RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 CDC42EP4Q9H3Q1 356 aaKnown RBP7.8□□□□□ -1.16
PDE6A-205ENST00000617647 HERC5Q9UII4 1024 aaKnown RBP7.8□□□□□ -1.16
PDE6A-205ENST00000617647 GIT1Q9Y2X7 761 aa7.8□□□□□ -1.16
PDE6A-205ENST00000617647 STARD13Q9Y3M8 1113 aa7.8□□□□□ -1.16
PDE6A-205ENST00000617647 SPEF1Q9Y4P9 236 aa7.8□□□□□ -1.16
PDE6A-205ENST00000617647 MROH7Q68CQ1 1323 aa7.79□□□□□ -1.16
PDE6A-205ENST00000617647 GOLGA8RI6L899 631 aa7.79□□□□□ -1.16
PDE6A-205ENST00000617647 AMPD1P23109 780 aa7.79□□□□□ -1.16
PDE6A-205ENST00000617647 DSG3P32926 999 aa7.79□□□□□ -1.16
PDE6A-205ENST00000617647 ACADVLP49748 655 aa7.79□□□□□ -1.16
PDE6A-205ENST00000617647 TPD52P55327 224 aaPredicted RBP7.79□□□□□ -1.16
PDE6A-205ENST00000617647 FAM69CQ0P6D2 419 aa7.79□□□□□ -1.16
PDE6A-205ENST00000617647 CEP55Q53EZ4 464 aa7.79□□□□□ -1.16
PDE6A-205ENST00000617647 SGO2Q562F6 1265 aa7.79□□□□□ -1.16
PDE6A-205ENST00000617647 PERM1Q5SV97 790 aa7.79□□□□□ -1.16
PDE6A-205ENST00000617647 ZNF530Q6P9A1 599 aaPredicted RBP7.79□□□□□ -1.16
PDE6A-205ENST00000617647 NEK10Q6ZWH5 1172 aa7.79□□□□□ -1.16
PDE6A-205ENST00000617647 ZBED8Q8IZ13 594 aa7.79□□□□□ -1.16
PDE6A-205ENST00000617647 APPBP2Q92624 585 aa7.79□□□□□ -1.16
PDE6A-205ENST00000617647 UTP4Q969X6 686 aaKnown RBP7.79□□□□□ -1.16
PDE6A-205ENST00000617647 PPWD1Q96BP3 646 aaKnown RBP7.79□□□□□ -1.16
PDE6A-205ENST00000617647 FAM136AQ96C01 138 aa7.79□□□□□ -1.16
PDE6A-205ENST00000617647 C18orf8Q96DM3 657 aa7.79□□□□□ -1.16
PDE6A-205ENST00000617647 ERGIC2Q96RQ1 377 aa7.79□□□□□ -1.16
PDE6A-205ENST00000617647 ATP8A2Q9NTI2 1148 aa7.79□□□□□ -1.16
PDE6A-205ENST00000617647 MTO1Q9Y2Z2 717 aaKnown RBP7.79□□□□□ -1.16
PDE6A-205ENST00000617647 XDHP47989 1333 aa7.79□□□□□ -1.16
PDE6A-205ENST00000617647 A0A087X0B3 334 aa7.79□□□□□ -1.16
PDE6A-205ENST00000617647 CFLARO15519 480 aa7.79□□□□□ -1.16
PDE6A-205ENST00000617647 EIF2S1P05198 315 aaKnown RBP7.79□□□□□ -1.16
PDE6A-205ENST00000617647 KRT3P12035 628 aa7.79□□□□□ -1.16
PDE6A-205ENST00000617647 IFNAR1P17181 557 aa7.79□□□□□ -1.16
PDE6A-205ENST00000617647 KCNJ1P48048 391 aa7.79□□□□□ -1.16
PDE6A-205ENST00000617647 TOB1P50616 345 aaPredicted RBP7.79□□□□□ -1.16
PDE6A-205ENST00000617647 YARSP54577 528 aaKnown RBP7.79□□□□□ -1.16
PDE6A-205ENST00000617647 NR1H3Q13133 447 aa7.79□□□□□ -1.16
PDE6A-205ENST00000617647 SLC45A4Q5BKX6 768 aa7.79□□□□□ -1.16
PDE6A-205ENST00000617647 DHDDSQ86SQ9 333 aa7.79□□□□□ -1.16
PDE6A-205ENST00000617647 PRPF39Q86UA1 669 aaKnown RBP7.79□□□□□ -1.16
PDE6A-205ENST00000617647 MB21D2Q8IYB1 491 aaPredicted RBP7.79□□□□□ -1.16
PDE6A-205ENST00000617647 OSBP2Q969R2 916 aa7.79□□□□□ -1.16
PDE6A-205ENST00000617647 RNF41Q9H4P4 317 aaPredicted RBP7.79□□□□□ -1.16
PDE6A-205ENST00000617647 KANSL2Q9H9L4 492 aa7.79□□□□□ -1.16
PDE6A-205ENST00000617647 TRIM39Q9HCM9 518 aa7.79□□□□□ -1.16
PDE6A-205ENST00000617647 INIPQ9NRY2 104 aa7.79□□□□□ -1.16
PDE6A-205ENST00000617647 ARL8BQ9NVJ2 186 aa7.79□□□□□ -1.16
PDE6A-205ENST00000617647 UVRAGQ9P2Y5 699 aa7.79□□□□□ -1.16
PDE6A-205ENST00000617647 SOS2Q07890 1332 aaPredicted RBP7.79□□□□□ -1.16
PDE6A-205ENST00000617647 MYPNQ86TC9 1320 aa7.79□□□□□ -1.16
PDE6A-205ENST00000617647 CD163L1Q9NR16 1453 aa7.79□□□□□ -1.16
PDE6A-205ENST00000617647 PHF2O75151 1096 aa7.79□□□□□ -1.16
PDE6A-205ENST00000617647 CYP1A1P04798 512 aaPredicted RBP7.79□□□□□ -1.16
PDE6A-205ENST00000617647 HSPA1AP0DMV8 641 aaKnown RBP7.79□□□□□ -1.16
PDE6A-205ENST00000617647 HSPA1BP0DMV9 641 aaKnown RBP7.79□□□□□ -1.16
PDE6A-205ENST00000617647 STAT1P42224 750 aa7.79□□□□□ -1.16
PDE6A-205ENST00000617647 ATXN3P54252 364 aaPredicted RBP7.79□□□□□ -1.16
PDE6A-205ENST00000617647 MAPK7Q13164 816 aa7.79□□□□□ -1.16
PDE6A-205ENST00000617647 NCOA4Q13772 614 aa7.79□□□□□ -1.16
PDE6A-205ENST00000617647 ZNF423Q2M1K9 1284 aa7.79□□□□□ -1.16
PDE6A-205ENST00000617647 EFHC1Q5JVL4 640 aa7.79□□□□□ -1.16
PDE6A-205ENST00000617647 KIF6Q6ZMV9 814 aa7.79□□□□□ -1.16
PDE6A-205ENST00000617647 ARHGAP27Q6ZUM4 889 aa7.79□□□□□ -1.16
PDE6A-205ENST00000617647 BBOF1Q8ND07 529 aa7.79□□□□□ -1.16
PDE6A-205ENST00000617647 STARD8Q92502 1023 aa7.79□□□□□ -1.16
PDE6A-205ENST00000617647 CDHR1Q96JP9 859 aa7.79□□□□□ -1.16
PDE6A-205ENST00000617647 SNX25Q9H3E2 840 aa7.79□□□□□ -1.16
PDE6A-205ENST00000617647 WARS2Q9UGM6 360 aaKnown RBP7.79□□□□□ -1.16
PDE6A-205ENST00000617647 VPS51Q9UID3 782 aa7.79□□□□□ -1.16
PDE6A-205ENST00000617647 ARHGAP26Q9UNA1 814 aa7.79□□□□□ -1.16
PDE6A-205ENST00000617647 SMG5Q9UPR3 1016 aaKnown RBP7.79□□□□□ -1.16
PDE6A-205ENST00000617647 EDC4Q6P2E9 1401 aaKnown RBP7.79□□□□□ -1.16
PDE6A-205ENST00000617647 DLC1Q96QB1 1528 aa7.78□□□□□ -1.16
PDE6A-205ENST00000617647 SH3PXD2BA1X283 911 aa7.78□□□□□ -1.16
PDE6A-205ENST00000617647 H3BSA7 217 aa7.78□□□□□ -1.16
PDE6A-205ENST00000617647 PSMD11O00231 422 aa7.78□□□□□ -1.16
PDE6A-205ENST00000617647 PJA2O43164 708 aa7.78□□□□□ -1.16
PDE6A-205ENST00000617647 PEX1O43933 1283 aa7.78□□□□□ -1.16
PDE6A-205ENST00000617647 MFN2O95140 757 aa7.78□□□□□ -1.16
PDE6A-205ENST00000617647 LONP1P36776 959 aaKnown RBP7.78□□□□□ -1.16
PDE6A-205ENST00000617647 GSSP48637 474 aa7.78□□□□□ -1.16
PDE6A-205ENST00000617647 AQP4P55087 323 aa7.78□□□□□ -1.16
PDE6A-205ENST00000617647 LRRC63Q05C16 580 aa7.78□□□□□ -1.16
PDE6A-205ENST00000617647 TMPRSS6Q8IU80 811 aa7.78□□□□□ -1.16
PDE6A-205ENST00000617647 CTAGE3PQ8IX95 158 aa7.78□□□□□ -1.16
PDE6A-205ENST00000617647 SPATA5Q8NB90 893 aa7.78□□□□□ -1.16
PDE6A-205ENST00000617647 NRG4Q8WWG1 115 aa7.78□□□□□ -1.16
PDE6A-205ENST00000617647 GAB3Q8WWW8 586 aa7.78□□□□□ -1.16
PDE6A-205ENST00000617647 EME1Q96AY2 570 aa7.78□□□□□ -1.16
PDE6A-205ENST00000617647 SHCBP1LQ9BZQ2 653 aa7.78□□□□□ -1.16
PDE6A-205ENST00000617647 SAYSD1Q9NPB0 183 aa7.78□□□□□ -1.16
PDE6A-205ENST00000617647 MARCOQ9UEW3 520 aaPredicted RBP7.78□□□□□ -1.16
PDE6A-205ENST00000617647 FUOMA2VDF0 154 aa7.78□□□□□ -1.16
PDE6A-205ENST00000617647 E9PMD0 336 aa7.78□□□□□ -1.16
PDE6A-205ENST00000617647 RAG1P15918 1043 aa7.78□□□□□ -1.16
PDE6A-205ENST00000617647 PSMC3P17980 439 aa7.78□□□□□ -1.16
PDE6A-205ENST00000617647 TCEA1P23193 301 aaKnown RBP7.78□□□□□ -1.16
PDE6A-205ENST00000617647 MAPK10P53779 464 aa7.78□□□□□ -1.16
PDE6A-205ENST00000617647 SPIDRQ14159 915 aa7.78□□□□□ -1.16
PDE6A-205ENST00000617647 RASA2Q15283 850 aa7.78□□□□□ -1.16
PDE6A-205ENST00000617647 MAPK6Q16659 721 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms