RNA–Protein interactions for RNA: ENST00000614428.4

ACACA-231, Transcript of acetyl-CoA carboxylase alpha, human

APPRIS P1 TSL 1 (best) BASIC

Gene ACACA, Length 9,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACACA-231	ENST00000614428	BLOC1S4	Q9NUP1	217 aa		7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	TPX2	Q9ULW0	747 aa	Known RBP	7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	GAK	O14976	1311 aa		7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	AFF2	P51816	1311 aa		7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	UBR3	Q6ZT12	1888 aa		7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	SERPINB2	P05120	415 aa		7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	VHL	P40337	213 aa		7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	ERVK-9	P63128	1117 aa		7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	TNFAIP2	Q03169	654 aa		7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	CCNG2	Q16589	344 aa		7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	TTMP	Q5BVD1	217 aa		7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	HGSNAT	Q68CP4	663 aa		7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	PLCD3	Q8N3E9	789 aa		7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	TRIM15	Q9C019	465 aa		7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	GLI3	P10071	1580 aa		7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	PHF20L1	A8MW92	1017 aa		7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	USP17L10	C9JJH3	530 aa		7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	MTA2	O94776	668 aa		7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	APOA4	P06727	396 aa		7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	ADAT2	Q7Z6V5	191 aa	Known RBP	7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	LRRC57	Q8N9N7	239 aa		7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	KRT35	Q92764	455 aa		7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	NRBF2	Q96F24	287 aa		7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	STN1	Q9H668	368 aa	Known RBP	7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	CDY2A	Q9Y6F7	541 aa		7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	CDY1	Q9Y6F8	540 aa		7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	GREB1L	Q9C091	1923 aa	Predicted RBP	7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	ARHGAP42	A6NI28	874 aa		7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	AKAP3	O75969	853 aa		7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	SNHG28	P0DPA3	235 aa		7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	NLRP11	P59045	1033 aa	Known RBP	7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	LACTB2	Q53H82	288 aa	Predicted RBP	7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	HACE1	Q8IYU2	909 aa		7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	GDAP1	Q8TB36	358 aa		7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	GAN	Q9H2C0	597 aa		7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	AHDC1	Q5TGY3	1603 aa	Predicted RBP	7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	MYO16	Q9Y6X6	1858 aa		7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	XPOT	O43592	962 aa	Known RBP	7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	KLHL2	O95198	593 aa		7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	CD19	P15391	556 aa		7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	FGFR4	P22455	802 aa		7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	STIP1	P31948	543 aa	Known RBP	7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	GCLM	P48507	274 aa		7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	MYL6	P60660	151 aa		7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	FKBP1C	Q5VVH2	108 aa		7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	SLFN11	Q7Z7L1	901 aa		7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	ZCCHC9	Q8N567	271 aa	Known RBP	7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	OSBPL1A	Q9BXW6	950 aa		7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	RANBP17	Q9H2T7	1088 aa	Known RBP	7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	PCDHA10	Q9Y5I2	948 aa		7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	KNL1	Q8NG31	2342 aa		7.03	□□□□□ -1.28
ACACA-231	ENST00000614428		F5H6K3	240 aa		7.03	□□□□□ -1.28
ACACA-231	ENST00000614428		K7ERI5	159 aa		7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	IGF2BP3	O00425	579 aa	Known RBP eCLIP	7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	TLR3	O15455	904 aa	Known RBP	7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	EXTL3	O43909	919 aa		7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	IL18RAP	O95256	599 aa		7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	CYP11B1	P15538	503 aa		7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	GNA15	P30679	374 aa		7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	CIITA	P33076	1130 aa		7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	KLRC3	Q07444	240 aa		7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	PTK6	Q13882	451 aa		7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	PARP6	Q2NL67	630 aa		7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	PPIL6	Q8IXY8	311 aa		7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	THNSL1	Q8IYQ7	743 aa		7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	DNAJC9	Q8WXX5	260 aa		7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	RIN2	Q8WYP3	895 aa	Predicted RBP	7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	THOC1	Q96FV9	657 aa	Known RBP	7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	CEP170P1	Q96L14	293 aa		7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	ADPGK	Q9BRR6	497 aa		7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	TMEM59L	Q9UK28	342 aa		7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	UST	Q9Y2C2	406 aa		7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	PCDHA3	Q9Y5H8	950 aa		7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	ZFC3H1	O60293	1989 aa	Known RBP	7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	HOXA10	P31260	410 aa	Predicted RBP	7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	PLS1	Q14651	629 aa		7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	SEC14L1	Q92503	715 aa		7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	FGD4	Q96M96	766 aa		7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	CCDC68	Q9H2F9	335 aa		7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	SLC9A2	Q9UBY0	812 aa		7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	ZBTB21	Q9ULJ3	1066 aa		7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	REXO2	Q9Y3B8	237 aa	Known RBP	7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	NEU2	Q9Y3R4	380 aa		7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	ARHGEF37	A1IGU5	675 aa		7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	PFDN6	O15212	129 aa		7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	RFC5	P40937	340 aa		7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	MXD4	Q14582	209 aa	Predicted RBP	7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	ADRM1	Q16186	407 aa		7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	FAM98C	Q17RN3	349 aa	Known RBP	7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	RTKN2	Q8IZC4	609 aa		7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	NSMCE1	Q8WV22	266 aa		7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	KCTD10	Q9H3F6	313 aa		7.03	□□□□□ -1.28
ACACA-231	ENST00000614428	POC1B-GALNT4	F8VUJ3	575 aa		7.02	□□□□□ -1.28
ACACA-231	ENST00000614428	MX2	P20592	715 aa		7.02	□□□□□ -1.28
ACACA-231	ENST00000614428	COMT	P21964	271 aa		7.02	□□□□□ -1.28
ACACA-231	ENST00000614428	CRK	P46108	304 aa		7.02	□□□□□ -1.28
ACACA-231	ENST00000614428	ACAP1	Q15027	740 aa		7.02	□□□□□ -1.28
ACACA-231	ENST00000614428	E2F5	Q15329	346 aa		7.02	□□□□□ -1.28
ACACA-231	ENST00000614428	KATNAL2	Q8IYT4	538 aa		7.02	□□□□□ -1.28
ACACA-231	ENST00000614428	SH3TC2	Q8TF17	1288 aa		7.02	□□□□□ -1.28

Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms