RNA–Protein interactions for RNA: ENST00000619157.4

CBWD1-228, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 1,227 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-228ENST00000619157 NR2E3Q9Y5X4 410 aa8.6□□□□□ -1.03
CBWD1-228ENST00000619157 SLC12A7Q9Y666 1083 aa8.6□□□□□ -1.03
CBWD1-228ENST00000619157 CDH23Q9H251 3354 aa8.6□□□□□ -1.03
CBWD1-228ENST00000619157 FRMPD4Q14CM0 1322 aa8.59□□□□□ -1.03
CBWD1-228ENST00000619157 LOC102724159A0A0B4J2E5 919 aa8.59□□□□□ -1.03
CBWD1-228ENST00000619157 TRIM43BA6NCK2 446 aa8.59□□□□□ -1.03
CBWD1-228ENST00000619157 MEIS2O14770 477 aa8.59□□□□□ -1.03
CBWD1-228ENST00000619157 FFAR3O14843 346 aa8.59□□□□□ -1.03
CBWD1-228ENST00000619157 TLR3O15455 904 aaKnown RBP8.59□□□□□ -1.03
CBWD1-228ENST00000619157 RPS6KB1P23443 525 aa8.59□□□□□ -1.03
CBWD1-228ENST00000619157 SMARCA1P28370 1054 aa8.59□□□□□ -1.03
CBWD1-228ENST00000619157 MAGEA10P43363 369 aaPredicted RBP8.59□□□□□ -1.03
CBWD1-228ENST00000619157 CDK7P50613 346 aa8.59□□□□□ -1.03
CBWD1-228ENST00000619157 TLE2Q04725 743 aa8.59□□□□□ -1.03
CBWD1-228ENST00000619157 APOBRQ0VD83 1088 aa8.59□□□□□ -1.03
CBWD1-228ENST00000619157 PWP2Q15269 919 aaKnown RBP8.59□□□□□ -1.03
CBWD1-228ENST00000619157 DUSP28Q4G0W2 176 aa8.59□□□□□ -1.03
CBWD1-228ENST00000619157 IQSEC1Q6DN90 963 aa8.59□□□□□ -1.03
CBWD1-228ENST00000619157 USP17L6PQ6QN14 398 aa8.59□□□□□ -1.03
CBWD1-228ENST00000619157 CXCL17Q6UXB2 119 aa8.59□□□□□ -1.03
CBWD1-228ENST00000619157 Q6ZUG5 572 aa8.59□□□□□ -1.03
CBWD1-228ENST00000619157 REC114Q7Z4M0 266 aa8.59□□□□□ -1.03
CBWD1-228ENST00000619157 TLK2Q86UE8 772 aa8.59□□□□□ -1.03
CBWD1-228ENST00000619157 TMTC2Q8N394 836 aa8.59□□□□□ -1.03
CBWD1-228ENST00000619157 NUP43Q8NFH3 380 aa8.59□□□□□ -1.03
CBWD1-228ENST00000619157 CTCFLQ8NI51 663 aaPredicted RBP8.59□□□□□ -1.03
CBWD1-228ENST00000619157 TRIM43Q96BQ3 446 aaPredicted RBP8.59□□□□□ -1.03
CBWD1-228ENST00000619157 RMDN3Q96TC7 470 aa8.59□□□□□ -1.03
CBWD1-228ENST00000619157 PDCD2LQ9BRP1 358 aa8.59□□□□□ -1.03
CBWD1-228ENST00000619157 WDR11Q9BZH6 1224 aa8.59□□□□□ -1.03
CBWD1-228ENST00000619157 PRDM14Q9GZV8 571 aa8.59□□□□□ -1.03
CBWD1-228ENST00000619157 MAF1Q9H063 256 aa8.59□□□□□ -1.03
CBWD1-228ENST00000619157 BCAS3Q9H6U6 928 aa8.59□□□□□ -1.03
CBWD1-228ENST00000619157 PDLIM7Q9NR12 457 aa8.59□□□□□ -1.03
CBWD1-228ENST00000619157 ATP11BQ9Y2G3 1177 aa8.59□□□□□ -1.03
CBWD1-228ENST00000619157 NID2Q14112 1375 aa8.59□□□□□ -1.03
CBWD1-228ENST00000619157 LTBP2Q14767 1821 aa8.59□□□□□ -1.03
CBWD1-228ENST00000619157 MYH6P13533 1939 aa8.58□□□□□ -1.04
CBWD1-228ENST00000619157 KLF18A0A0U1RQI7 1052 aa8.58□□□□□ -1.04
CBWD1-228ENST00000619157 REC8O95072 547 aa8.58□□□□□ -1.04
CBWD1-228ENST00000619157 KIF5BP33176 963 aa8.58□□□□□ -1.04
CBWD1-228ENST00000619157 FXR1P51114 621 aaKnown RBP eCLIP8.58□□□□□ -1.04
CBWD1-228ENST00000619157 MRPS9P82933 396 aaKnown RBP8.58□□□□□ -1.04
CBWD1-228ENST00000619157 CYP4F8P98187 520 aa8.58□□□□□ -1.04
CBWD1-228ENST00000619157 TOB2Q14106 344 aaPredicted RBP8.58□□□□□ -1.04
CBWD1-228ENST00000619157 KRT32Q14532 448 aa8.58□□□□□ -1.04
CBWD1-228ENST00000619157 PGM5Q15124 567 aa8.58□□□□□ -1.04
CBWD1-228ENST00000619157 WWC2Q6AWC2 1192 aa8.58□□□□□ -1.04
CBWD1-228ENST00000619157 RPTNQ6XPR3 784 aa8.58□□□□□ -1.04
CBWD1-228ENST00000619157 MCF2L2Q86YR7 1114 aa8.58□□□□□ -1.04
CBWD1-228ENST00000619157 ADGRG2Q8IZP9 1017 aa8.58□□□□□ -1.04
CBWD1-228ENST00000619157 FBXL16Q8N461 479 aa8.58□□□□□ -1.04
CBWD1-228ENST00000619157 SLC43A3Q8NBI5 491 aa8.58□□□□□ -1.04
CBWD1-228ENST00000619157 GOLM1Q8NBJ4 401 aa8.58□□□□□ -1.04
CBWD1-228ENST00000619157 NSUN6Q8TEA1 469 aaKnown RBP8.58□□□□□ -1.04
CBWD1-228ENST00000619157 BRF1Q92994 677 aa8.58□□□□□ -1.04
CBWD1-228ENST00000619157 CDADC1Q9BWV3 514 aa8.58□□□□□ -1.04
CBWD1-228ENST00000619157 TNFRSF12AQ9NP84 129 aa8.58□□□□□ -1.04
CBWD1-228ENST00000619157 ERVK13-1Q9NX77 482 aa8.58□□□□□ -1.04
CBWD1-228ENST00000619157 TELO2Q9Y4R8 837 aa8.58□□□□□ -1.04
CBWD1-228ENST00000619157 GOLGA8AA7E2F4 631 aa8.57□□□□□ -1.04
CBWD1-228ENST00000619157 GOLGA8BA8MQT2 603 aa8.57□□□□□ -1.04
CBWD1-228ENST00000619157 GCOM1H8Y6P7 765 aaPredicted RBP8.57□□□□□ -1.04
CBWD1-228ENST00000619157 ZBTB43O43298 467 aa8.57□□□□□ -1.04
CBWD1-228ENST00000619157 EPB41L2O43491 1005 aaKnown RBP8.57□□□□□ -1.04
CBWD1-228ENST00000619157 SIGLEC6O43699 453 aa8.57□□□□□ -1.04
CBWD1-228ENST00000619157 POLR2MP0CAP2 368 aa8.57□□□□□ -1.04
CBWD1-228ENST00000619157 CALM1P0DP23 149 aa8.57□□□□□ -1.04
CBWD1-228ENST00000619157 CALM2P0DP24 149 aa8.57□□□□□ -1.04
CBWD1-228ENST00000619157 CALM3P0DP25 149 aa8.57□□□□□ -1.04
CBWD1-228ENST00000619157 CASTP20810 708 aaKnown RBP8.57□□□□□ -1.04
CBWD1-228ENST00000619157 EVCP57679 992 aa8.57□□□□□ -1.04
CBWD1-228ENST00000619157 PSMC6P62333 389 aa8.57□□□□□ -1.04
CBWD1-228ENST00000619157 SP2Q02086 613 aa8.57□□□□□ -1.04
CBWD1-228ENST00000619157 ARHGAP1Q07960 439 aa8.57□□□□□ -1.04
CBWD1-228ENST00000619157 LAPTM5Q13571 262 aa8.57□□□□□ -1.04
CBWD1-228ENST00000619157 NTRK3Q16288 839 aa8.57□□□□□ -1.04
CBWD1-228ENST00000619157 FSCN1Q16658 493 aaKnown RBP8.57□□□□□ -1.04
CBWD1-228ENST00000619157 UBE2SQ16763 222 aa8.57□□□□□ -1.04
CBWD1-228ENST00000619157 LY6KQ17RY6 165 aa8.57□□□□□ -1.04
CBWD1-228ENST00000619157 ARHGEF16Q5VV41 709 aa8.57□□□□□ -1.04
CBWD1-228ENST00000619157 BLOC1S2Q6QNY1 142 aa8.57□□□□□ -1.04
CBWD1-228ENST00000619157 SEPT14Q6ZU15 432 aa8.57□□□□□ -1.04
CBWD1-228ENST00000619157 ANKRD33Q7Z3H0 272 aa8.57□□□□□ -1.04
CBWD1-228ENST00000619157 SLCO6A1Q86UG4 719 aa8.57□□□□□ -1.04
CBWD1-228ENST00000619157 RRP36Q96EU6 259 aaKnown RBP8.57□□□□□ -1.04
CBWD1-228ENST00000619157 TMEM74Q96NL1 305 aa8.57□□□□□ -1.04
CBWD1-228ENST00000619157 IWS1Q96ST2 819 aa8.57□□□□□ -1.04
CBWD1-228ENST00000619157 LZTS2Q9BRK4 669 aa8.57□□□□□ -1.04
CBWD1-228ENST00000619157 UPF3BQ9BZI7 483 aaKnown RBP8.57□□□□□ -1.04
CBWD1-228ENST00000619157 STARD7Q9NQZ5 370 aa8.57□□□□□ -1.04
CBWD1-228ENST00000619157 Q9Y3F1 56 aa8.57□□□□□ -1.04
CBWD1-228ENST00000619157 ELP1O95163 1332 aa8.56□□□□□ -1.04
CBWD1-228ENST00000619157 ARVCFO00192 962 aa8.56□□□□□ -1.04
CBWD1-228ENST00000619157 PQBP1O60828 265 aaKnown RBP8.56□□□□□ -1.04
CBWD1-228ENST00000619157 DTNBO60941 627 aa8.56□□□□□ -1.04
CBWD1-228ENST00000619157 HMGB1P09429 215 aaKnown RBP8.56□□□□□ -1.04
CBWD1-228ENST00000619157 TXNP10599 105 aaKnown RBP8.56□□□□□ -1.04
CBWD1-228ENST00000619157 BMP8BP34820 402 aa8.56□□□□□ -1.04
CBWD1-228ENST00000619157 KCNC1P48547 511 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms