RNA–Protein interactions for RNA: ENST00000618440.1

U6.42-201, humanhuman

BASIC

Gene U6, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U6.42-201ENST00000618440 CNNM4Q6P4Q7 775 aa4.8□□□□□ -1.64
U6.42-201ENST00000618440 SEM1Q6ZVN7 128 aa4.8□□□□□ -1.64
U6.42-201ENST00000618440 AMIGO2Q86SJ2 522 aa4.8□□□□□ -1.64
U6.42-201ENST00000618440 VGLL2Q8N8G2 317 aa4.8□□□□□ -1.64
U6.42-201ENST00000618440 PAWRQ96IZ0 340 aaKnown RBP4.8□□□□□ -1.64
U6.42-201ENST00000618440 REXO4Q9GZR2 422 aaKnown RBP4.8□□□□□ -1.64
U6.42-201ENST00000618440 LATS1O95835 1130 aa4.79□□□□□ -1.64
U6.42-201ENST00000618440 SRGNP10124 158 aa4.79□□□□□ -1.64
U6.42-201ENST00000618440 GPD1P21695 349 aa4.79□□□□□ -1.64
U6.42-201ENST00000618440 GRIA3P42263 894 aa4.79□□□□□ -1.64
U6.42-201ENST00000618440 CDK17Q00537 523 aa4.79□□□□□ -1.64
U6.42-201ENST00000618440 EZH2Q15910 746 aaKnown RBP4.79□□□□□ -1.64
U6.42-201ENST00000618440 ADRM1Q16186 407 aa4.79□□□□□ -1.64
U6.42-201ENST00000618440 TSTD2Q5T7W7 516 aa4.79□□□□□ -1.64
U6.42-201ENST00000618440 ZNF626Q68DY1 528 aa4.79□□□□□ -1.64
U6.42-201ENST00000618440 FCRLBQ6BAA4 426 aa4.79□□□□□ -1.64
U6.42-201ENST00000618440 ZNF782Q6ZMW2 699 aaPredicted RBP4.79□□□□□ -1.64
U6.42-201ENST00000618440 UBE3BQ7Z3V4 1068 aa4.79□□□□□ -1.64
U6.42-201ENST00000618440 GRASPQ7Z6J2 395 aaPredicted RBP4.79□□□□□ -1.64
U6.42-201ENST00000618440 TFAP2BQ92481 460 aa4.79□□□□□ -1.64
U6.42-201ENST00000618440 LPIN2Q92539 896 aa4.79□□□□□ -1.64
U6.42-201ENST00000618440 NINJ1Q92982 152 aa4.79□□□□□ -1.64
U6.42-201ENST00000618440 DMRT3Q9NQL9 472 aa4.79□□□□□ -1.64
U6.42-201ENST00000618440 MTO1Q9Y2Z2 717 aaKnown RBP4.79□□□□□ -1.64
U6.42-201ENST00000618440 ADM5C9JUS6 153 aa4.78□□□□□ -1.64
U6.42-201ENST00000618440 FCER1AP12319 257 aa4.78□□□□□ -1.64
U6.42-201ENST00000618440 HOXB6P17509 224 aaKnown RBP4.78□□□□□ -1.64
U6.42-201ENST00000618440 GATA3P23771 443 aa4.78□□□□□ -1.64
U6.42-201ENST00000618440 IL2P60568 153 aa4.78□□□□□ -1.64
U6.42-201ENST00000618440 CCT2P78371 535 aaKnown RBP4.78□□□□□ -1.64
U6.42-201ENST00000618440 EXOSC10Q01780 885 aaKnown RBP4.78□□□□□ -1.64
U6.42-201ENST00000618440 OCRLQ01968 901 aa4.78□□□□□ -1.64
U6.42-201ENST00000618440 SEPT2Q15019 361 aa4.78□□□□□ -1.64
U6.42-201ENST00000618440 UGT8Q16880 541 aa4.78□□□□□ -1.64
U6.42-201ENST00000618440 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.78□□□□□ -1.64
U6.42-201ENST00000618440 TSHZ1Q6ZSZ6 1077 aa4.78□□□□□ -1.64
U6.42-201ENST00000618440 COLGALT2Q8IYK4 626 aa4.78□□□□□ -1.64
U6.42-201ENST00000618440 PQLC1Q8N2U9 271 aa4.78□□□□□ -1.64
U6.42-201ENST00000618440 DNAJC2Q99543 621 aaKnown RBP4.78□□□□□ -1.64
U6.42-201ENST00000618440 NOC2LQ9Y3T9 749 aaKnown RBP4.78□□□□□ -1.64
U6.42-201ENST00000618440 ACTL7AQ9Y615 435 aa4.78□□□□□ -1.64
U6.42-201ENST00000618440 TRGV11A0A075B6L2 103 aa4.77□□□□□ -1.65
U6.42-201ENST00000618440 WDR27A2RRH5 827 aa4.77□□□□□ -1.65
U6.42-201ENST00000618440 VWC2LB2RUY7 222 aa4.77□□□□□ -1.65
U6.42-201ENST00000618440 IL2RBP14784 551 aa4.77□□□□□ -1.65
U6.42-201ENST00000618440 ENPP1P22413 925 aa4.77□□□□□ -1.65
U6.42-201ENST00000618440 ECHS1P30084 290 aa4.77□□□□□ -1.65
U6.42-201ENST00000618440 SRSF7Q16629 238 aaKnown RBP eCLIP4.77□□□□□ -1.65
U6.42-201ENST00000618440 MTX3Q5HYI7 312 aa4.77□□□□□ -1.65
U6.42-201ENST00000618440 KIAA1614Q5VZ46 1190 aa4.77□□□□□ -1.65
U6.42-201ENST00000618440 CMIPQ8IY22 773 aa4.77□□□□□ -1.65
U6.42-201ENST00000618440 SYNPOQ8N3V7 929 aa4.77□□□□□ -1.65
U6.42-201ENST00000618440 NUP133Q8WUM0 1156 aa4.77□□□□□ -1.65
U6.42-201ENST00000618440 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.77□□□□□ -1.65
U6.42-201ENST00000618440 KCNG1Q9UIX4 513 aa4.77□□□□□ -1.65
U6.42-201ENST00000618440 AJAP1Q9UKB5 411 aaPredicted RBP4.77□□□□□ -1.65
U6.42-201ENST00000618440 BTBD3Q9Y2F9 522 aa4.77□□□□□ -1.65
U6.42-201ENST00000618440 CDHR4A6H8M9 788 aa4.76□□□□□ -1.65
U6.42-201ENST00000618440 LINC01548A6NM66 108 aa4.76□□□□□ -1.65
U6.42-201ENST00000618440 LINC00473A8K010 186 aa4.76□□□□□ -1.65
U6.42-201ENST00000618440 IGKV2-30P06310 120 aa4.76□□□□□ -1.65
U6.42-201ENST00000618440 PRR35P0CG20 571 aa4.76□□□□□ -1.65
U6.42-201ENST00000618440 SLC6A4P31645 630 aa4.76□□□□□ -1.65
U6.42-201ENST00000618440 ETFDHQ16134 617 aa4.76□□□□□ -1.65
U6.42-201ENST00000618440 TXNRD1Q16881 649 aa4.76□□□□□ -1.65
U6.42-201ENST00000618440 KAZNQ674X7 775 aa4.76□□□□□ -1.65
U6.42-201ENST00000618440 FOXR2Q6PJQ5 311 aa4.76□□□□□ -1.65
U6.42-201ENST00000618440 KCNK18Q7Z418 384 aa4.76□□□□□ -1.65
U6.42-201ENST00000618440 CLRN3Q8NCR9 226 aa4.76□□□□□ -1.65
U6.42-201ENST00000618440 SLC30A5Q8TAD4 765 aa4.76□□□□□ -1.65
U6.42-201ENST00000618440 CASKIN2Q8WXE0 1202 aa4.76□□□□□ -1.65
U6.42-201ENST00000618440 PNKPQ96T60 521 aa4.76□□□□□ -1.65
U6.42-201ENST00000618440 LANCL2Q9NS86 450 aa4.76□□□□□ -1.65
U6.42-201ENST00000618440 MOCS1Q9NZB8 636 aa4.76□□□□□ -1.65
U6.42-201ENST00000618440 SERGEFQ9UGK8 458 aa4.76□□□□□ -1.65
U6.42-201ENST00000618440 A0A1W2PS29 197 aa4.75□□□□□ -1.65
U6.42-201ENST00000618440 RAB11FIP3O75154 756 aa4.75□□□□□ -1.65
U6.42-201ENST00000618440 NTN1O95631 604 aa4.75□□□□□ -1.65
U6.42-201ENST00000618440 AMY1AP04745 511 aa4.75□□□□□ -1.65
U6.42-201ENST00000618440 BPIP17213 487 aa4.75□□□□□ -1.65
U6.42-201ENST00000618440 MTM1Q13496 603 aa4.75□□□□□ -1.65
U6.42-201ENST00000618440 TCEA2Q15560 299 aa4.75□□□□□ -1.65
U6.42-201ENST00000618440 NFE2L2Q16236 605 aa4.75□□□□□ -1.65
U6.42-201ENST00000618440 GPR162Q16538 588 aa4.75□□□□□ -1.65
U6.42-201ENST00000618440 LCE1EQ5T753 118 aa4.75□□□□□ -1.65
U6.42-201ENST00000618440 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.75□□□□□ -1.65
U6.42-201ENST00000618440 DHX37Q8IY37 1157 aaKnown RBP4.75□□□□□ -1.65
U6.42-201ENST00000618440 ZGPATQ8N5A5 531 aaKnown RBP4.75□□□□□ -1.65
U6.42-201ENST00000618440 SEMA6DQ8NFY4 1073 aa4.75□□□□□ -1.65
U6.42-201ENST00000618440 OR2W6PQ8NHA6 318 aa4.75□□□□□ -1.65
U6.42-201ENST00000618440 RNPC3Q96LT9 517 aaKnown RBP4.75□□□□□ -1.65
U6.42-201ENST00000618440 FCRL4Q96PJ5 515 aa4.75□□□□□ -1.65
U6.42-201ENST00000618440 MED15Q96RN5 788 aa4.75□□□□□ -1.65
U6.42-201ENST00000618440 TLR10Q9BXR5 811 aa4.75□□□□□ -1.65
U6.42-201ENST00000618440 GSTO2Q9H4Y5 243 aa4.75□□□□□ -1.65
U6.42-201ENST00000618440 CTTNBP2NLQ9P2B4 639 aa4.75□□□□□ -1.65
U6.42-201ENST00000618440 CCDC151A5D8V7 595 aa4.74□□□□□ -1.65
U6.42-201ENST00000618440 HNRNPMP52272 730 aaKnown RBP eCLIP4.74□□□□□ -1.65
U6.42-201ENST00000618440 SOX10P56693 466 aa4.74□□□□□ -1.65
U6.42-201ENST00000618440 ATP8B2P98198 1209 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms