RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 CATSPER4Q7RTX7 472 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 BRSK2Q8IWQ3 736 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 ABRAQ8N0Z2 381 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 IFT81Q8WYA0 676 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 VTI1AQ96AJ9 217 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 CGRRF1Q99675 332 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 C11orf70Q9BRQ4 267 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 SYT11Q9BT88 431 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 AP5M1Q9H0R1 490 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 FZD8Q9H461 694 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 ZFYVE28Q9HCC9 887 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 ARGLU1Q9NWB6 273 aaPredicted RBP3.69□□□□□ -1.82
LIG4-205ENST00000614526 SLC5A4Q9NY91 659 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 KCNG1Q9UIX4 513 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 NOCTQ9UK39 431 aaKnown RBP3.69□□□□□ -1.82
LIG4-205ENST00000614526 CPSF3Q9UKF6 684 aaKnown RBP3.69□□□□□ -1.82
LIG4-205ENST00000614526 USTQ9Y2C2 406 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 SLC45A1Q9Y2W3 748 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 COQ4Q9Y3A0 265 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 STYXL1Q9Y6J8 313 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 WDR81Q562E7 1941 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 SCN4AP35499 1836 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 LOC285556D6RIA3 1793 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 ANKRD62A6NC57 917 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 ABLIM1O14639 778 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 POLR3GO15318 223 aaPredicted RBP3.68□□□□□ -1.82
LIG4-205ENST00000614526 FAM189A1O60320 539 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 SASH3O75995 380 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 KIF4AO95239 1232 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 NPTXRO95502 500 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 HOXC6P09630 235 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 ZNF865P0CJ78 1059 aaPredicted RBP3.68□□□□□ -1.82
LIG4-205ENST00000614526 ITGA4P13612 1032 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 TCP1P17987 556 aaKnown RBP3.68□□□□□ -1.82
LIG4-205ENST00000614526 RRM1P23921 792 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 BRD2P25440 801 aaKnown RBP3.68□□□□□ -1.82
LIG4-205ENST00000614526 GNA15P30679 374 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 FLT3LGP49771 235 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 FAM193AP78312 1265 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 GPC5P78333 572 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 AMHR2Q16671 573 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 ZNF699Q32M78 642 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 MORN1Q5T089 497 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 CDCA2Q69YH5 1023 aaPredicted RBP3.68□□□□□ -1.82
LIG4-205ENST00000614526 CC2D1AQ6P1N0 951 aaPredicted RBP3.68□□□□□ -1.82
LIG4-205ENST00000614526 C15orf39Q6ZRI6 1047 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 TXLNBQ8N3L3 684 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 RBBP8NLQ8NC74 664 aaPredicted RBP3.68□□□□□ -1.82
LIG4-205ENST00000614526 RFFLQ8WZ73 363 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 KRT35Q92764 455 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 KAT2BQ92831 832 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 JPH2Q9BR39 696 aaPredicted RBP3.68□□□□□ -1.82
LIG4-205ENST00000614526 NUP85Q9BW27 656 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 EIF2AQ9BY44 585 aaKnown RBP3.68□□□□□ -1.82
LIG4-205ENST00000614526 TRIM31Q9BZY9 425 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 C2orf40Q9H1Z8 148 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 ZCCHC17Q9NP64 241 aaKnown RBP3.68□□□□□ -1.82
LIG4-205ENST00000614526 SNTG2Q9NY99 539 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 CACNG4Q9UBN1 327 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 CNOT8Q9UFF9 292 aaKnown RBP3.68□□□□□ -1.82
LIG4-205ENST00000614526 NR2E1Q9Y466 385 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 PCDHGC5Q9Y5F6 944 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 ALG6Q9Y672 507 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 MAGEB2O15479 319 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 MEFVO15553 781 aaPredicted RBP3.68□□□□□ -1.82
LIG4-205ENST00000614526 ZEB2O60315 1214 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 TRPA1O75762 1119 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 PIGRP01833 764 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 TNNC2P02585 160 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 CLTAP09496 248 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 TMEM253P0C7T8 217 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 GTF2H1P32780 548 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 CDR2Q01850 454 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 CKAP4Q07065 602 aaKnown RBP3.68□□□□□ -1.82
LIG4-205ENST00000614526 MCL1Q07820 350 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 NFX1Q12986 1120 aaKnown RBP3.68□□□□□ -1.82
LIG4-205ENST00000614526 MFSD10Q14728 455 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 LONRF2Q1L5Z9 754 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 CFAP221Q4G0U5 840 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 ZFYVE27Q5T4F4 411 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 TSHZ1Q6ZSZ6 1077 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 NT5DC3Q86UY8 548 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 LRRC57Q8N9N7 239 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 TMEM40Q8WWA1 233 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 TRIM6Q9C030 488 aaPredicted RBP3.68□□□□□ -1.82
LIG4-205ENST00000614526 MAF1Q9H063 256 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 DDX47Q9H0S4 455 aaKnown RBP3.68□□□□□ -1.82
LIG4-205ENST00000614526 PDZD7Q9H5P4 517 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 ARFGAP3Q9NP61 516 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 CISHQ9NSE2 258 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 PRMT7Q9NVM4 692 aaPredicted RBP3.68□□□□□ -1.82
LIG4-205ENST00000614526 GJD2Q9UKL4 321 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 AMFRQ9UKV5 643 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 AGAP1Q9UPQ3 857 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 RBM47A0AV96 593 aaKnown RBP3.68□□□□□ -1.82
LIG4-205ENST00000614526 PPEF2O14830 753 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 SPOPO43791 374 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 RRP9O43818 475 aaKnown RBP3.68□□□□□ -1.82
LIG4-205ENST00000614526 TSPAN1O60635 241 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 RTN2O75298 545 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms