RNA–Protein interactions for RNA: ENST00000615505.4

SURF1-205, Transcript of SURF1, cytochrome c oxidase assembly factor, humanhuman

TSL 1 (best) BASIC

Gene SURF1, Length 991 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF1-205ENST00000615505 CREMQ03060 361 aa27.54■■■□□ 2
SURF1-205ENST00000615505 PSMD2Q13200 908 aa27.54■■■□□ 2
SURF1-205ENST00000615505 ZBTB6Q15916 424 aa27.54■■■□□ 2
SURF1-205ENST00000615505 KANK3Q6NY19 840 aa27.54■■■□□ 2
SURF1-205ENST00000615505 ARMCX5Q6P1M9 558 aa27.54■■■□□ 2
SURF1-205ENST00000615505 CEP57Q86XR8 500 aa27.54■■■□□ 2
SURF1-205ENST00000615505 CCDC47Q96A33 483 aaKnown RBP27.54■■■□□ 2
SURF1-205ENST00000615505 B3GALT6Q96L58 329 aa27.54■■■□□ 2
SURF1-205ENST00000615505 ADH1AP07327 375 aa27.53■■■□□ 2
SURF1-205ENST00000615505 HOXB8P17481 243 aaPredicted RBP27.53■■■□□ 2
SURF1-205ENST00000615505 KMT5BQ4FZB7 885 aa27.53■■■□□ 2
SURF1-205ENST00000615505 ANKRD54Q6NXT1 300 aa27.53■■■□□ 2
SURF1-205ENST00000615505 PDXDC1Q6P996 788 aa27.53■■■□□ 2
SURF1-205ENST00000615505 CRELD2Q6UXH1 353 aaPredicted RBP27.53■■■□□ 2
SURF1-205ENST00000615505 ADAMTS19Q8TE59 1207 aa27.53■■■□□ 2
SURF1-205ENST00000615505 SCFD1Q8WVM8 642 aa27.53■■■□□ 2
SURF1-205ENST00000615505 CBWD1Q9BRT8 395 aa27.53■■■□□ 2
SURF1-205ENST00000615505 FAM213AQ9BRX8 229 aa27.53■■■□□ 2
SURF1-205ENST00000615505 TUBGCP4Q9UGJ1 667 aa27.53■■■□□ 2
SURF1-205ENST00000615505 DERAQ9Y315 318 aa27.53■■■□□ 2
SURF1-205ENST00000615505 NUB1Q9Y5A7 615 aa27.53■■■□□ 2
SURF1-205ENST00000615505 IL18RAPO95256 599 aa27.52■■■□□ 2
SURF1-205ENST00000615505 HOXD13P35453 343 aa27.52■■■□□ 2
SURF1-205ENST00000615505 SNRPFP62306 86 aaKnown RBP27.52■■■□□ 2
SURF1-205ENST00000615505 SMAD4Q13485 552 aaKnown RBP27.52■■■□□ 2
SURF1-205ENST00000615505 TMEM132DQ14C87 1099 aa27.52■■■□□ 2
SURF1-205ENST00000615505 RTP2Q5QGT7 225 aa27.52■■■□□ 2
SURF1-205ENST00000615505 JADE1Q6IE81 842 aa27.52■■■□□ 2
SURF1-205ENST00000615505 CD300LGQ6UXG3 332 aa27.52■■■□□ 2
SURF1-205ENST00000615505 PDZRN4Q6ZMN7 1036 aaPredicted RBP27.52■■■□□ 2
SURF1-205ENST00000615505 C3orf58Q8NDZ4 430 aa27.52■■■□□ 2
SURF1-205ENST00000615505 BEST2Q8NFU1 509 aa27.52■■■□□ 2
SURF1-205ENST00000615505 SLC22A17Q8WUG5 538 aa27.52■■■□□ 2
SURF1-205ENST00000615505 SAAL1Q96ER3 474 aa27.52■■■□□ 2
SURF1-205ENST00000615505 COL25A1Q9BXS0 654 aaPredicted RBP27.52■■■□□ 2
SURF1-205ENST00000615505 PCIF1Q9H4Z3 704 aa27.52■■■□□ 2
SURF1-205ENST00000615505 FNIP2Q9P278 1114 aa27.52■■■□□ 2
SURF1-205ENST00000615505 TEX28O15482 410 aa27.51■■□□□ 1.99
SURF1-205ENST00000615505 MBTPS2O43462 519 aa27.51■■□□□ 1.99
SURF1-205ENST00000615505 EXTL3O43909 919 aa27.51■■□□□ 1.99
SURF1-205ENST00000615505 RPN1P04843 607 aaKnown RBP27.51■■□□□ 1.99
SURF1-205ENST00000615505 IGFBP6P24592 240 aaPredicted RBP27.51■■□□□ 1.99
SURF1-205ENST00000615505 LRPAP1P30533 357 aa27.51■■□□□ 1.99
SURF1-205ENST00000615505 NELFCDQ8IXH7 590 aa27.51■■□□□ 1.99
SURF1-205ENST00000615505 FMR1NBQ8N0W7 255 aaPredicted RBP27.51■■□□□ 1.99
SURF1-205ENST00000615505 SMRP1Q8NCR6 262 aa27.51■■□□□ 1.99
SURF1-205ENST00000615505 C2CD2Q9Y426 696 aa27.51■■□□□ 1.99
SURF1-205ENST00000615505 A0A0C4DFX4 3053 aa27.51■■□□□ 1.99
SURF1-205ENST00000615505 XIRP2A4UGR9 3374 aa27.51■■□□□ 1.99
SURF1-205ENST00000615505 IL9P15248 144 aa27.5■■□□□ 1.99
SURF1-205ENST00000615505 FGFR3P22607 806 aa27.5■■□□□ 1.99
SURF1-205ENST00000615505 BRCC3P46736 316 aa27.5■■□□□ 1.99
SURF1-205ENST00000615505 CLCN4P51793 760 aa27.5■■□□□ 1.99
SURF1-205ENST00000615505 BMT2Q1RMZ1 405 aa27.5■■□□□ 1.99
SURF1-205ENST00000615505 SPATA1Q5VX52 437 aa27.5■■□□□ 1.99
SURF1-205ENST00000615505 HS2ST1Q7LGA3 356 aa27.5■■□□□ 1.99
SURF1-205ENST00000615505 GPD1LQ8N335 351 aa27.5■■□□□ 1.99
SURF1-205ENST00000615505 NOC3LQ8WTT2 800 aaKnown RBP27.5■■□□□ 1.99
SURF1-205ENST00000615505 PIK3R5Q8WYR1 880 aa27.5■■□□□ 1.99
SURF1-205ENST00000615505 DZANK1Q9NVP4 752 aa27.5■■□□□ 1.99
SURF1-205ENST00000615505 PDCD11Q14690 1871 aaKnown RBP27.49■■□□□ 1.99
SURF1-205ENST00000615505 GOLGA8IPA6NC78 632 aa27.49■■□□□ 1.99
SURF1-205ENST00000615505 GOLGA8JA6NMD2 632 aa27.49■■□□□ 1.99
SURF1-205ENST00000615505 PRR29P0C7W0 189 aa27.49■■□□□ 1.99
SURF1-205ENST00000615505 EPCAMP16422 314 aa27.49■■□□□ 1.99
SURF1-205ENST00000615505 FAM160A1Q05DH4 1040 aa27.49■■□□□ 1.99
SURF1-205ENST00000615505 DPYDQ12882 1025 aa27.49■■□□□ 1.99
SURF1-205ENST00000615505 STK4Q13043 487 aa27.49■■□□□ 1.99
SURF1-205ENST00000615505 KNOP1Q1ED39 458 aaKnown RBP27.49■■□□□ 1.99
SURF1-205ENST00000615505 PRSS55Q6UWB4 352 aaPredicted RBP27.49■■□□□ 1.99
SURF1-205ENST00000615505 NT5DC4Q86YG4 428 aa27.49■■□□□ 1.99
SURF1-205ENST00000615505 UHRF1Q96T88 793 aaPredicted RBP27.49■■□□□ 1.99
SURF1-205ENST00000615505 KIAA1586Q9HCI6 787 aa27.49■■□□□ 1.99
SURF1-205ENST00000615505 RBAKQ9NYW8 714 aaPredicted RBP27.49■■□□□ 1.99
SURF1-205ENST00000615505 CGNQ9P2M7 1197 aaKnown RBP27.49■■□□□ 1.99
SURF1-205ENST00000615505 I3L4J1 428 aa27.48■■□□□ 1.99
SURF1-205ENST00000615505 TULP1O00294 542 aaPredicted RBP27.48■■□□□ 1.99
SURF1-205ENST00000615505 DLL1O00548 723 aa27.48■■□□□ 1.99
SURF1-205ENST00000615505 TGFB1I1O43294 461 aa27.48■■□□□ 1.99
SURF1-205ENST00000615505 NFICP08651 508 aa27.48■■□□□ 1.99
SURF1-205ENST00000615505 MCM4P33991 863 aa27.48■■□□□ 1.99
SURF1-205ENST00000615505 PSMD5Q16401 504 aa27.48■■□□□ 1.99
SURF1-205ENST00000615505 ELMSAN1Q6PJG2 1045 aa27.48■■□□□ 1.99
SURF1-205ENST00000615505 BRSK2Q8IWQ3 736 aa27.48■■□□□ 1.99
SURF1-205ENST00000615505 ZSWIM2Q8NEG5 633 aa27.48■■□□□ 1.99
SURF1-205ENST00000615505 LNX1Q8TBB1 728 aaPredicted RBP27.48■■□□□ 1.99
SURF1-205ENST00000615505 AGPAT3Q9NRZ7 376 aa27.48■■□□□ 1.99
SURF1-205ENST00000615505 HSPBP1Q9NZL4 362 aa27.48■■□□□ 1.99
SURF1-205ENST00000615505 DPP7Q9UHL4 492 aa27.48■■□□□ 1.99
SURF1-205ENST00000615505 SPDYE4A6NLX3 237 aa27.47■■□□□ 1.99
SURF1-205ENST00000615505 SYN3O14994 580 aa27.47■■□□□ 1.99
SURF1-205ENST00000615505 GLUD1P00367 558 aa27.47■■□□□ 1.99
SURF1-205ENST00000615505 C1RP00736 705 aa27.47■■□□□ 1.99
SURF1-205ENST00000615505 TKTP29401 623 aaKnown RBP27.47■■□□□ 1.99
SURF1-205ENST00000615505 SNW1Q13573 536 aaKnown RBP27.47■■□□□ 1.99
SURF1-205ENST00000615505 SMAD2Q15796 467 aaKnown RBP27.47■■□□□ 1.99
SURF1-205ENST00000615505 SYCE2Q6PIF2 218 aa27.47■■□□□ 1.99
SURF1-205ENST00000615505 ANKS3Q6ZW76 656 aa27.47■■□□□ 1.99
SURF1-205ENST00000615505 KIAA0895Q8NCT3 520 aa27.47■■□□□ 1.99
SURF1-205ENST00000615505 ENGASEQ8NFI3 743 aa27.47■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms