RNA–Protein interactions for RNA: ENST00000621973.1

DDX1-208, Transcript of DEAD-box helicase 1, humanhuman

TSL 5 BASIC

Gene DDX1, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-208ENST00000621973 FBXO47Q5MNV8 452 aa7.03□□□□□ -1.28
DDX1-208ENST00000621973 ZMYM1Q5SVZ6 1142 aa7.03□□□□□ -1.28
DDX1-208ENST00000621973 Q6ZUG5 572 aa7.03□□□□□ -1.28
DDX1-208ENST00000621973 SYT9Q86SS6 491 aa7.03□□□□□ -1.28
DDX1-208ENST00000621973 CCDC144CPQ8IYA2 1237 aa7.03□□□□□ -1.28
DDX1-208ENST00000621973 PHACTR4Q8IZ21 702 aa7.03□□□□□ -1.28
DDX1-208ENST00000621973 TDRD7Q8NHU6 1098 aaKnown RBP7.03□□□□□ -1.28
DDX1-208ENST00000621973 PCDH19Q8TAB3 1148 aa7.03□□□□□ -1.28
DDX1-208ENST00000621973 GTF3C6Q969F1 213 aa7.03□□□□□ -1.28
DDX1-208ENST00000621973 COA7Q96BR5 231 aa7.03□□□□□ -1.28
DDX1-208ENST00000621973 PAG1Q9NWQ8 432 aa7.03□□□□□ -1.28
DDX1-208ENST00000621973 NAGPAQ9UK23 515 aa7.03□□□□□ -1.28
DDX1-208ENST00000621973 SOX1O00570 391 aaPredicted RBP7.03□□□□□ -1.28
DDX1-208ENST00000621973 PPM1BO75688 479 aa7.03□□□□□ -1.28
DDX1-208ENST00000621973 CHGBP05060 677 aa7.03□□□□□ -1.28
DDX1-208ENST00000621973 PARP1P09874 1014 aaKnown RBP7.03□□□□□ -1.28
DDX1-208ENST00000621973 EPHA1P21709 976 aa7.03□□□□□ -1.28
DDX1-208ENST00000621973 GRK4P32298 578 aa7.03□□□□□ -1.28
DDX1-208ENST00000621973 ECI1P42126 302 aa7.03□□□□□ -1.28
DDX1-208ENST00000621973 POLD2P49005 469 aa7.03□□□□□ -1.28
DDX1-208ENST00000621973 RCAN1P53805 252 aa7.03□□□□□ -1.28
DDX1-208ENST00000621973 UBXN2AP68543 259 aa7.03□□□□□ -1.28
DDX1-208ENST00000621973 CREMQ03060 361 aa7.03□□□□□ -1.28
DDX1-208ENST00000621973 ARL13BQ3SXY8 428 aa7.03□□□□□ -1.28
DDX1-208ENST00000621973 LRRC24Q50LG9 513 aa7.03□□□□□ -1.28
DDX1-208ENST00000621973 CDC37L1Q7L3B6 337 aa7.03□□□□□ -1.28
DDX1-208ENST00000621973 SDCCAG8Q86SQ7 713 aaPredicted RBP7.03□□□□□ -1.28
DDX1-208ENST00000621973 MOGAT3Q86VF5 341 aa7.03□□□□□ -1.28
DDX1-208ENST00000621973 SIAH1Q8IUQ4 282 aa7.03□□□□□ -1.28
DDX1-208ENST00000621973 SPNS2Q8IVW8 549 aa7.03□□□□□ -1.28
DDX1-208ENST00000621973 CISD2Q8N5K1 135 aaKnown RBP7.03□□□□□ -1.28
DDX1-208ENST00000621973 ZNF837Q96EG3 531 aaPredicted RBP7.03□□□□□ -1.28
DDX1-208ENST00000621973 APIPQ96GX9 242 aa7.03□□□□□ -1.28
DDX1-208ENST00000621973 TEX13AQ9BXU3 409 aaPredicted RBP7.03□□□□□ -1.28
DDX1-208ENST00000621973 NKX2-4Q9H2Z4 354 aa7.03□□□□□ -1.28
DDX1-208ENST00000621973 WHRNQ9P202 907 aa7.03□□□□□ -1.28
DDX1-208ENST00000621973 BLOC1S6Q9UL45 172 aa7.03□□□□□ -1.28
DDX1-208ENST00000621973 SIK3Q9Y2K2 1263 aa7.03□□□□□ -1.28
DDX1-208ENST00000621973 GPR45Q9Y5Y3 372 aa7.03□□□□□ -1.28
DDX1-208ENST00000621973 RNF113AO15541 343 aaKnown RBP7.02□□□□□ -1.29
DDX1-208ENST00000621973 KDM1AO60341 852 aa7.02□□□□□ -1.29
DDX1-208ENST00000621973 PFKFB2O60825 505 aa7.02□□□□□ -1.29
DDX1-208ENST00000621973 GJB3O75712 270 aa7.02□□□□□ -1.29
DDX1-208ENST00000621973 B3GALNT1O75752 331 aa7.02□□□□□ -1.29
DDX1-208ENST00000621973 SLC9A1P19634 815 aa7.02□□□□□ -1.29
DDX1-208ENST00000621973 CD247P20963 164 aa7.02□□□□□ -1.29
DDX1-208ENST00000621973 MAPK4P31152 587 aa7.02□□□□□ -1.29
DDX1-208ENST00000621973 HSPA2P54652 639 aa7.02□□□□□ -1.29
DDX1-208ENST00000621973 PIP4K2BP78356 416 aa7.02□□□□□ -1.29
DDX1-208ENST00000621973 MRPS35P82673 323 aaKnown RBP7.02□□□□□ -1.29
DDX1-208ENST00000621973 SMAD3P84022 425 aaKnown RBP7.02□□□□□ -1.29
DDX1-208ENST00000621973 AP1B1Q10567 949 aa7.02□□□□□ -1.29
DDX1-208ENST00000621973 SNX17Q15036 470 aa7.02□□□□□ -1.29
DDX1-208ENST00000621973 MMEL1Q495T6 779 aa7.02□□□□□ -1.29
DDX1-208ENST00000621973 TTC31Q49AM3 519 aaPredicted RBP7.02□□□□□ -1.29
DDX1-208ENST00000621973 TOR2AQ5JU69 321 aa7.02□□□□□ -1.29
DDX1-208ENST00000621973 STOX1Q6ZVD7 989 aa7.02□□□□□ -1.29
DDX1-208ENST00000621973 EPHX4Q8IUS5 362 aa7.02□□□□□ -1.29
DDX1-208ENST00000621973 ARHGEF39Q8N4T4 335 aa7.02□□□□□ -1.29
DDX1-208ENST00000621973 PYM1Q9BRP8 204 aaKnown RBP7.02□□□□□ -1.29
DDX1-208ENST00000621973 LLPHQ9BRT6 129 aaKnown RBP7.02□□□□□ -1.29
DDX1-208ENST00000621973 PLA2G12BQ9BX93 195 aa7.02□□□□□ -1.29
DDX1-208ENST00000621973 SCAND2PQ9GZW5 306 aaPredicted RBP7.02□□□□□ -1.29
DDX1-208ENST00000621973 GBP3Q9H0R5 595 aa7.02□□□□□ -1.29
DDX1-208ENST00000621973 SMG9Q9H0W8 520 aaKnown RBP7.02□□□□□ -1.29
DDX1-208ENST00000621973 VPS33BQ9H267 617 aa7.02□□□□□ -1.29
DDX1-208ENST00000621973 ZWILCHQ9H900 591 aa7.02□□□□□ -1.29
DDX1-208ENST00000621973 JMJD4Q9H9V9 463 aa7.02□□□□□ -1.29
DDX1-208ENST00000621973 TRPV4Q9HBA0 871 aa7.02□□□□□ -1.29
DDX1-208ENST00000621973 PIH1D1Q9NWS0 290 aaKnown RBP7.02□□□□□ -1.29
DDX1-208ENST00000621973 TMOD4Q9NZQ9 345 aa7.02□□□□□ -1.29
DDX1-208ENST00000621973 C19orf53Q9UNZ5 99 aaPredicted RBP7.02□□□□□ -1.29
DDX1-208ENST00000621973 NOC2LQ9Y3T9 749 aaKnown RBP7.02□□□□□ -1.29
DDX1-208ENST00000621973 SHANK3Q9BYB0 1731 aa7.02□□□□□ -1.29
DDX1-208ENST00000621973 A0A1B0GUL7 405 aa7.02□□□□□ -1.29
DDX1-208ENST00000621973 FOXN3O00409 490 aaPredicted RBP7.02□□□□□ -1.29
DDX1-208ENST00000621973 SIN3BO75182 1162 aa7.02□□□□□ -1.29
DDX1-208ENST00000621973 SGPL1O95470 568 aa7.02□□□□□ -1.29
DDX1-208ENST00000621973 PCCAP05165 728 aaPredicted RBP7.02□□□□□ -1.29
DDX1-208ENST00000621973 ATP2B3Q16720 1220 aa7.02□□□□□ -1.29
DDX1-208ENST00000621973 TSTQ16762 297 aaKnown RBP7.02□□□□□ -1.29
DDX1-208ENST00000621973 ZNF468Q5VIY5 522 aaPredicted RBP7.02□□□□□ -1.29
DDX1-208ENST00000621973 LBX2Q6XYB7 198 aa7.02□□□□□ -1.29
DDX1-208ENST00000621973 HDXQ7Z353 690 aa7.02□□□□□ -1.29
DDX1-208ENST00000621973 SMARCC2Q8TAQ2 1214 aa7.02□□□□□ -1.29
DDX1-208ENST00000621973 DCAF4Q8WV16 495 aa7.02□□□□□ -1.29
DDX1-208ENST00000621973 BRI3BPQ8WY22 251 aa7.02□□□□□ -1.29
DDX1-208ENST00000621973 ZUFSPQ96AP4 578 aa7.02□□□□□ -1.29
DDX1-208ENST00000621973 RCC1LQ96I51 464 aaKnown RBP7.02□□□□□ -1.29
DDX1-208ENST00000621973 YME1L1Q96TA2 773 aa7.02□□□□□ -1.29
DDX1-208ENST00000621973 NCAPGQ9BPX3 1015 aa7.02□□□□□ -1.29
DDX1-208ENST00000621973 PHF20Q9BVI0 1012 aa7.02□□□□□ -1.29
DDX1-208ENST00000621973 PUS3Q9BZE2 481 aaKnown RBP7.02□□□□□ -1.29
DDX1-208ENST00000621973 SOX17Q9H6I2 414 aaPredicted RBP7.02□□□□□ -1.29
DDX1-208ENST00000621973 ZMAT3Q9HA38 289 aaKnown RBP7.02□□□□□ -1.29
DDX1-208ENST00000621973 RABL2AQ9UBK7 228 aaPredicted RBP7.02□□□□□ -1.29
DDX1-208ENST00000621973 ZHX1Q9UKY1 873 aaPredicted RBP7.02□□□□□ -1.29
DDX1-208ENST00000621973 SPEF2Q9C093 1822 aa7.01□□□□□ -1.29
DDX1-208ENST00000621973 AQP12BA6NM10 295 aa7.01□□□□□ -1.29
DDX1-208ENST00000621973 FAM177BA6PVY3 158 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms