RNA–Protein interactions for RNA: ENST00000619146.1

SYN3-213, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-213ENST00000619146 SFXN1Q9H9B4 322 aa10.09□□□□□ -0.79
SYN3-213ENST00000619146 TBC1D13Q9NVG8 400 aa10.09□□□□□ -0.79
SYN3-213ENST00000619146 USTQ9Y2C2 406 aa10.09□□□□□ -0.79
SYN3-213ENST00000619146 PHLPP2Q6ZVD8 1323 aa10.08□□□□□ -0.8
SYN3-213ENST00000619146 A0A0U1RQF3 1178 aa10.08□□□□□ -0.8
SYN3-213ENST00000619146 SFI1A8K8P3 1242 aa10.08□□□□□ -0.8
SYN3-213ENST00000619146 EIF3DO15371 548 aaKnown RBP eCLIP10.08□□□□□ -0.8
SYN3-213ENST00000619146 ASAP2O43150 1006 aa10.08□□□□□ -0.8
SYN3-213ENST00000619146 RFPL2O75678 378 aa10.08□□□□□ -0.8
SYN3-213ENST00000619146 GALTP07902 379 aa10.08□□□□□ -0.8
SYN3-213ENST00000619146 SP9P0CG40 484 aa10.08□□□□□ -0.8
SYN3-213ENST00000619146 DARSP14868 501 aaKnown RBP10.08□□□□□ -0.8
SYN3-213ENST00000619146 ARL2P36404 184 aa10.08□□□□□ -0.8
SYN3-213ENST00000619146 CLCN4P51793 760 aa10.08□□□□□ -0.8
SYN3-213ENST00000619146 AFF1P51825 1210 aaKnown RBP10.08□□□□□ -0.8
SYN3-213ENST00000619146 CDC42EP1Q00587 391 aa10.08□□□□□ -0.8
SYN3-213ENST00000619146 CACNB1Q02641 598 aaPredicted RBP10.08□□□□□ -0.8
SYN3-213ENST00000619146 STK4Q13043 487 aa10.08□□□□□ -0.8
SYN3-213ENST00000619146 FOXR2Q6PJQ5 311 aa10.08□□□□□ -0.8
SYN3-213ENST00000619146 ZNF720Q7Z2F6 126 aa10.08□□□□□ -0.8
SYN3-213ENST00000619146 DDX53Q86TM3 631 aaKnown RBP10.08□□□□□ -0.8
SYN3-213ENST00000619146 ZNF280BQ86YH2 543 aa10.08□□□□□ -0.8
SYN3-213ENST00000619146 FAM200AQ8TCP9 573 aa10.08□□□□□ -0.8
SYN3-213ENST00000619146 TMEM143Q96AN5 459 aa10.08□□□□□ -0.8
SYN3-213ENST00000619146 MRPL9Q9BYD2 267 aaKnown RBP10.08□□□□□ -0.8
SYN3-213ENST00000619146 DNAJC25Q9H1X3 360 aa10.08□□□□□ -0.8
SYN3-213ENST00000619146 ST6GALNAC4Q9H4F1 302 aa10.08□□□□□ -0.8
SYN3-213ENST00000619146 SLC39A2Q9NP94 309 aa10.08□□□□□ -0.8
SYN3-213ENST00000619146 GPRC5CQ9NQ84 441 aa10.08□□□□□ -0.8
SYN3-213ENST00000619146 XPNPEP1Q9NQW7 623 aa10.08□□□□□ -0.8
SYN3-213ENST00000619146 MAN1C1Q9NR34 630 aa10.08□□□□□ -0.8
SYN3-213ENST00000619146 SUCLA2Q9P2R7 463 aaPredicted RBP10.08□□□□□ -0.8
SYN3-213ENST00000619146 GDAQ9Y2T3 454 aa10.08□□□□□ -0.8
SYN3-213ENST00000619146 PCDHB13Q9Y5F0 798 aa10.08□□□□□ -0.8
SYN3-213ENST00000619146 BAHCC1Q9P281 2608 aa10.08□□□□□ -0.8
SYN3-213ENST00000619146 UBE4BO95155 1302 aa10.07□□□□□ -0.8
SYN3-213ENST00000619146 ZNF638Q14966 1978 aaKnown RBP10.07□□□□□ -0.8
SYN3-213ENST00000619146 A0A087WZ62 844 aa10.07□□□□□ -0.8
SYN3-213ENST00000619146 CCDC195A0A1B0GUA6 201 aa10.07□□□□□ -0.8
SYN3-213ENST00000619146 BICDL2A1A5D9 508 aa10.07□□□□□ -0.8
SYN3-213ENST00000619146 CCDC169A6NNP5 214 aa10.07□□□□□ -0.8
SYN3-213ENST00000619146 SMTNL1A8MU46 457 aa10.07□□□□□ -0.8
SYN3-213ENST00000619146 BECN2A8MW95 431 aa10.07□□□□□ -0.8
SYN3-213ENST00000619146 PPP1R3GB7ZBB8 358 aa10.07□□□□□ -0.8
SYN3-213ENST00000619146 DDHD2O94830 711 aa10.07□□□□□ -0.8
SYN3-213ENST00000619146 GCNT3O95395 438 aa10.07□□□□□ -0.8
SYN3-213ENST00000619146 PRCPP42785 496 aa10.07□□□□□ -0.8
SYN3-213ENST00000619146 NAMPTP43490 491 aa10.07□□□□□ -0.8
SYN3-213ENST00000619146 PHKA2P46019 1235 aa10.07□□□□□ -0.8
SYN3-213ENST00000619146 NPTX2P47972 431 aa10.07□□□□□ -0.8
SYN3-213ENST00000619146 PEX3P56589 373 aa10.07□□□□□ -0.8
SYN3-213ENST00000619146 TPM4P67936 248 aa10.07□□□□□ -0.8
SYN3-213ENST00000619146 PAK1Q13153 545 aa10.07□□□□□ -0.8
SYN3-213ENST00000619146 TFDP1Q14186 410 aa10.07□□□□□ -0.8
SYN3-213ENST00000619146 PUM1Q14671 1186 aaKnown RBP eCLIP10.07□□□□□ -0.8
SYN3-213ENST00000619146 GSE1Q14687 1217 aa10.07□□□□□ -0.8
SYN3-213ENST00000619146 BMT2Q1RMZ1 405 aa10.07□□□□□ -0.8
SYN3-213ENST00000619146 NOMO2Q5JPE7 1267 aa10.07□□□□□ -0.8
SYN3-213ENST00000619146 GET4Q7L5D6 327 aaPredicted RBP10.07□□□□□ -0.8
SYN3-213ENST00000619146 TAS1R1Q7RTX1 841 aa10.07□□□□□ -0.8
SYN3-213ENST00000619146 KSR1Q8IVT5 923 aa10.07□□□□□ -0.8
SYN3-213ENST00000619146 SMYD4Q8IYR2 804 aaPredicted RBP10.07□□□□□ -0.8
SYN3-213ENST00000619146 SLC44A3Q8N4M1 653 aa10.07□□□□□ -0.8
SYN3-213ENST00000619146 KIAA0895Q8NCT3 520 aa10.07□□□□□ -0.8
SYN3-213ENST00000619146 DEPTORQ8TB45 409 aa10.07□□□□□ -0.8
SYN3-213ENST00000619146 ENOX1Q8TC92 643 aaKnown RBP10.07□□□□□ -0.8
SYN3-213ENST00000619146 PRPF31Q8WWY3 499 aaKnown RBP10.07□□□□□ -0.8
SYN3-213ENST00000619146 KCNN1Q92952 543 aa10.07□□□□□ -0.8
SYN3-213ENST00000619146 HVCN1Q96D96 273 aa10.07□□□□□ -0.8
SYN3-213ENST00000619146 FDXACB1Q9BRP7 624 aaPredicted RBP10.07□□□□□ -0.8
SYN3-213ENST00000619146 KMT5AQ9NQR1 393 aa10.07□□□□□ -0.8
SYN3-213ENST00000619146 TBC1D7Q9P0N9 293 aa10.07□□□□□ -0.8
SYN3-213ENST00000619146 RWDD2AQ9UIY3 292 aa10.07□□□□□ -0.8
SYN3-213ENST00000619146 PIN4Q9Y237 131 aaKnown RBP10.07□□□□□ -0.8
SYN3-213ENST00000619146 PRG3Q9Y2Y8 225 aaPredicted RBP10.07□□□□□ -0.8
SYN3-213ENST00000619146 GOLGA6L3A6NEY3 463 aa10.06□□□□□ -0.8
SYN3-213ENST00000619146 F8W810 466 aa10.06□□□□□ -0.8
SYN3-213ENST00000619146 GOLGA6L19H0YKK7 550 aa10.06□□□□□ -0.8
SYN3-213ENST00000619146 K7ENM7 598 aa10.06□□□□□ -0.8
SYN3-213ENST00000619146 IKBKBO14920 756 aa10.06□□□□□ -0.8
SYN3-213ENST00000619146 INPPL1O15357 1258 aa10.06□□□□□ -0.8
SYN3-213ENST00000619146 FGFR1OPO95684 399 aaKnown RBP10.06□□□□□ -0.8
SYN3-213ENST00000619146 POMCP01189 267 aa10.06□□□□□ -0.8
SYN3-213ENST00000619146 GLULP15104 373 aa10.06□□□□□ -0.8
SYN3-213ENST00000619146 GLRA2P23416 452 aa10.06□□□□□ -0.8
SYN3-213ENST00000619146 EFNA5P52803 228 aa10.06□□□□□ -0.8
SYN3-213ENST00000619146 SNRPFP62306 86 aaKnown RBP10.06□□□□□ -0.8
SYN3-213ENST00000619146 MYL5Q02045 173 aa10.06□□□□□ -0.8
SYN3-213ENST00000619146 LRRC63Q05C16 580 aa10.06□□□□□ -0.8
SYN3-213ENST00000619146 POU5F1BQ06416 359 aa10.06□□□□□ -0.8
SYN3-213ENST00000619146 LAMTOR4Q0VGL1 99 aa10.06□□□□□ -0.8
SYN3-213ENST00000619146 KNOP1Q1ED39 458 aaKnown RBP10.06□□□□□ -0.8
SYN3-213ENST00000619146 L1TD1Q5T7N2 865 aaKnown RBP10.06□□□□□ -0.8
SYN3-213ENST00000619146 KLHL10Q6JEL2 608 aa10.06□□□□□ -0.8
SYN3-213ENST00000619146 GLB1LQ6UWU2 654 aa10.06□□□□□ -0.8
SYN3-213ENST00000619146 C11orf57Q6ZUT1 292 aaPredicted RBP10.06□□□□□ -0.8
SYN3-213ENST00000619146 EPM2AIP1Q7L775 607 aaPredicted RBP10.06□□□□□ -0.8
SYN3-213ENST00000619146 GAS2L3Q86XJ1 694 aa10.06□□□□□ -0.8
SYN3-213ENST00000619146 PALB2Q86YC2 1186 aa10.06□□□□□ -0.8
SYN3-213ENST00000619146 LINC01465Q8N7H1 131 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms