RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 CXCR5P32302 372 aa13.99□□□□□ -0.17
FOXN3-219ENST00000615335 MRPS35P82673 323 aaKnown RBP13.99□□□□□ -0.17
FOXN3-219ENST00000615335 PAK2Q13177 524 aa13.99□□□□□ -0.17
FOXN3-219ENST00000615335 IFI16Q16666 785 aaKnown RBP13.99□□□□□ -0.17
FOXN3-219ENST00000615335 SLC9C1Q4G0N8 1177 aa13.99□□□□□ -0.17
FOXN3-219ENST00000615335 SFMBT2Q5VUG0 894 aa13.99□□□□□ -0.17
FOXN3-219ENST00000615335 C1orf186Q6ZWK4 172 aa13.99□□□□□ -0.17
FOXN3-219ENST00000615335 MAATS1Q7Z4T9 603 aa13.99□□□□□ -0.17
FOXN3-219ENST00000615335 RNF10Q8N5U6 811 aaKnown RBP13.99□□□□□ -0.17
FOXN3-219ENST00000615335 HDAC7Q8WUI4 952 aa13.99□□□□□ -0.17
FOXN3-219ENST00000615335 HINFPQ9BQA5 517 aa13.99□□□□□ -0.17
FOXN3-219ENST00000615335 REEP2Q9BRK0 252 aa13.99□□□□□ -0.17
FOXN3-219ENST00000615335 POLD4Q9HCU8 107 aa13.99□□□□□ -0.17
FOXN3-219ENST00000615335 NLRC4Q9NPP4 1024 aa13.99□□□□□ -0.17
FOXN3-219ENST00000615335 NRBP2Q9NSY0 501 aa13.99□□□□□ -0.17
FOXN3-219ENST00000615335 DMGDHQ9UI17 866 aaKnown RBP13.99□□□□□ -0.17
FOXN3-219ENST00000615335 SALL4Q9UJQ4 1053 aa13.99□□□□□ -0.17
FOXN3-219ENST00000615335 ZNF233A6NK53 670 aa13.99□□□□□ -0.17
FOXN3-219ENST00000615335 SEPT4O43236 478 aa13.99□□□□□ -0.17
FOXN3-219ENST00000615335 NCK2O43639 380 aa13.99□□□□□ -0.17
FOXN3-219ENST00000615335 DIAPH2O60879 1101 aa13.99□□□□□ -0.17
FOXN3-219ENST00000615335 ZNF286BP0CG31 522 aa13.99□□□□□ -0.17
FOXN3-219ENST00000615335 GIT2Q14161 759 aa13.99□□□□□ -0.17
FOXN3-219ENST00000615335 LBRQ14739 615 aaKnown RBP13.99□□□□□ -0.17
FOXN3-219ENST00000615335 MTERF2Q49AM1 385 aa13.99□□□□□ -0.17
FOXN3-219ENST00000615335 BRDTQ58F21 947 aaPredicted RBP13.99□□□□□ -0.17
FOXN3-219ENST00000615335 HGSNATQ68CP4 663 aa13.99□□□□□ -0.17
FOXN3-219ENST00000615335 MAEAQ7L5Y9 396 aa13.99□□□□□ -0.17
FOXN3-219ENST00000615335 MYLK4Q86YV6 388 aaPredicted RBP13.99□□□□□ -0.17
FOXN3-219ENST00000615335 SLAIN1Q8ND83 568 aa13.99□□□□□ -0.17
FOXN3-219ENST00000615335 SYN2Q92777 582 aaPredicted RBP13.99□□□□□ -0.17
FOXN3-219ENST00000615335 CEP63Q96MT8 703 aa13.99□□□□□ -0.17
FOXN3-219ENST00000615335 TRIM4Q9C037 500 aa13.99□□□□□ -0.17
FOXN3-219ENST00000615335 CYP26B1Q9NR63 512 aa13.99□□□□□ -0.17
FOXN3-219ENST00000615335 ERAP1Q9NZ08 941 aa13.99□□□□□ -0.17
FOXN3-219ENST00000615335 KCND2Q9NZV8 630 aa13.99□□□□□ -0.17
FOXN3-219ENST00000615335 Q9Y3F1 56 aa13.99□□□□□ -0.17
FOXN3-219ENST00000615335 PTCH2Q9Y6C5 1203 aa13.99□□□□□ -0.17
FOXN3-219ENST00000615335 A6NJR5 290 aa13.98□□□□□ -0.17
FOXN3-219ENST00000615335 RBAK-RBAKDNI3L0D1 243 aa13.98□□□□□ -0.17
FOXN3-219ENST00000615335 DUSP11O75319 330 aaKnown RBP13.98□□□□□ -0.17
FOXN3-219ENST00000615335 SERPING1P05155 500 aa13.98□□□□□ -0.17
FOXN3-219ENST00000615335 PAEPP09466 180 aa13.98□□□□□ -0.17
FOXN3-219ENST00000615335 RARBP10826 455 aa13.98□□□□□ -0.17
FOXN3-219ENST00000615335 GRK4P32298 578 aa13.98□□□□□ -0.17
FOXN3-219ENST00000615335 CPT1AP50416 773 aa13.98□□□□□ -0.17
FOXN3-219ENST00000615335 SLC26A2P50443 739 aa13.98□□□□□ -0.17
FOXN3-219ENST00000615335 MXRA7P84157 204 aa13.98□□□□□ -0.17
FOXN3-219ENST00000615335 ACBD5Q5T8D3 534 aaPredicted RBP13.98□□□□□ -0.17
FOXN3-219ENST00000615335 CCDC65Q8IXS2 484 aa13.98□□□□□ -0.17
FOXN3-219ENST00000615335 AGAP11Q8TF27 550 aa13.98□□□□□ -0.17
FOXN3-219ENST00000615335 TEKT4Q8WW24 435 aa13.98□□□□□ -0.17
FOXN3-219ENST00000615335 LSM14BQ9BX40 385 aaKnown RBP13.98□□□□□ -0.17
FOXN3-219ENST00000615335 TLR10Q9BXR5 811 aa13.98□□□□□ -0.17
FOXN3-219ENST00000615335 LUC7LQ9NQ29 371 aaKnown RBP13.98□□□□□ -0.17
FOXN3-219ENST00000615335 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.98□□□□□ -0.175e-8■■■■■ 197.4
FOXN3-219ENST00000615335 SMARCAL1Q9NZC9 954 aa13.98□□□□□ -0.17
FOXN3-219ENST00000615335 BUB1O43683 1085 aa13.98□□□□□ -0.17
FOXN3-219ENST00000615335 CREB3O43889 395 aa13.98□□□□□ -0.17
FOXN3-219ENST00000615335 TBCAO75347 108 aaKnown RBP13.98□□□□□ -0.17
FOXN3-219ENST00000615335 GNA14O95837 355 aa13.98□□□□□ -0.17
FOXN3-219ENST00000615335 C6orf222P0C671 652 aaPredicted RBP13.98□□□□□ -0.17
FOXN3-219ENST00000615335 BEX3Q00994 111 aa13.98□□□□□ -0.17
FOXN3-219ENST00000615335 SLC7A5Q01650 507 aa13.98□□□□□ -0.17
FOXN3-219ENST00000615335 KLHDC7AQ5VTJ3 777 aa13.98□□□□□ -0.17
FOXN3-219ENST00000615335 FAM167AQ96KS9 214 aa13.98□□□□□ -0.17
FOXN3-219ENST00000615335 TBC1D7Q9P0N9 293 aa13.98□□□□□ -0.17
FOXN3-219ENST00000615335 WDR35Q9P2L0 1181 aa13.98□□□□□ -0.17
FOXN3-219ENST00000615335 SLC12A4Q9UP95 1085 aa13.98□□□□□ -0.17
FOXN3-219ENST00000615335 ASB3Q9Y575 518 aa13.98□□□□□ -0.17
FOXN3-219ENST00000615335 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.98□□□□□ -0.17
FOXN3-219ENST00000615335 CCT8L1PA6NM43 557 aa13.97□□□□□ -0.17
FOXN3-219ENST00000615335 SFI1A8K8P3 1242 aa13.97□□□□□ -0.17
FOXN3-219ENST00000615335 H3BRB1 525 aa13.97□□□□□ -0.17
FOXN3-219ENST00000615335 NOL4O94818 638 aa13.97□□□□□ -0.17
FOXN3-219ENST00000615335 INHAP05111 366 aa13.97□□□□□ -0.17
FOXN3-219ENST00000615335 SGSM1Q2NKQ1 1148 aa13.97□□□□□ -0.17
FOXN3-219ENST00000615335 HERC4Q5GLZ8 1057 aaPredicted RBP13.97□□□□□ -0.17
FOXN3-219ENST00000615335 ANKS4BQ8N8V4 417 aa13.97□□□□□ -0.17
FOXN3-219ENST00000615335 ATP8B4Q8TF62 1192 aa13.97□□□□□ -0.17
FOXN3-219ENST00000615335 C16orf70Q9BSU1 422 aa13.97□□□□□ -0.17
FOXN3-219ENST00000615335 RNPEPQ9H4A4 650 aa13.97□□□□□ -0.17
FOXN3-219ENST00000615335 TUT1Q9H6E5 874 aaKnown RBP13.97□□□□□ -0.17
FOXN3-219ENST00000615335 EHD2Q9NZN4 543 aa13.97□□□□□ -0.17
FOXN3-219ENST00000615335 G3BP2Q9UN86 482 aaKnown RBP13.97□□□□□ -0.17
FOXN3-219ENST00000615335 RSPH10B2B2RC85 870 aa13.96□□□□□ -0.17
FOXN3-219ENST00000615335 ECEL1O95672 775 aa13.96□□□□□ -0.17
FOXN3-219ENST00000615335 CLTAP09496 248 aa13.96□□□□□ -0.17
FOXN3-219ENST00000615335 RSPH10BP0C881 870 aa13.96□□□□□ -0.17
FOXN3-219ENST00000615335 POLR2FP61218 127 aaKnown RBP13.96□□□□□ -0.17
FOXN3-219ENST00000615335 MRPS25P82663 173 aaKnown RBP13.96□□□□□ -0.17
FOXN3-219ENST00000615335 FSCN1Q16658 493 aaKnown RBP13.96□□□□□ -0.17
FOXN3-219ENST00000615335 MAP3K21Q5TCX8 1036 aa13.96□□□□□ -0.17
FOXN3-219ENST00000615335 C8orf74Q6P047 294 aa13.96□□□□□ -0.17
FOXN3-219ENST00000615335 LRIG3Q6UXM1 1119 aa13.96□□□□□ -0.17
FOXN3-219ENST00000615335 NELFCDQ8IXH7 590 aa13.96□□□□□ -0.17
FOXN3-219ENST00000615335 IFT20Q8IY31 132 aa13.96□□□□□ -0.17
FOXN3-219ENST00000615335 NIFKQ9BYG3 293 aaKnown RBP13.96□□□□□ -0.17
FOXN3-219ENST00000615335 SPC25Q9HBM1 224 aa13.96□□□□□ -0.17
FOXN3-219ENST00000615335 L3MBTL1Q9Y468 752 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms