RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 CDR2LQ86X02 465 aaPredicted RBP19.39■□□□□ 0.69
TRAPPC3-209ENST00000616395 OXER1Q8TDS5 423 aa19.39■□□□□ 0.69
TRAPPC3-209ENST00000616395 TRMT61BQ9BVS5 477 aaKnown RBP19.39■□□□□ 0.69
TRAPPC3-209ENST00000616395 PIAS3Q9Y6X2 628 aa19.39■□□□□ 0.69
TRAPPC3-209ENST00000616395 CEP295Q9C0D2 2601 aa19.39■□□□□ 0.69
TRAPPC3-209ENST00000616395 CYP3A7-CYP3A51PA0A087WV96 503 aa19.38■□□□□ 0.69
TRAPPC3-209ENST00000616395 M0R2N6 131 aa19.38■□□□□ 0.69
TRAPPC3-209ENST00000616395 NRG2O14511 850 aaPredicted RBP19.38■□□□□ 0.69
TRAPPC3-209ENST00000616395 NPTXRO95502 500 aa19.38■□□□□ 0.69
TRAPPC3-209ENST00000616395 CYP3A7P24462 503 aa19.38■□□□□ 0.69
TRAPPC3-209ENST00000616395 CCDC6Q16204 474 aa19.38■□□□□ 0.69
TRAPPC3-209ENST00000616395 KLHL40Q2TBA0 621 aa19.38■□□□□ 0.69
TRAPPC3-209ENST00000616395 FAM78AQ5JUQ0 283 aa19.38■□□□□ 0.69
TRAPPC3-209ENST00000616395 PDXDC1Q6P996 788 aa19.38■□□□□ 0.69
TRAPPC3-209ENST00000616395 LONP2Q86WA8 852 aa19.38■□□□□ 0.69
TRAPPC3-209ENST00000616395 FAM177A1Q8N128 213 aaPredicted RBP19.38■□□□□ 0.69
TRAPPC3-209ENST00000616395 DAGLBQ8NCG7 672 aa19.38■□□□□ 0.69
TRAPPC3-209ENST00000616395 ZFP14Q9HCL3 533 aa19.38■□□□□ 0.69
TRAPPC3-209ENST00000616395 PPME1Q9Y570 386 aa19.38■□□□□ 0.69
TRAPPC3-209ENST00000616395 COL4A2P08572 1712 aa19.37■□□□□ 0.69
TRAPPC3-209ENST00000616395 ZMYM2Q9UBW7 1377 aa19.37■□□□□ 0.69
TRAPPC3-209ENST00000616395 FAM205CA6NFA0 338 aa19.37■□□□□ 0.69
TRAPPC3-209ENST00000616395 K7ESF4 209 aa19.37■□□□□ 0.69
TRAPPC3-209ENST00000616395 B4GALT5O43286 388 aa19.37■□□□□ 0.69
TRAPPC3-209ENST00000616395 MBTD1Q05BQ5 628 aa19.37■□□□□ 0.69
TRAPPC3-209ENST00000616395 RESTQ13127 1097 aa19.37■□□□□ 0.69
TRAPPC3-209ENST00000616395 FOXD4L6Q3SYB3 417 aaPredicted RBP19.37■□□□□ 0.69
TRAPPC3-209ENST00000616395 FOXD4L3Q6VB84 417 aaPredicted RBP19.37■□□□□ 0.69
TRAPPC3-209ENST00000616395 CEP68Q76N32 757 aa19.37■□□□□ 0.69
TRAPPC3-209ENST00000616395 MAP4K3Q8IVH8 894 aa19.37■□□□□ 0.69
TRAPPC3-209ENST00000616395 SPEM1Q8N4L4 309 aa19.37■□□□□ 0.69
TRAPPC3-209ENST00000616395 C12orf50Q8NA57 414 aaPredicted RBP19.37■□□□□ 0.69
TRAPPC3-209ENST00000616395 IRF7Q92985 503 aa19.37■□□□□ 0.69
TRAPPC3-209ENST00000616395 ZNF334Q9HCZ1 680 aaPredicted RBP19.37■□□□□ 0.69
TRAPPC3-209ENST00000616395 AVENQ9NQS1 362 aaPredicted RBP19.37■□□□□ 0.69
TRAPPC3-209ENST00000616395 AXIN1O15169 862 aa19.36■□□□□ 0.69
TRAPPC3-209ENST00000616395 DKC1O60832 514 aaKnown RBP eCLIP19.36■□□□□ 0.69
TRAPPC3-209ENST00000616395 CCNE1P24864 410 aa19.36■□□□□ 0.69
TRAPPC3-209ENST00000616395 GDI1P31150 447 aa19.36■□□□□ 0.69
TRAPPC3-209ENST00000616395 STPG1Q5TH74 334 aa19.36■□□□□ 0.69
TRAPPC3-209ENST00000616395 SLC27A1Q6PCB7 646 aa19.36■□□□□ 0.69
TRAPPC3-209ENST00000616395 UNQ6494/PRO21346Q6UXR6 183 aa19.36■□□□□ 0.69
TRAPPC3-209ENST00000616395 RTL10Q7L3V2 364 aa19.36■□□□□ 0.69
TRAPPC3-209ENST00000616395 SPATA32Q96LK8 384 aa19.36■□□□□ 0.69
TRAPPC3-209ENST00000616395 TRPV5Q9NQA5 729 aa19.36■□□□□ 0.69
TRAPPC3-209ENST00000616395 MTRRQ9UBK8 725 aa19.36■□□□□ 0.69
TRAPPC3-209ENST00000616395 KCNK5O95279 499 aa19.35■□□□□ 0.69
TRAPPC3-209ENST00000616395 PTPN2P17706 415 aa19.35■□□□□ 0.69
TRAPPC3-209ENST00000616395 HOXC13P31276 330 aa19.35■□□□□ 0.69
TRAPPC3-209ENST00000616395 YWHABP31946 246 aaKnown RBP19.35■□□□□ 0.69
TRAPPC3-209ENST00000616395 UBE2HP62256 183 aa19.35■□□□□ 0.69
TRAPPC3-209ENST00000616395 DNM1Q05193 864 aaKnown RBP19.35■□□□□ 0.69
TRAPPC3-209ENST00000616395 ELAVL2Q12926 359 aaKnown RBP19.35■□□□□ 0.69
TRAPPC3-209ENST00000616395 MXD4Q14582 209 aaPredicted RBP19.35■□□□□ 0.69
TRAPPC3-209ENST00000616395 INF2Q27J81 1249 aa19.35■□□□□ 0.69
TRAPPC3-209ENST00000616395 EARS2Q5JPH6 523 aaKnown RBP19.35■□□□□ 0.69
TRAPPC3-209ENST00000616395 PRSS36Q5K4E3 855 aa19.35■□□□□ 0.69
TRAPPC3-209ENST00000616395 VITQ6UXI7 678 aa19.35■□□□□ 0.69
TRAPPC3-209ENST00000616395 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.35■□□□□ 0.69
TRAPPC3-209ENST00000616395 IFNLR1Q8IU57 520 aaPredicted RBP19.35■□□□□ 0.69
TRAPPC3-209ENST00000616395 TCEAL4Q96EI5 215 aa19.35■□□□□ 0.69
TRAPPC3-209ENST00000616395 MTRQ99707 1265 aa19.35■□□□□ 0.69
TRAPPC3-209ENST00000616395 ARRDC1-AS1Q9H2J1 176 aa19.35■□□□□ 0.69
TRAPPC3-209ENST00000616395 RBM12Q9NTZ6 932 aaKnown RBP19.35■□□□□ 0.69
TRAPPC3-209ENST00000616395 LMBRD1Q9NUN5 540 aa19.35■□□□□ 0.69
TRAPPC3-209ENST00000616395 VAV3Q9UKW4 847 aa19.35■□□□□ 0.69
TRAPPC3-209ENST00000616395 CDY1Q9Y6F8 540 aa19.35■□□□□ 0.69
TRAPPC3-209ENST00000616395 RALGAPA1Q6GYQ0 2036 aa19.35■□□□□ 0.69
TRAPPC3-209ENST00000616395 PTGESO14684 152 aa19.34■□□□□ 0.69
TRAPPC3-209ENST00000616395 ZBTB39O15060 712 aa19.34■□□□□ 0.69
TRAPPC3-209ENST00000616395 P4HBP07237 508 aaKnown RBP19.34■□□□□ 0.69
TRAPPC3-209ENST00000616395 GUCY1B3Q02153 619 aa19.34■□□□□ 0.69
TRAPPC3-209ENST00000616395 PTGDRQ13258 359 aa19.34■□□□□ 0.69
TRAPPC3-209ENST00000616395 NR5A1Q13285 461 aa19.34■□□□□ 0.69
TRAPPC3-209ENST00000616395 PPP2R5CQ13362 524 aa19.34■□□□□ 0.69
TRAPPC3-209ENST00000616395 TFDP1Q14186 410 aa19.34■□□□□ 0.69
TRAPPC3-209ENST00000616395 XKR9Q5GH70 373 aa19.34■□□□□ 0.69
TRAPPC3-209ENST00000616395 ASB16Q96NS5 453 aa19.34■□□□□ 0.69
TRAPPC3-209ENST00000616395 CORO1BQ9BR76 489 aa19.34■□□□□ 0.69
TRAPPC3-209ENST00000616395 CXCL16Q9H2A7 254 aa19.34■□□□□ 0.69
TRAPPC3-209ENST00000616395 XPNPEP1Q9NQW7 623 aa19.34■□□□□ 0.69
TRAPPC3-209ENST00000616395 DDX25Q9UHL0 483 aaKnown RBP19.34■□□□□ 0.69
TRAPPC3-209ENST00000616395 CNOT1A5YKK6 2376 aaKnown RBP19.34■□□□□ 0.69
TRAPPC3-209ENST00000616395 PAPSS2O95340 614 aaPredicted RBP19.33■□□□□ 0.69
TRAPPC3-209ENST00000616395 ZNF806P0C7X5 589 aa19.33■□□□□ 0.69
TRAPPC3-209ENST00000616395 PSMC3P17980 439 aa19.33■□□□□ 0.69
TRAPPC3-209ENST00000616395 FGFR3P22607 806 aa19.33■□□□□ 0.69
TRAPPC3-209ENST00000616395 IGFBP6P24592 240 aaPredicted RBP19.33■□□□□ 0.69
TRAPPC3-209ENST00000616395 CAPSQ13938 189 aa19.33■□□□□ 0.69
TRAPPC3-209ENST00000616395 GALNT17Q6IS24 598 aa19.33■□□□□ 0.69
TRAPPC3-209ENST00000616395 Q6ZS52 159 aa19.33■□□□□ 0.69
TRAPPC3-209ENST00000616395 OTUD6AQ7L8S5 288 aa19.33■□□□□ 0.69
TRAPPC3-209ENST00000616395 KRT25Q7Z3Z0 450 aa19.33■□□□□ 0.69
TRAPPC3-209ENST00000616395 C4orf19Q8IY42 314 aa19.33■□□□□ 0.69
TRAPPC3-209ENST00000616395 KDF1Q8NAX2 398 aaPredicted RBP19.33■□□□□ 0.69
TRAPPC3-209ENST00000616395 ASAP3Q8TDY4 903 aa19.33■□□□□ 0.69
TRAPPC3-209ENST00000616395 ZSWIM3Q96MP5 696 aa19.33■□□□□ 0.69
TRAPPC3-209ENST00000616395 LXNQ9BS40 222 aa19.33■□□□□ 0.69
TRAPPC3-209ENST00000616395 LSM14BQ9BX40 385 aaKnown RBP19.33■□□□□ 0.69
TRAPPC3-209ENST00000616395 C2orf42Q9NWW7 574 aa19.33■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms