RNA–Protein interactions for RNA: ENST00000621269.4

ATXN3-253, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-253ENST00000621269 LIG4P49917 911 aa26.2■■□□□ 1.78
ATXN3-253ENST00000621269 NTHL1P78549 312 aa26.2■■□□□ 1.78
ATXN3-253ENST00000621269 MCM6Q14566 821 aa26.2■■□□□ 1.78
ATXN3-253ENST00000621269 VARS2Q5ST30 1063 aaKnown RBP26.2■■□□□ 1.78
ATXN3-253ENST00000621269 RAD54LQ92698 747 aa26.2■■□□□ 1.78
ATXN3-253ENST00000621269 ZHX3Q9H4I2 956 aa26.2■■□□□ 1.78
ATXN3-253ENST00000621269 PLEKHA5Q9HAU0 1116 aa26.2■■□□□ 1.78
ATXN3-253ENST00000621269 PARVGQ9HBI0 331 aa26.2■■□□□ 1.78
ATXN3-253ENST00000621269 BLOC1S4Q9NUP1 217 aa26.2■■□□□ 1.78
ATXN3-253ENST00000621269 WNT16Q9UBV4 365 aa26.2■■□□□ 1.78
ATXN3-253ENST00000621269 H0Y858 1186 aa26.19■■□□□ 1.78
ATXN3-253ENST00000621269 K7ENM7 598 aa26.19■■□□□ 1.78
ATXN3-253ENST00000621269 MEFVO15553 781 aaPredicted RBP26.19■■□□□ 1.78
ATXN3-253ENST00000621269 POU2F2P09086 479 aa26.19■■□□□ 1.78
ATXN3-253ENST00000621269 CLTAP09496 248 aa26.19■■□□□ 1.78
ATXN3-253ENST00000621269 SRFP11831 508 aa26.19■■□□□ 1.78
ATXN3-253ENST00000621269 GRIN1Q05586 938 aa26.19■■□□□ 1.78
ATXN3-253ENST00000621269 CDH7Q9ULB5 785 aa26.19■■□□□ 1.78
ATXN3-253ENST00000621269 TBX20Q9UMR3 447 aa26.19■■□□□ 1.78
ATXN3-253ENST00000621269 VWA8A3KMH1 1905 aa26.18■■□□□ 1.78
ATXN3-253ENST00000621269 ANHXE9PGG2 379 aa26.18■■□□□ 1.78
ATXN3-253ENST00000621269 STK25O00506 426 aa26.18■■□□□ 1.78
ATXN3-253ENST00000621269 HNRNPDLO14979 420 aaKnown RBP26.18■■□□□ 1.78
ATXN3-253ENST00000621269 TBCAO75347 108 aaKnown RBP26.18■■□□□ 1.78
ATXN3-253ENST00000621269 CXCL8P10145 99 aa26.18■■□□□ 1.78
ATXN3-253ENST00000621269 ELF1P32519 619 aa26.18■■□□□ 1.78
ATXN3-253ENST00000621269 MCM4P33991 863 aa26.18■■□□□ 1.78
ATXN3-253ENST00000621269 ARPP19P56211 112 aa26.18■■□□□ 1.78
ATXN3-253ENST00000621269 HTR4Q13639 388 aa26.18■■□□□ 1.78
ATXN3-253ENST00000621269 KYAT1Q16773 422 aa26.18■■□□□ 1.78
ATXN3-253ENST00000621269 SLC8B1Q6J4K2 584 aa26.18■■□□□ 1.78
ATXN3-253ENST00000621269 ZNF461Q8TAF7 563 aa26.18■■□□□ 1.78
ATXN3-253ENST00000621269 KCNN1Q92952 543 aa26.18■■□□□ 1.78
ATXN3-253ENST00000621269 HAPLN2Q9GZV7 340 aa26.18■■□□□ 1.78
ATXN3-253ENST00000621269 FAM86C1Q9NVL1 165 aa26.18■■□□□ 1.78
ATXN3-253ENST00000621269 NUMBLQ9Y6R0 609 aa26.18■■□□□ 1.78
ATXN3-253ENST00000621269 TRAK2O60296 914 aa26.17■■□□□ 1.78
ATXN3-253ENST00000621269 NPR3P17342 541 aa26.17■■□□□ 1.78
ATXN3-253ENST00000621269 RFX1P22670 979 aa26.17■■□□□ 1.78
ATXN3-253ENST00000621269 ZNF131P52739 623 aa26.17■■□□□ 1.78
ATXN3-253ENST00000621269 ROR1Q01973 937 aa26.17■■□□□ 1.78
ATXN3-253ENST00000621269 CWF19L1Q69YN2 538 aaKnown RBP26.17■■□□□ 1.78
ATXN3-253ENST00000621269 APPL2Q8NEU8 664 aa26.17■■□□□ 1.78
ATXN3-253ENST00000621269 LRRC15Q8TF66 581 aa26.17■■□□□ 1.78
ATXN3-253ENST00000621269 LARP4BQ92615 738 aaKnown RBP26.17■■□□□ 1.78
ATXN3-253ENST00000621269 SUSD3Q96L08 255 aa26.17■■□□□ 1.78
ATXN3-253ENST00000621269 TUBGCP4Q9UGJ1 667 aa26.17■■□□□ 1.78
ATXN3-253ENST00000621269 GTF3C5Q9Y5Q8 519 aaPredicted RBP26.17■■□□□ 1.78
ATXN3-253ENST00000621269 CLIC4Q9Y696 253 aa26.17■■□□□ 1.78
ATXN3-253ENST00000621269 PRRG1O14668 218 aa26.16■■□□□ 1.78
ATXN3-253ENST00000621269 AOC1P19801 751 aa26.16■■□□□ 1.78
ATXN3-253ENST00000621269 ABCD1P33897 745 aa26.16■■□□□ 1.78
ATXN3-253ENST00000621269 DDIT3P35638 169 aa26.16■■□□□ 1.78
ATXN3-253ENST00000621269 PPP2R3AQ06190 1150 aa26.16■■□□□ 1.78
ATXN3-253ENST00000621269 SPAG1Q07617 926 aa26.16■■□□□ 1.78
ATXN3-253ENST00000621269 CTXN3Q4LDR2 81 aa26.16■■□□□ 1.78
ATXN3-253ENST00000621269 PABPC1LQ4VXU2 614 aaKnown RBP26.16■■□□□ 1.78
ATXN3-253ENST00000621269 ST13P5Q8NFI4 369 aaPredicted RBP26.16■■□□□ 1.78
ATXN3-253ENST00000621269 FGF13Q92913 245 aa26.16■■□□□ 1.78
ATXN3-253ENST00000621269 KIF12Q96FN5 646 aa26.16■■□□□ 1.78
ATXN3-253ENST00000621269 RTP3Q9BQQ7 232 aa26.16■■□□□ 1.78
ATXN3-253ENST00000621269 CCSER1Q9C0I3 900 aa26.16■■□□□ 1.78
ATXN3-253ENST00000621269 HCFC1R1Q9NWW0 138 aa26.16■■□□□ 1.78
ATXN3-253ENST00000621269 DNMT3BQ9UBC3 853 aaKnown RBP26.16■■□□□ 1.78
ATXN3-253ENST00000621269 CA14Q9ULX7 337 aa26.16■■□□□ 1.78
ATXN3-253ENST00000621269 TRIP11Q15643 1979 aa26.15■■□□□ 1.78
ATXN3-253ENST00000621269 TTC26A0AVF1 554 aa26.15■■□□□ 1.78
ATXN3-253ENST00000621269 ABLIM3O94929 683 aa26.15■■□□□ 1.78
ATXN3-253ENST00000621269 LRG1P02750 347 aa26.15■■□□□ 1.78
ATXN3-253ENST00000621269 MARCKSP29966 332 aaPredicted RBP26.15■■□□□ 1.78
ATXN3-253ENST00000621269 TNFSF9P41273 254 aa26.15■■□□□ 1.78
ATXN3-253ENST00000621269 ITFG1Q8TB96 612 aa26.15■■□□□ 1.78
ATXN3-253ENST00000621269 CCDC39Q9UFE4 941 aa26.15■■□□□ 1.78
ATXN3-253ENST00000621269 FBXL5Q9UKA1 691 aa26.15■■□□□ 1.78
ATXN3-253ENST00000621269 KCNH3Q9ULD8 1083 aa26.15■■□□□ 1.78
ATXN3-253ENST00000621269 MYH11P35749 1972 aa26.15■■□□□ 1.78
ATXN3-253ENST00000621269 WDR27A2RRH5 827 aa26.14■■□□□ 1.78
ATXN3-253ENST00000621269 OGTO15294 1046 aa26.14■■□□□ 1.78
ATXN3-253ENST00000621269 XPOTO43592 962 aaKnown RBP26.14■■□□□ 1.78
ATXN3-253ENST00000621269 PI15O43692 258 aa26.14■■□□□ 1.78
ATXN3-253ENST00000621269 TBC1D4O60343 1298 aa26.14■■□□□ 1.78
ATXN3-253ENST00000621269 PIGRP01833 764 aa26.14■■□□□ 1.78
ATXN3-253ENST00000621269 ATF2P15336 505 aa26.14■■□□□ 1.78
ATXN3-253ENST00000621269 MRPL58Q14197 206 aaKnown RBP26.14■■□□□ 1.78
ATXN3-253ENST00000621269 ZNF280DQ6N043 979 aa26.14■■□□□ 1.78
ATXN3-253ENST00000621269 PARM1Q6UWI2 310 aa26.14■■□□□ 1.78
ATXN3-253ENST00000621269 MTSS1LQ765P7 747 aa26.14■■□□□ 1.78
ATXN3-253ENST00000621269 KRI1Q8N9T8 703 aaKnown RBP26.14■■□□□ 1.78
ATXN3-253ENST00000621269 GPR152Q8TDT2 470 aa26.14■■□□□ 1.78
ATXN3-253ENST00000621269 DDX12PQ92771 950 aa26.14■■□□□ 1.78
ATXN3-253ENST00000621269 EPSTI1Q96J88 318 aa26.14■■□□□ 1.78
ATXN3-253ENST00000621269 MSTO1Q9BUK6 570 aa26.14■■□□□ 1.78
ATXN3-253ENST00000621269 RPF1Q9H9Y2 349 aaKnown RBP26.14■■□□□ 1.78
ATXN3-253ENST00000621269 UBQLN1Q9UMX0 589 aaKnown RBP26.14■■□□□ 1.78
ATXN3-253ENST00000621269 PCDHB8Q9UN66 801 aa26.14■■□□□ 1.78
ATXN3-253ENST00000621269 ZDBF2Q9HCK1 2354 aa26.13■■□□□ 1.77
ATXN3-253ENST00000621269 KRBA1A5PL33 1030 aa26.13■■□□□ 1.77
ATXN3-253ENST00000621269 LACTBL1A8MY62 500 aa26.13■■□□□ 1.77
ATXN3-253ENST00000621269 CYP3A5P20815 502 aa26.13■■□□□ 1.77
ATXN3-253ENST00000621269 SYT1P21579 422 aa26.13■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms