC00649-219	ENST00000622171	CCDC149	Q6ZUS6	474 aa		4.87	□□□□□ -1.63
LINC00649-219	ENST00000622171	NELFCD	Q8IXH7	590 aa		4.87	□□□□□ -1.63
LINC00649-219	ENST00000622171	EFCAB13	Q8IY85	973 aa		4.87	□□□□□ -1.63
LINC00649-219	ENST00000622171	RNF168	Q8IYW5	571 aa	Predicted RBP	4.87	□□□□□ -1.63
LINC00649-219	ENST00000622171	HS6ST3	Q8IZP7	471 aa		4.87	□□□□□ -1.63
LINC00649-219	ENST00000622171	PRSS33	Q8NF86	280 aa		4.87	□□□□□ -1.63
LINC00649-219	ENST00000622171	ITFG1	Q8TB96	612 aa		4.87	□□□□□ -1.63
LINC00649-219	ENST00000622171	LNX1	Q8TBB1	728 aa	Predicted RBP	4.87	□□□□□ -1.63
LINC00649-219	ENST00000622171	GPR152	Q8TDT2	470 aa		4.87	□□□□□ -1.63
LINC00649-219	ENST00000622171	DDX12P	Q92771	950 aa		4.87	□□□□□ -1.63
LINC00649-219	ENST00000622171	PBXIP1	Q96AQ6	731 aa		4.87	□□□□□ -1.63
LINC00649-219	ENST00000622171	TCEAL4	Q96EI5	215 aa		4.87	□□□□□ -1.63
LINC00649-219	ENST00000622171	PRIMPOL	Q96LW4	560 aa		4.87	□□□□□ -1.63
LINC00649-219	ENST00000622171	RIPOR3	Q96MK2	946 aa		4.87	□□□□□ -1.63
LINC00649-219	ENST00000622171	ACAP3	Q96P50	834 aa		4.87	□□□□□ -1.63
LINC00649-219	ENST00000622171	POP1	Q99575	1024 aa	Known RBP	4.87	□□□□□ -1.63
LINC00649-219	ENST00000622171	CDCA3	Q99618	268 aa	Predicted RBP	4.87	□□□□□ -1.63
LINC00649-219	ENST00000622171	TTPAL	Q9BTX7	342 aa		4.87	□□□□□ -1.63
LINC00649-219	ENST00000622171	MSTO1	Q9BUK6	570 aa		4.87	□□□□□ -1.63
LINC00649-219	ENST00000622171	C1QTNF1	Q9BXJ1	281 aa		4.87	□□□□□ -1.63
LINC00649-219	ENST00000622171	NT5C3A	Q9H0P0	336 aa		4.87	□□□□□ -1.63
LINC00649-219	ENST00000622171	PARVG	Q9HBI0	331 aa		4.87	□□□□□ -1.63
LINC00649-219	ENST00000622171	PTPRH	Q9HD43	1115 aa		4.87	□□□□□ -1.63
LINC00649-219	ENST00000622171	DZANK1	Q9NVP4	752 aa		4.87	□□□□□ -1.63
LINC00649-219	ENST00000622171	KANSL3	Q9P2N6	904 aa		4.87	□□□□□ -1.63
LINC00649-219	ENST00000622171	PRKAG3	Q9UGI9	489 aa		4.87	□□□□□ -1.63
LINC00649-219	ENST00000622171	TBX20	Q9UMR3	447 aa		4.87	□□□□□ -1.63
LINC00649-219	ENST00000622171	HCN4	Q9Y3Q4	1203 aa		4.87	□□□□□ -1.63
LINC00649-219	ENST00000622171	NUB1	Q9Y5A7	615 aa		4.87	□□□□□ -1.63
LINC00649-219	ENST00000622171	PTPRZ1	P23471	2315 aa	Predicted RBP	4.87	□□□□□ -1.63
LINC00649-219	ENST00000622171	NCAN	O14594	1321 aa		4.87	□□□□□ -1.63
LINC00649-219	ENST00000622171	EP300	Q09472	2414 aa	Predicted RBP	4.87	□□□□□ -1.63
LINC00649-219	ENST00000622171	ZMYM2	Q9UBW7	1377 aa		4.87	□□□□□ -1.63
LINC00649-219	ENST00000622171	STK25	O00506	426 aa		4.86	□□□□□ -1.63
LINC00649-219	ENST00000622171	CLIC2	O15247	247 aa		4.86	□□□□□ -1.63
LINC00649-219	ENST00000622171	SPTLC2	O15270	562 aa		4.86	□□□□□ -1.63
LINC00649-219	ENST00000622171	CLDN3	O15551	220 aa		4.86	□□□□□ -1.63
LINC00649-219	ENST00000622171	TRAK2	O60296	914 aa		4.86	□□□□□ -1.63
LINC00649-219	ENST00000622171	FAM189A1	O60320	539 aa		4.86	□□□□□ -1.63
LINC00649-219	ENST00000622171	VNN2	O95498	520 aa		4.86	□□□□□ -1.63
LINC00649-219	ENST00000622171	EFEMP2	O95967	443 aa		4.86	□□□□□ -1.63
LINC00649-219	ENST00000622171	F13A1	P00488	732 aa		4.86	□□□□□ -1.63
LINC00649-219	ENST00000622171	PRR29	P0C7W0	189 aa		4.86	□□□□□ -1.63
LINC00649-219	ENST00000622171	MCF2	P10911	925 aa		4.86	□□□□□ -1.63
LINC00649-219	ENST00000622171	CD72	P21854	359 aa		4.86	□□□□□ -1.63
LINC00649-219	ENST00000622171	PROZ	P22891	400 aa		4.86	□□□□□ -1.63
LINC00649-219	ENST00000622171	ACAT1	P24752	427 aa	Known RBP	4.86	□□□□□ -1.63
LINC00649-219	ENST00000622171	MTHFR	P42898	656 aa		4.86	□□□□□ -1.63
LINC00649-219	ENST00000622171	GPR15	P49685	360 aa		4.86	□□□□□ -1.63
LINC00649-219	ENST00000622171	CYP2J2	P51589	502 aa		4.86	□□□□□ -1.63
LINC00649-219	ENST00000622171	SMTN	P53814	917 aa		4.86	□□□□□ -1.63
LINC00649-219	ENST00000622171	ASIC1	P78348	528 aa		4.86	□□□□□ -1.63
LINC00649-219	ENST00000622171	PPP2R3A	Q06190	1150 aa		4.86	□□□□□ -1.63
LINC00649-219	ENST00000622171	POU5F1B	Q06416	359 aa		4.86	□□□□□ -1.63
LINC00649-219	ENST00000622171	GRM2	Q14416	872 aa		4.86	□□□□□ -1.63
LINC00649-219	ENST00000622171	BMS1	Q14692	1282 aa	Known RBP	4.86	□□□□□ -1.63
LINC00649-219	ENST00000622171	UPP1	Q16831	310 aa		4.86	□□□□□ -1.63
LINC00649-219	ENST00000622171	CTXN3	Q4LDR2	81 aa		4.86	□□□□□ -1.63
LINC00649-219	ENST00000622171	HERC4	Q5GLZ8	1057 aa	Predicted RBP	4.86	□□□□□ -1.63
LINC00649-219	ENST00000622171	PPM1L	Q5SGD2	360 aa		4.86	□□□□□ -1.63
LINC00649-219	ENST00000622171	ATAT1	Q5SQI0	421 aa		4.86	□□□□□ -1.63
LINC00649-219	ENST00000622171	AXDND1	Q5T1B0	1012 aa	Predicted RBP	4.86	□□□□□ -1.63
LINC00649-219	ENST00000622171	STXBP5	Q5T5C0	1151 aa		4.86	□□□□□ -1.63
LINC00649-219	ENST00000622171	LIN9	Q5TKA1	542 aa		4.86	□□□□□ -1.63
LINC00649-219	ENST00000622171	SDHAF4	Q5VUM1	108 aa		4.86	□□□□□ -1.63
LINC00649-219	ENST00000622171	ARL6IP4	Q66PJ3	421 aa	Known RBP	4.86	□□□□□ -1.63
LINC00649-219	ENST00000622171	ADAL	Q6DHV7	355 aa		4.86	□□□□□ -1.63
LINC00649-219	ENST00000622171	PDE12	Q6L8Q7	609 aa	Known RBP	4.86	□□□□□ -1.63
LINC00649-219	ENST00000622171	SHC4	Q6S5L8	630 aa		4.86	□□□□□ -1.63
LINC00649-219	ENST00000622171	RNF19B	Q6ZMZ0	732 aa		4.86	□□□□□ -1.63
LINC00649-219	ENST00000622171	GPR149	Q86SP6	731 aa		4.86	□□□□□ -1.63
LINC00649-219	ENST00000622171	SIX5	Q8N196	739 aa		4.86	□□□□□ -1.63
LINC00649-219	ENST00000622171	ZNF710	Q8N1W2	664 aa		4.86	□□□□□ -1.63
LINC00649-219	ENST00000622171	KRI1	Q8N9T8	703 aa	Known RBP	4.86	□□□□□ -1.63
LINC00649-219	ENST00000622171	TTC8	Q8TAM2	541 aa		4.86	□□□□□ -1.63
LINC00649-219	ENST00000622171	RSPH1	Q8WYR4	309 aa		4.86	□□□□□ -1.63
LINC00649-219	ENST00000622171	POMGNT1	Q8WZA1	660 aa		4.86	□□□□□ -1.63
LINC00649-219	ENST00000622171	EDA	Q92838	391 aa		4.86	□□□□□ -1.63
LINC00649-219	ENST00000622171	FGF14	Q92915	247 aa		4.86	□□□□□ -1.63
LINC00649-219	ENST00000622171	DNAJC19	Q96DA6	116 aa		4.86	□□□□□ -1.63
LINC00649-219	ENST00000622171	FAM122A	Q96E09	287 aa		4.86	□□□□□ -1.63
LINC00649-219	ENST00000622171	MCRS1	Q96EZ8	462 aa		4.86	□□□□□ -1.63
LINC00649-219	ENST00000622171	FIZ1	Q96SL8	496 aa		4.86	□□□□□ -1.63
LINC00649-219	ENST00000622171	LPIN3	Q9BQK8	851 aa		4.86	□□□□□ -1.63
LINC00649-219	ENST00000622171	CORO1B	Q9BR76	489 aa		4.86	□□□□□ -1.63
LINC00649-219	ENST00000622171	CBWD1	Q9BRT8	395 aa		4.86	□□□□□ -1.63
LINC00649-219	ENST00000622171	FAM213A	Q9BRX8	229 aa		4.86	□□□□□ -1.63
LINC00649-219	ENST00000622171	RHOBTB2	Q9BYZ6	727 aa		4.86	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms