RNA–Protein interactions for RNA: ENST00000616701.4

SEMA3B-212, Transcript of semaphorin 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-212ENST00000616701 CETPP11597 493 aa16.68■□□□□ 0.26
SEMA3B-212ENST00000616701 CARSP49589 748 aaKnown RBP16.68■□□□□ 0.26
SEMA3B-212ENST00000616701 MCCD1P59942 119 aaPredicted RBP16.68■□□□□ 0.26
SEMA3B-212ENST00000616701 EEF1DP3Q658K8 133 aa16.68■□□□□ 0.26
SEMA3B-212ENST00000616701 ZBTB8OSQ8IWT0 167 aa16.68■□□□□ 0.26
SEMA3B-212ENST00000616701 RIN2Q8WYP3 895 aaPredicted RBP16.68■□□□□ 0.26
SEMA3B-212ENST00000616701 KRT35Q92764 455 aa16.68■□□□□ 0.26
SEMA3B-212ENST00000616701 EXOC4Q96A65 974 aa16.68■□□□□ 0.26
SEMA3B-212ENST00000616701 ACO2Q99798 780 aaKnown RBP16.68■□□□□ 0.26
SEMA3B-212ENST00000616701 NUP85Q9BW27 656 aa16.68■□□□□ 0.26
SEMA3B-212ENST00000616701 MTMR12Q9C0I1 747 aa16.68■□□□□ 0.26
SEMA3B-212ENST00000616701 NR2E1Q9Y466 385 aa16.68■□□□□ 0.26
SEMA3B-212ENST00000616701 NUB1Q9Y5A7 615 aa16.68■□□□□ 0.26
SEMA3B-212ENST00000616701 IVNS1ABPQ9Y6Y0 642 aa16.68■□□□□ 0.26
SEMA3B-212ENST00000616701 PGRMC1O00264 195 aaKnown RBP16.67■□□□□ 0.26
SEMA3B-212ENST00000616701 KRIT1O00522 736 aa16.67■□□□□ 0.26
SEMA3B-212ENST00000616701 DDX3YO15523 660 aaKnown RBP16.67■□□□□ 0.26
SEMA3B-212ENST00000616701 CELF2O95319 508 aaKnown RBP16.67■□□□□ 0.26
SEMA3B-212ENST00000616701 INSRRP14616 1297 aa16.67■□□□□ 0.26
SEMA3B-212ENST00000616701 MCM3P25205 808 aa16.67■□□□□ 0.26
SEMA3B-212ENST00000616701 ZNF792Q3KQV3 632 aa16.67■□□□□ 0.26
SEMA3B-212ENST00000616701 TMEM270Q6UE05 265 aa16.67■□□□□ 0.26
SEMA3B-212ENST00000616701 GIMAP7Q8NHV1 300 aa16.67■□□□□ 0.26
SEMA3B-212ENST00000616701 ALG3Q92685 438 aa16.67■□□□□ 0.26
SEMA3B-212ENST00000616701 CGRRF1Q99675 332 aa16.67■□□□□ 0.26
SEMA3B-212ENST00000616701 CCDC113Q9H0I3 377 aa16.67■□□□□ 0.26
SEMA3B-212ENST00000616701 RRAGCQ9HB90 399 aa16.67■□□□□ 0.26
SEMA3B-212ENST00000616701 PCDHB4Q9Y5E5 795 aa16.67■□□□□ 0.26
SEMA3B-212ENST00000616701 LDHAP00338 332 aaKnown RBP16.67■□□□□ 0.26
SEMA3B-212ENST00000616701 FGGP02679 453 aa16.67■□□□□ 0.26
SEMA3B-212ENST00000616701 CCNA1P78396 465 aa16.67■□□□□ 0.26
SEMA3B-212ENST00000616701 DPP9Q86TI2 863 aa16.67■□□□□ 0.26
SEMA3B-212ENST00000616701 TMEM192Q8IY95 271 aa16.67■□□□□ 0.26
SEMA3B-212ENST00000616701 TCP11Q8WWU5 503 aa16.67■□□□□ 0.26
SEMA3B-212ENST00000616701 ITFG2Q969R8 447 aa16.67■□□□□ 0.26
SEMA3B-212ENST00000616701 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.67■□□□□ 0.261e-10■■□□□ 13.2
SEMA3B-212ENST00000616701 GBA2Q9HCG7 927 aaPredicted RBP16.67■□□□□ 0.26
SEMA3B-212ENST00000616701 NFU1Q9UMS0 254 aa16.67■□□□□ 0.26
SEMA3B-212ENST00000616701 TOM1L1O75674 476 aa16.66■□□□□ 0.26
SEMA3B-212ENST00000616701 LGALS2P05162 132 aa16.66■□□□□ 0.26
SEMA3B-212ENST00000616701 IQCF3P0C7M6 154 aa16.66■□□□□ 0.26
SEMA3B-212ENST00000616701 ABCD1P33897 745 aa16.66■□□□□ 0.26
SEMA3B-212ENST00000616701 CLDN10P78369 228 aa16.66■□□□□ 0.26
SEMA3B-212ENST00000616701 GCNT1Q02742 428 aa16.66■□□□□ 0.26
SEMA3B-212ENST00000616701 SHCBP1Q8NEM2 672 aa16.66■□□□□ 0.26
SEMA3B-212ENST00000616701 PTPN18Q99952 460 aa16.66■□□□□ 0.26
SEMA3B-212ENST00000616701 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.66■□□□□ 0.26
SEMA3B-212ENST00000616701 IGKV6-21A0A0C4DH24 114 aa16.66■□□□□ 0.26
SEMA3B-212ENST00000616701 GRIN3BO60391 1043 aa16.66■□□□□ 0.26
SEMA3B-212ENST00000616701 COMTP21964 271 aa16.66■□□□□ 0.26
SEMA3B-212ENST00000616701 ACTN2P35609 894 aa16.66■□□□□ 0.26
SEMA3B-212ENST00000616701 NOP14P78316 857 aaKnown RBP16.66■□□□□ 0.26
SEMA3B-212ENST00000616701 TFAMQ00059 246 aaKnown RBP16.66■□□□□ 0.26
SEMA3B-212ENST00000616701 NCOA4Q13772 614 aa16.66■□□□□ 0.26
SEMA3B-212ENST00000616701 MXD4Q14582 209 aaPredicted RBP16.66■□□□□ 0.26
SEMA3B-212ENST00000616701 RHOT2Q8IXI1 618 aa16.66■□□□□ 0.26
SEMA3B-212ENST00000616701 MORC4Q8TE76 937 aa16.66■□□□□ 0.26
SEMA3B-212ENST00000616701 TRIM7Q9C029 511 aa16.66■□□□□ 0.26
SEMA3B-212ENST00000616701 ATP8B3O60423 1300 aa16.66■□□□□ 0.26
SEMA3B-212ENST00000616701 VTNP04004 478 aa16.65■□□□□ 0.26
SEMA3B-212ENST00000616701 CD58P19256 250 aa16.65■□□□□ 0.26
SEMA3B-212ENST00000616701 GTF2A2P52657 109 aa16.65■□□□□ 0.26
SEMA3B-212ENST00000616701 EFNA5P52803 228 aa16.65■□□□□ 0.26
SEMA3B-212ENST00000616701 CUL2Q13617 745 aa16.65■□□□□ 0.26
SEMA3B-212ENST00000616701 ZNF394Q53GI3 561 aa16.65■□□□□ 0.26
SEMA3B-212ENST00000616701 MAMDC4Q6UXC1 1216 aa16.65■□□□□ 0.26
SEMA3B-212ENST00000616701 SCARA5Q6ZMJ2 495 aa16.65■□□□□ 0.26
SEMA3B-212ENST00000616701 ZNF564Q8TBZ8 553 aaPredicted RBP16.65■□□□□ 0.26
SEMA3B-212ENST00000616701 ACTRT1Q8TDG2 376 aa16.65■□□□□ 0.26
SEMA3B-212ENST00000616701 AENQ8WTP8 325 aaKnown RBP16.65■□□□□ 0.26
SEMA3B-212ENST00000616701 CASKIN2Q8WXE0 1202 aa16.65■□□□□ 0.26
SEMA3B-212ENST00000616701 PSD3Q9NYI0 1048 aa16.65■□□□□ 0.26
SEMA3B-212ENST00000616701 ERAP1Q9NZ08 941 aa16.65■□□□□ 0.26
SEMA3B-212ENST00000616701 HPCAL4Q9UM19 191 aa16.65■□□□□ 0.26
SEMA3B-212ENST00000616701 HBP1O60381 514 aa16.65■□□□□ 0.26
SEMA3B-212ENST00000616701 FAM153BP0C7A2 387 aa16.65■□□□□ 0.26
SEMA3B-212ENST00000616701 GUCY2FP51841 1108 aa16.65■□□□□ 0.26
SEMA3B-212ENST00000616701 TNNC1P63316 161 aa16.65■□□□□ 0.26
SEMA3B-212ENST00000616701 ZNF568Q3ZCX4 644 aa16.65■□□□□ 0.26
SEMA3B-212ENST00000616701 FAM153CQ494X1 144 aa16.65■□□□□ 0.26
SEMA3B-212ENST00000616701 CDCA2Q69YH5 1023 aaPredicted RBP16.65■□□□□ 0.26
SEMA3B-212ENST00000616701 DDX42Q86XP3 938 aaKnown RBP eCLIP16.65■□□□□ 0.26
SEMA3B-212ENST00000616701 THOC1Q96FV9 657 aaKnown RBP16.65■□□□□ 0.26
SEMA3B-212ENST00000616701 CELF4Q9BZC1 486 aaKnown RBP16.65■□□□□ 0.26
SEMA3B-212ENST00000616701 CNOT8Q9UFF9 292 aaKnown RBP16.65■□□□□ 0.26
SEMA3B-212ENST00000616701 FAM153AQ9UHL3 310 aa16.65■□□□□ 0.26
SEMA3B-212ENST00000616701 DIS3Q9Y2L1 958 aaKnown RBP16.65■□□□□ 0.26
SEMA3B-212ENST00000616701 FAM189A1O60320 539 aa16.65■□□□□ 0.26
SEMA3B-212ENST00000616701 SNAI1O95863 264 aaPredicted RBP16.65■□□□□ 0.26
SEMA3B-212ENST00000616701 GZMAP12544 262 aa16.65■□□□□ 0.26
SEMA3B-212ENST00000616701 MYL6P60660 151 aa16.65■□□□□ 0.26
SEMA3B-212ENST00000616701 ZPBP2Q6X784 338 aa16.65■□□□□ 0.26
SEMA3B-212ENST00000616701 GPR142Q7Z601 462 aa16.65■□□□□ 0.26
SEMA3B-212ENST00000616701 BRSK2Q8IWQ3 736 aa16.65■□□□□ 0.26
SEMA3B-212ENST00000616701 CYFIP2Q96F07 1278 aa16.65■□□□□ 0.26
SEMA3B-212ENST00000616701 AMACRQ9UHK6 382 aa16.65■□□□□ 0.26
SEMA3B-212ENST00000616701 TMEM59LQ9UK28 342 aa16.65■□□□□ 0.26
SEMA3B-212ENST00000616701 AKT3Q9Y243 479 aa16.65■□□□□ 0.26
SEMA3B-212ENST00000616701 RPS6KL1Q9Y6S9 549 aa16.65■□□□□ 0.26
SEMA3B-212ENST00000616701 ACO1P21399 889 aaKnown RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms