RNA–Protein interactions for RNA: ENST00000618562.1

VEGFC-202, Transcript of vascular endothelial growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VEGFC, Length 2,064 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-202ENST00000618562 IFT122Q9HBG6 1241 aa27.21■■□□□ 1.95
VEGFC-202ENST00000618562 MGAMO43451 1857 aa27.21■■□□□ 1.95
VEGFC-202ENST00000618562 CNTNAP2Q9UHC6 1331 aa27.21■■□□□ 1.95
VEGFC-202ENST00000618562 A6NJR5 290 aa27.21■■□□□ 1.95
VEGFC-202ENST00000618562 CCDC188H7C350 402 aa27.21■■□□□ 1.95
VEGFC-202ENST00000618562 INO80B-WBP1J3KQ70 363 aa27.21■■□□□ 1.95
VEGFC-202ENST00000618562 ACKR2O00590 384 aa27.21■■□□□ 1.95
VEGFC-202ENST00000618562 TM4SF4P48230 202 aa27.21■■□□□ 1.95
VEGFC-202ENST00000618562 RNASE9P60153 205 aaKnown RBP27.21■■□□□ 1.95
VEGFC-202ENST00000618562 ZBTB33Q86T24 672 aa27.21■■□□□ 1.95
VEGFC-202ENST00000618562 PPM1KQ8N3J5 372 aa27.21■■□□□ 1.95
VEGFC-202ENST00000618562 HELQQ8TDG4 1101 aa27.21■■□□□ 1.95
VEGFC-202ENST00000618562 CASKIN2Q8WXE0 1202 aa27.21■■□□□ 1.95
VEGFC-202ENST00000618562 CTNNBL1Q8WYA6 563 aaPredicted RBP27.21■■□□□ 1.95
VEGFC-202ENST00000618562 APBA2Q99767 749 aa27.21■■□□□ 1.95
VEGFC-202ENST00000618562 NFKBIZQ9BYH8 718 aa27.21■■□□□ 1.95
VEGFC-202ENST00000618562 INO80BQ9C086 356 aaPredicted RBP27.21■■□□□ 1.95
VEGFC-202ENST00000618562 ZSCAN5CA6NGD5 496 aaPredicted RBP27.2■■□□□ 1.95
VEGFC-202ENST00000618562 TMCO5BA8MYB1 307 aa27.2■■□□□ 1.95
VEGFC-202ENST00000618562 TNPO2O14787 897 aaKnown RBP27.2■■□□□ 1.95
VEGFC-202ENST00000618562 IGHA2P01877 340 aa27.2■■□□□ 1.95
VEGFC-202ENST00000618562 TNNI1P19237 187 aa27.2■■□□□ 1.95
VEGFC-202ENST00000618562 MARCH8Q5T0T0 291 aa27.2■■□□□ 1.95
VEGFC-202ENST00000618562 SOCS4Q8WXH5 440 aa27.2■■□□□ 1.95
VEGFC-202ENST00000618562 TCHPQ9BT92 498 aa27.2■■□□□ 1.95
VEGFC-202ENST00000618562 GPBP1L1Q9HC44 474 aaPredicted RBP27.2■■□□□ 1.95
VEGFC-202ENST00000618562 B4GALT5O43286 388 aa27.2■■□□□ 1.94
VEGFC-202ENST00000618562 C4BPAP04003 597 aaKnown RBP27.2■■□□□ 1.94
VEGFC-202ENST00000618562 IQCF3P0C7M6 154 aa27.2■■□□□ 1.94
VEGFC-202ENST00000618562 PROZP22891 400 aa27.2■■□□□ 1.94
VEGFC-202ENST00000618562 TNFSF9P41273 254 aa27.2■■□□□ 1.94
VEGFC-202ENST00000618562 MCL1Q07820 350 aa27.2■■□□□ 1.94
VEGFC-202ENST00000618562 GRIK4Q16099 956 aa27.2■■□□□ 1.94
VEGFC-202ENST00000618562 ZACNQ401N2 412 aa27.2■■□□□ 1.94
VEGFC-202ENST00000618562 TSHZ1Q6ZSZ6 1077 aa27.2■■□□□ 1.94
VEGFC-202ENST00000618562 IFT81Q8WYA0 676 aa27.2■■□□□ 1.94
VEGFC-202ENST00000618562 NOC2LQ9Y3T9 749 aaKnown RBP27.2■■□□□ 1.94
VEGFC-202ENST00000618562 PCNTO95613 3336 aa27.19■■□□□ 1.94
VEGFC-202ENST00000618562 ESYT3A0FGR9 886 aa27.19■■□□□ 1.94
VEGFC-202ENST00000618562 KIF3CO14782 793 aa27.19■■□□□ 1.94
VEGFC-202ENST00000618562 SHOX2O60902 331 aaPredicted RBP27.19■■□□□ 1.94
VEGFC-202ENST00000618562 POU5F1BQ06416 359 aa27.19■■□□□ 1.94
VEGFC-202ENST00000618562 TDRD10Q5VZ19 366 aaKnown RBP27.19■■□□□ 1.94
VEGFC-202ENST00000618562 TLK2Q86UE8 772 aa27.19■■□□□ 1.94
VEGFC-202ENST00000618562 KLHL7Q8IXQ5 586 aa27.19■■□□□ 1.94
VEGFC-202ENST00000618562 ELMO3Q96BJ8 720 aa27.19■■□□□ 1.94
VEGFC-202ENST00000618562 NT5C1BQ96P26 610 aa27.19■■□□□ 1.94
VEGFC-202ENST00000618562 PTPRHQ9HD43 1115 aa27.19■■□□□ 1.94
VEGFC-202ENST00000618562 AMFRQ9UKV5 643 aa27.19■■□□□ 1.94
VEGFC-202ENST00000618562 TNFAIP3P21580 790 aa27.18■■□□□ 1.94
VEGFC-202ENST00000618562 PRPF4BQ13523 1007 aaKnown RBP27.18■■□□□ 1.94
VEGFC-202ENST00000618562 CGRRF1Q99675 332 aa27.18■■□□□ 1.94
VEGFC-202ENST00000618562 PI4K2AQ9BTU6 479 aa27.18■■□□□ 1.94
VEGFC-202ENST00000618562 ISCUQ9H1K1 167 aa27.18■■□□□ 1.94
VEGFC-202ENST00000618562 AKT3Q9Y243 479 aa27.18■■□□□ 1.94
VEGFC-202ENST00000618562 VTNP04004 478 aa27.18■■□□□ 1.94
VEGFC-202ENST00000618562 MFAP3P55082 362 aa27.18■■□□□ 1.94
VEGFC-202ENST00000618562 IRX5P78411 483 aaPredicted RBP27.18■■□□□ 1.94
VEGFC-202ENST00000618562 CUL1Q13616 776 aa27.18■■□□□ 1.94
VEGFC-202ENST00000618562 ATF7IP2Q5U623 682 aa27.18■■□□□ 1.94
VEGFC-202ENST00000618562 BRSK2Q8IWQ3 736 aa27.18■■□□□ 1.94
VEGFC-202ENST00000618562 SMC1BQ8NDV3 1235 aa27.18■■□□□ 1.94
VEGFC-202ENST00000618562 SLC35G2Q8TBE7 412 aa27.18■■□□□ 1.94
VEGFC-202ENST00000618562 PPP1R16BQ96T49 567 aa27.18■■□□□ 1.94
VEGFC-202ENST00000618562 TTC7AQ9ULT0 858 aaPredicted RBP27.18■■□□□ 1.94
VEGFC-202ENST00000618562 A0A087WZ62 844 aa27.17■■□□□ 1.94
VEGFC-202ENST00000618562 BHMG1C9JSJ3 638 aaPredicted RBP27.17■■□□□ 1.94
VEGFC-202ENST00000618562 OGTO15294 1046 aa27.17■■□□□ 1.94
VEGFC-202ENST00000618562 CA12O43570 354 aa27.17■■□□□ 1.94
VEGFC-202ENST00000618562 TMOD1P28289 359 aa27.17■■□□□ 1.94
VEGFC-202ENST00000618562 PHKA2P46019 1235 aa27.17■■□□□ 1.94
VEGFC-202ENST00000618562 GRM1Q13255 1194 aa27.17■■□□□ 1.94
VEGFC-202ENST00000618562 MPZL3Q6UWV2 235 aa27.17■■□□□ 1.94
VEGFC-202ENST00000618562 IFNLR1Q8IU57 520 aaPredicted RBP27.17■■□□□ 1.94
VEGFC-202ENST00000618562 FAM71AQ8IYT1 594 aa27.17■■□□□ 1.94
VEGFC-202ENST00000618562 IQCKQ8N0W5 287 aa27.17■■□□□ 1.94
VEGFC-202ENST00000618562 SHC3Q92529 594 aa27.17■■□□□ 1.94
VEGFC-202ENST00000618562 TATDN2Q93075 761 aa27.17■■□□□ 1.94
VEGFC-202ENST00000618562 HHIPL1Q96JK4 782 aa27.17■■□□□ 1.94
VEGFC-202ENST00000618562 ZIM3Q96PE6 472 aa27.17■■□□□ 1.94
VEGFC-202ENST00000618562 FDXACB1Q9BRP7 624 aaPredicted RBP27.17■■□□□ 1.94
VEGFC-202ENST00000618562 ANKRD62A6NC57 917 aa27.17■■□□□ 1.94
VEGFC-202ENST00000618562 TMEM88BA6NKF7 163 aa27.17■■□□□ 1.94
VEGFC-202ENST00000618562 FAM153BP0C7A2 387 aa27.17■■□□□ 1.94
VEGFC-202ENST00000618562 FAM153CQ494X1 144 aa27.17■■□□□ 1.94
VEGFC-202ENST00000618562 SLITRK6Q9H5Y7 841 aa27.17■■□□□ 1.94
VEGFC-202ENST00000618562 FAM153AQ9UHL3 310 aa27.17■■□□□ 1.94
VEGFC-202ENST00000618562 BUB1BO60566 1050 aaPredicted RBP27.16■■□□□ 1.94
VEGFC-202ENST00000618562 ZC3H11AO75152 810 aaKnown RBP eCLIP27.16■■□□□ 1.94
VEGFC-202ENST00000618562 F2P00734 622 aa27.16■■□□□ 1.94
VEGFC-202ENST00000618562 CFAP58Q5T655 872 aa27.16■■□□□ 1.94
VEGFC-202ENST00000618562 EEF1DP3Q658K8 133 aa27.16■■□□□ 1.94
VEGFC-202ENST00000618562 LRRC31Q6UY01 552 aa27.16■■□□□ 1.94
VEGFC-202ENST00000618562 KAT2BQ92831 832 aa27.16■■□□□ 1.94
VEGFC-202ENST00000618562 CSDE1O75534 798 aaKnown RBP27.15■■□□□ 1.94
VEGFC-202ENST00000618562 VNN1O95497 513 aa27.15■■□□□ 1.94
VEGFC-202ENST00000618562 HLA-DRAP01903 254 aa27.15■■□□□ 1.94
VEGFC-202ENST00000618562 CDR2LQ86X02 465 aaPredicted RBP27.15■■□□□ 1.94
VEGFC-202ENST00000618562 OR5B17Q8NGF7 314 aa27.15■■□□□ 1.94
VEGFC-202ENST00000618562 AGPAT1Q99943 283 aa27.15■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms